CN188816
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188816 vs. ExPASy Swiss-Prot
Match: SKIP2_ARATH (F-box protein SKIP2 OS=Arabidopsis thaliana GN=SKIP2 PE=1 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 7.019e-74 Identity = 142/222 (63.96%), Postives = 177/222 (79.73%), Query Frame = 2 Query: 50 MGQTPSTAIDPSDR---FNILSPAIVSN-DGVEFSDELDKARDFTGDLPDDCLAYIFQFLGSGDRKRCSLVCKRWLRVDGGSRYRLSLNAQSEILSSLPSVFSRFDSVTKLALRCDRKSISLDDDALVLISLRCQKLTRLKLRGCREITDHGMVAFAQNCKTLKKLSCGSCMFGAKAINSVLDHCELLEELSIKRLRGIHDGADPIQ-PGAAAALSLKSICL 700 MGQ PS+ + + R + SP IV+ + + + +D RDFTGDLPD+CLA++FQFLG+GDRKRCSLVCKRWL VDG SR+RLSL+A+ EI S L S+F+RFDSVTKLALRCDRKS+SL D+AL +IS+RC LTR+KLRGCREITD GM FA+NCK LKKLS GSC FGAK +N++L+HC+LLEELS+KRLRGIH+ A+ I P A++ SL+SICL Sbjct: 1 MGQAPSSTAESNGRELDLRLWSPVIVAGGESMAVGNVVD--RDFTGDLPDECLAHVFQFLGAGDRKRCSLVCKRWLLVDGQSRHRLSLDAKDEISSFLTSMFNRFDSVTKLALRCDRKSVSLSDEALAMISVRCLNLTRVKLRGCREITDLGMEDFAKNCKNLKKLSVGSCNFGAKGVNAMLEHCKLLEELSVKRLRGIHEAAELIHLPDDASSSSLRSICL 220
BLAST of CN188816 vs. ExPASy Swiss-Prot
Match: FBL16_ARATH (F-box/LRR-repeat protein 16 OS=Arabidopsis thaliana GN=FBL16 PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 6.149e-70 Identity = 133/220 (60.45%), Postives = 172/220 (78.18%), Query Frame = 2 Query: 50 MGQTPSTAIDPSDRFNIL---SPAIVSNDGVEFSDELDKARDFTGDLPDDCLAYIFQFLGSGDRKRCSLVCKRWLRVDGGSRYRLSLNAQSEILSSLPSVFSRFDSVTKLALRCDRKSISLDDDALVLISLRCQKLTRLKLRGCREITDHGMVAFAQNCKTLKKLSCGSCMFGAKAINSVLDHCELLEELSIKRLRGIHDGADPIQPGAAAALSLKSICL 700 MGQ PS+ +P+ R L SP + + + F D DFT +LPDDCLA+IFQFL +GDRKRCSLV KRWL VDG +R+RLSL+A+SEIL LP +F+RFDSVTKLALRCDR+S SL D+AL ++S+RC L R+KLRGCREITD GM +FA+NCK+L+KLSCGSC FGAK IN++L+HC++LEELS+KR+RG+H+ A+PI+ +A SL+S+ L Sbjct: 1 MGQAPSSPAEPNVRDTSLCLWSPEFLDCESIGFEDG---DYDFTANLPDDCLAHIFQFLSAGDRKRCSLVSKRWLLVDGQNRHRLSLDAKSEILPFLPCIFNRFDSVTKLALRCDRRSFSLSDEALFIVSIRCSNLIRVKLRGCREITDLGMESFARNCKSLRKLSCGSCTFGAKGINAMLEHCKVLEELSLKRIRGLHELAEPIKLSLSA--SLRSVFL 215
BLAST of CN188816 vs. ExPASy Swiss-Prot
Match: FB37_ARATH (F-box protein At1g47056 OS=Arabidopsis thaliana GN=At1g47056 PE=2 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 4.560e-65 Identity = 121/180 (67.22%), Postives = 151/180 (83.89%), Query Frame = 2 Query: 164 DFTGDLPDDCLAYIFQFLGSGDRKRCSLVCKRWLRVDGGSRYRLSLNAQSEILSSLPSVFSRFDSVTKLALRCDRKSISLDDDALVLISLRCQKLTRLKLRGCREITDHGMVAFAQNCKTLKKLSCGSCMFGAKAINSVLDHCELLEELSIKRLRGIHDGA-DPIQPGAAAALSLKSICL 700 D+T LPD+CLA +FQFL SG+RKRC+LVC+RW+ V+G +RYRLSL+A+S++++S+PS+FSRFDSVTKL+L+CDR+S+S+ D+ALV ISLRC+ L RLKLR CRE+TD GM AFA+NCK LK SCGSC FGAK + +VLDHC LEELSIKRLRG D A + I PG AA+ SLKSICL Sbjct: 38 DYTSSLPDECLALVFQFLNSGNRKRCALVCRRWMIVEGQNRYRLSLHARSDLITSIPSLFSRFDSVTKLSLKCDRRSVSIGDEALVKISLRCRNLKRLKLRACRELTDVGMAAFAENCKDLKIFSCGSCDFGAKGVKAVLDHCSNLEELSIKRLRGFTDIAPEMIGPGVAAS-SLKSICL 216
BLAST of CN188816 vs. ExPASy Swiss-Prot
Match: FBL8_ARATH (Putative F-box/LRR-repeat protein 8 OS=Arabidopsis thaliana GN=FBL8 PE=2 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 7.796e-57 Identity = 108/183 (59.02%), Postives = 143/183 (78.14%), Query Frame = 2 Query: 152 DKARDFTGDLPDDCLAYIFQFLGSGDRKRCSLVCKRWLRVDGGSRYRLSLNAQSEILSSLPSVFSRFDSVTKLALRCDRKSISLDDDALVLISLRCQKLTRLKLRGCREITDHGMVAFAQNCKTLKKLSCGSCMFGAKAINSVLDHCELLEELSIKRLRGIHDGADPIQPGAAAALSLKSICL 700 D+ D+ +LPD+CL+ IFQ L D KRCSLVC+RWL ++G R+RLSL AQS+++S +PS+F+RFDSVTKL LR DR+S+ + D+A V+IS+RC+ LTRLKLRGC EI+D G++ F +NC++LKK+S GSC FG K +N++L+ C LEELS+KRLRGI GA+ I PG AA SLK ICL Sbjct: 68 DEPYDYISNLPDECLSLIFQSLTCADLKRCSLVCRRWLTIEGQCRHRLSLKAQSDLISVIPSLFTRFDSVTKLVLRSDRRSLGICDNAFVMISVRCRNLTRLKLRGCPEISDLGIIGFTENCRSLKKVSFGSCGFGVKGMNALLNTCLGLEELSVKRLRGIGAGAELIGPGGAAG-SLKVICL 249 The following BLAST results are available for this feature:
BLAST of CN188816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188816 ID=CN188816; Name=CN188816; organism=Citrus sinensis; type=EST; length=700bpback to top |