CN188827
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: IDH5_ARATH (Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial OS=Arabidopsis thaliana GN=IDH5 PE=1 SV=1) HSP 1 Score: 429.869 bits (1104), Expect = 7.312e-120 Identity = 214/236 (90.68%), Postives = 221/236 (93.64%), Query Frame = 1 Query: 43 LLGSRSRQILSATNPNPNLALPIARAFSSDITPITATLFPGDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDN 750 L+G+RS QIL A N + A +ARAF S TPITATLFPGDGIGPEIAESVK+VF TA VP+EWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDV+LITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAF YAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDN Sbjct: 11 LIGNRSTQILGAVNSSSGAASSVARAFCSSTTPITATLFPGDGIGPEIAESVKKVFTTAGVPIEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVDLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFLYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDN 246
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: LEU3_SOLTU (3-isopropylmalate dehydrogenase, chloroplastic OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 401.364 bits (1030), Expect = 2.785e-111 Identity = 197/214 (92.06%), Postives = 204/214 (95.33%), Query Frame = 1 Query: 115 RAFSSDITP--ITATLFPGDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDN 750 R F+S+ I ATLFPGDGIGPEIAESV+Q+F+ AEVP+EWEEHYVGTE+DPRT SFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEI YEEVVIDN Sbjct: 26 RTFTSESNSNLIRATLFPGDGIGPEIAESVRQIFKVAEVPIEWEEHYVGTEVDPRTNSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIKYEEVVIDN 239
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: IDH6_ARATH (Isocitrate dehydrogenase [NAD] catalytic subunit 6, mitochondrial OS=Arabidopsis thaliana GN=IDH6 PE=1 SV=2) HSP 1 Score: 382.489 bits (981), Expect = 1.339e-105 Identity = 186/236 (78.81%), Postives = 212/236 (89.83%), Query Frame = 1 Query: 43 LLGSRSRQILSATNPNPNLALPIARAFSSDITPITATLFPGDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDN 750 L+G+ S QIL ++ + + ++RAF S TPI ATLFPGDGIGPEIAESVKQVF A+V ++W+E +VGTE+DPRT SFLTW++L+SV +NKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDV+LITIRENTEGEYSGLEHQVV+GVVESLKIITR+AS+RVAEYAF YAKTHGR++VSAIHKANIMQKTDGLFL+CC EVA KYPEI YE+VVIDN Sbjct: 11 LIGNGSSQILGTSSSSSGPFISVSRAFFSSSTPIKATLFPGDGIGPEIAESVKQVFTAADVVIDWDEQFVGTEVDPRTNSFLTWDNLQSVLKNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVDLITIRENTEGEYSGLEHQVVKGVVESLKIITRKASMRVAEYAFLYAKTHGRKKVSAIHKANIMQKTDGLFLQCCDEVAAKYPEIYYEKVVIDN 246
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: IDH3A_DROME (Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Drosophila melanogaster GN=l(1)G0156 PE=2 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.184e-69 Identity = 131/237 (55.27%), Postives = 177/237 (74.68%), Query Frame = 1 Query: 43 LLGSRSRQILSATNPNPNL-ALPIA-RAFSSDITPITATLFPGDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVID 747 L+ +R ++AT + A P A R++SS +T L PGDGIGPEI+ +V+++F A VP+EWE V P + + +++SV NK+GLKGP+ TP+GKGHRSLNL LRKE NLYANVRPC SL GYKT YDDV+++TIRENTEGEYSG+EH++V GVV+S+K+IT +AS RVAEYAF YAK + R++V+ +HKANIM+ +DGLFL+C R++A+K+PEI +EE +D Sbjct: 15 LIAARDAPAVTATPAVSQVNATPAASRSYSSGTKKVT--LIPGDGIGPEISAAVQKIFTAANVPIEWEAVDVTPVRGPDGKFGIPQAAIDSVNTNKIGLKGPLMTPVGKGHRSLNLALRKEFNLYANVRPCRSLEGYKTLYDDVDVVTIRENTEGEYSGIEHEIVDGVVQSIKLITEEASKRVAEYAFQYAKNNNRKKVTVVHKANIMRMSDGLFLRCVRDMAQKFPEIQFEEKYLD 249
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: IDHA_DICDI (Isocitrate dehydrogenase [NAD] regulatory subunit A, mitochondrial OS=Dictyostelium discoideum GN=idhA PE=3 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.232e-68 Identity = 124/213 (58.22%), Postives = 166/213 (77.93%), Query Frame = 1 Query: 115 RAFSSDITPIT-ATLFPGDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDN 750 R +SS + I TL PGDGIGPEI+ESVK+VF + P+EWE +D T ++ E +ES+ +NK+GLKGP++TPIG GH+SLNL LRK NLYAN+RPC S+PG+KTRY++VN + +RENTEGEYSG+E+Q V+GV +S+KIIT++AS R+A YAF YA +GR++V+ IHKANIM+++DGLF+K CREV+ +YP I YEE+ IDN Sbjct: 14 RNYSSSTSKIQKVTLIPGDGIGPEISESVKRVFSAVKAPIEWET----VVVDANTG--ISKEVIESISKNKIGLKGPISTPIGTGHQSLNLGLRKTFNLYANIRPCLSIPGHKTRYNNVNTVVVRENTEGEYSGIENQPVKGVAQSIKIITKEASTRIAHYAFQYALANGRKKVTCIHKANIMKQSDGLFVKSCREVSTRYPSIKYEELTIDN 220
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: IDH2_SCHPO (Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial OS=Schizosaccharomyces pombe GN=idh2 PE=1 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 3.688e-63 Identity = 114/202 (56.44%), Postives = 154/202 (76.24%), Query Frame = 1 Query: 145 TATLFPGDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDN 750 T T+ GDGIGPEIA+SV+++F+ A+VP+EWE V + T + + ++ ESVR+NKV LKGP+ATPIGKGH S+NLTLR+ L+ANVRPC S+ GYKT YD+VN + IRENTEGEYSG+EH+V+ GVV+S+K+ITR AS RV YAF YA+ G+ ++ +HKA IM+ DGLFL+C +E+A +YP+I E ++DN Sbjct: 47 TVTMIAGDGIGPEIAQSVERIFKAAKVPIEWERVKVYPILKNGTTT-IPDDAKESVRKNKVALKGPLATPIGKGHVSMNLTLRRTFGLFANVRPCVSITGYKTPYDNVNTVLIRENTEGEYSGIEHEVIPGVVQSIKLITRAASERVIRYAFQYARQTGKNNITVVHKATIMRMADGLFLECAKELAPEYPDIELREEILDN 247
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: IDH3A_MOUSE (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Mus musculus GN=Idh3a PE=1 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 4.817e-63 Identity = 116/213 (54.46%), Postives = 156/213 (73.24%), Query Frame = 1 Query: 109 IARAFSSDITPITATLFPGDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVID 747 + R F+ + T TL PGDGIGPEI+ SV ++F A+ P++WEE V P + + E+ ES+ +NK+GLKGP+ TPI GH S+NL LRK +LYANVRPC S+ GYKT Y DVN++TIRENTEGEYSG+EH +V GVV+S+K+IT +AS R+AE+AF YA+ + R V+A+HKANIM+ +DGLFL+ CREVAE +I + E+ +D Sbjct: 23 VTRGFAGGVQ--TVTLIPGDGIGPEISASVMKIFDAAKAPIQWEERNVTAIQGPGGKWMIPPEAKESMDKNKMGLKGPLKTPIAAGHPSMNLLLRKTFDLYANVRPCVSIEGYKTPYTDVNIVTIRENTEGEYSGIEHVIVDGVVQSIKLITEEASKRIAEFAFEYARNNHRSNVTAVHKANIMRMSDGLFLQKCREVAENCKDIKFNEMYLD 233
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: IDH3A_RAT (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus GN=Idh3a PE=1 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.402e-62 Identity = 116/213 (54.46%), Postives = 155/213 (72.77%), Query Frame = 1 Query: 109 IARAFSSDITPITATLFPGDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVID 747 + R F+ + T TL PGDGIGPEI+ SV ++F A+ P++WEE V P + + E+ ES+ +NK+GLKGP+ TPI GH S+NL LRK +LYANVRPC S+ GYKT Y DVN++TIRENTEGEYSG+EH +V GVV+S+K+IT AS R+AE+AF YA+ + R V+A+HKANIM+ +DGLFL+ CREVAE +I + E+ +D Sbjct: 23 VTRGFAGGVQ--TVTLIPGDGIGPEISASVMKIFDAAKAPIQWEERNVTAIQGPGGKWMIPPEAKESMDKNKMGLKGPLKTPIAAGHPSMNLLLRKTFDLYANVRPCVSIEGYKTPYTDVNIVTIRENTEGEYSGIEHVIVDGVVQSIKLITEGASKRIAEFAFEYARNNHRSNVTAVHKANIMRMSDGLFLQKCREVAENCKDIKFNEMYLD 233
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: IDH3A_BOVIN (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Bos taurus GN=IDH3A PE=1 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.402e-62 Identity = 115/213 (53.99%), Postives = 155/213 (72.77%), Query Frame = 1 Query: 109 IARAFSSDITPITATLFPGDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVID 747 + R F+ + T TL PGDGIGPEI+ +V ++F A+ P++WEE V P + + E+ ES+ +NK+GLKGP+ TPI GH S+NL LRK +LYANVRPC S+ GYKT Y DVN++TIRENTEGEYSG+EH +V GVV+S+K+IT AS R+AE+AF YA+ + R V+A+HKANIM+ +DGLFL+ CREVAE +I + E+ +D Sbjct: 23 VTRGFAGGVK--TVTLIPGDGIGPEISAAVMKIFDAAKAPIQWEERNVAAIQGPGGKWMIPPEAKESMDKNKMGLKGPLKTPIAAGHPSMNLLLRKTFDLYANVRPCVSIEGYKTPYHDVNIVTIRENTEGEYSGIEHVIVDGVVQSIKLITEAASKRIAEFAFEYARNNHRSNVTAVHKANIMRMSDGLFLQKCREVAENCKDIKFNEMYLD 233
BLAST of CN188827 vs. ExPASy Swiss-Prot
Match: IDH3A_PONAB (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Pongo abelii GN=IDH3A PE=2 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.391e-62 Identity = 115/213 (53.99%), Postives = 155/213 (72.77%), Query Frame = 1 Query: 109 IARAFSSDITPITATLFPGDGIGPEIAESVKQVFRTAEVPVEWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVID 747 + R F+ + T TL PGDGIGPEI+ +V ++F A+ P++WEE V P + + E+ ES+ +NK+GLKGP+ TPI GH S+NL LRK +LYANVRPC S+ GYKT Y DVN++TIRENTEGEYSG+EH +V GVV+S+K+IT AS R+AE+AF YA+ + R V+A+HKANIM+ +DGLFL+ CREVAE +I + E+ +D Sbjct: 23 VTRGFTGGVQ--TVTLIPGDGIGPEISAAVMKIFDAAKAPIQWEERNVTAIQGPGGKWMIPSEAKESMDKNKMGLKGPLKTPIAAGHPSMNLLLRKTFDLYANVRPCVSIEGYKTPYTDVNIVTIRENTEGEYSGIEHVIVDGVVQSIKLITEGASKRIAEFAFEYARNNHRSNVTAVHKANIMRMSDGLFLQKCREVAENCKDIKFNEMYLD 233 The following BLAST results are available for this feature:
BLAST of CN188827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188827 ID=CN188827; Name=CN188827; organism=Citrus sinensis; type=EST; length=751bpback to top |