CN188813

Overview
NameCN188813
Unique NameCN188813
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1723..2425. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALF_ORYSJ (Fructose-bisphosphate aldolase cytoplasmic isozyme OS=Oryza sativa subsp. japonica GN=FBA PE=1 SV=2)

HSP 1 Score: 236.498 bits (602), Expect = 1.060e-61
Identity = 115/135 (85.19%), Postives = 127/135 (94.07%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVTPGS+A KV+P+VIAE+TVR LQRT+PAAVPA+VFLSGGQSEEEAT NLNAMN+L TKKPWSLSFSFGRALQQSTLKAW+GK EN++KA+A FL RCKANSEATLGTYKGDA LGEGA+ESLHVKDYKY
Sbjct:  224 LKPNMVTPGSDAKKVSPEVIAEYTVRTLQRTVPAAVPAIVFLSGGQSEEEATLNLNAMNKLSTKKPWSLSFSFGRALQQSTLKAWSGKAENIEKARAAFLTRCKANSEATLGTYKGDAVLGEGASESLHVKDYKY 358          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALF_CICAR (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Cicer arietinum GN=ALDC PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.611e-60
Identity = 113/135 (83.70%), Postives = 126/135 (93.33%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVTPGS++PKV P+V+AEHTVRALQRT+PAAVPAVVFLSGGQSEEEAT NLNA+NQ+K KKPW+LSFSFGRALQQSTLKAW+GKEENV+ AQ   L R KANSEATLGTYKG++QLGEGA+ESLHVKDYKY
Sbjct:  225 LKPNMVTPGSDSPKVAPEVVAEHTVRALQRTVPAAVPAVVFLSGGQSEEEATVNLNAINQVKGKKPWTLSFSFGRALQQSTLKAWSGKEENVKNAQDALLTRAKANSEATLGTYKGNSQLGEGASESLHVKDYKY 359          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALF2_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 2 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 7.110e-58
Identity = 111/135 (82.22%), Postives = 121/135 (89.63%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVTPGS+APKV P+VIAEHTVRALQRT+PAAVPAVVFLSGGQSEEEA+ NLNA+NQ+K KKPW+LSFSFGRALQQSTLKAW GK ENV+ AQ   L R KANSEATLGTYKG + LG GA+ESLHVKDYKY
Sbjct:  225 LKPNMVTPGSDAPKVAPEVIAEHTVRALQRTVPAAVPAVVFLSGGQSEEEASVNLNAINQIKGKKPWTLSFSFGRALQQSTLKAWGGKTENVKAAQDALLTRAKANSEATLGTYKGASNLGAGASESLHVKDYKY 359          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALF_MAIZE (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Zea mays PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.019e-57
Identity = 111/135 (82.22%), Postives = 121/135 (89.63%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVTPGS++ KVTP+VIAE+TVR LQRT+PAAVPAV+FLSGGQSEEEATRNLNAMN+L TKKPWSLSFSFGRALQ STLKAWAGK EN++KA+A FL RCKANSEATLGTYKGDA       ESLHVKDYKY
Sbjct:  224 LKPNMVTPGSDSKKVTPEVIAEYTVRTLQRTVPAAVPAVLFLSGGQSEEEATRNLNAMNKLSTKKPWSLSFSFGRALQASTLKAWAGKVENLEKARAAFLARCKANSEATLGTYKGDA---AADTESLHVKDYKY 355          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALF_SPIOL (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.273e-53
Identity = 105/135 (77.78%), Postives = 117/135 (86.67%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPN+VTPGSE+ KVTP+VIAE+TVR LQRT+P AVP V+FLSGGQSEEEAT NLNAMN+L+TKKPW+LSFS+GRALQQSTLKAW GKEENV KAQ  FL R K NSEATLG Y+G A  G  A+ESLHVKDYKY
Sbjct:  224 LKPNIVTPGSESKKVTPEVIAEYTVRTLQRTVPQAVPGVMFLSGGQSEEEATLNLNAMNKLETKKPWTLSFSYGRALQQSTLKAWQGKEENVAKAQEVFLARAKGNSEATLGKYQGGAG-GADASESLHVKDYKY 357          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALF1_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.446e-51
Identity = 100/135 (74.07%), Postives = 115/135 (85.19%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVTPGS++PKV+P+VI E+TV AL+RT+PAAVP +VFLSGGQSEE+AT NLNAMN+    KPW+LSFSFGRALQQSTLK W+GK+ENV KAQ  FL RCKANSEATLG Y G +  G  A+ESLHVKDYKY
Sbjct:  224 LKPNMVTPGSDSPKVSPEVIGEYTVNALRRTVPAAVPGIVFLSGGQSEEQATLNLNAMNKFDVVKPWTLSFSFGRALQQSTLKTWSGKKENVGKAQDVFLARCKANSEATLGKYGGGSGTGL-ASESLHVKDYKY 357          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALF_ARATH (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Arabidopsis thaliana GN=At4g26520 PE=2 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 2.008e-44
Identity = 89/135 (65.93%), Postives = 106/135 (78.52%), Query Frame = -3
Query:  298 LKPNMVTPGSEAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVTPGS++PKV P++IAE+TV AL+RT+P A+P +VFLSG Q EE+AT NLNAMN+L   KPW+L+FSFG ALQQS +KAWAGK ENV KAQA FL RCKAN +ATLG Y G A     A E+L V  Y+Y
Sbjct:  224 LKPNMVTPGSDSPKVAPELIAEYTVTALRRTVPPAIPGIVFLSGIQREEQATLNLNAMNKLDVLKPWTLTFSFGGALQQSAIKAWAGKPENVAKAQAKFLTRCKANKDATLGKYTGWASGDSAAFENLVVIGYRY 358          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALF2_CAEEL (Fructose-bisphosphate aldolase 2 OS=Caenorhabditis elegans GN=aldo-2 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.884e-34
Identity = 78/136 (57.35%), Postives = 95/136 (69.85%), Query Frame = -3
Query:  298 LKPNMVTPG-SEAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVTPG S A K + + I   TV AL+R +PAAVP + FLSGGQSE +AT NLNA+N ++  KPW L+FS+GRALQ S LKAW GK+EN+  AQ   L R KAN +A+LG Y G+   G  AAESL V  + Y
Sbjct:  232 LKPNMVTPGQSSASKASHEAIGLATVTALRRGVPAAVPGITFLSGGQSELDATANLNAINSVQLGKPWKLTFSYGRALQASVLKAWGGKDENIAAAQKTLLHRSKANGDASLGKYAGEDAAG-AAAESLFVAKHSY 366          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALDOC_PANTR (Fructose-bisphosphate aldolase C OS=Pan troglodytes GN=ALDOC PE=2 SV=3)

HSP 1 Score: 143.665 bits (361), Expect = 9.351e-34
Identity = 72/136 (52.94%), Postives = 94/136 (69.12%), Query Frame = -3
Query:  298 LKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVTPG   P K TP+ IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N + A   F+ R + N  A  G Y+G  + G  AA+SL++ ++ Y
Sbjct:  229 LKPNMVTPGHACPIKYTPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASFNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAEAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CN188813 vs. ExPASy Swiss-Prot
Match: ALDOB_DANRE (Fructose-bisphosphate aldolase B OS=Danio rerio GN=aldob PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.351e-34
Identity = 76/136 (55.88%), Postives = 91/136 (66.91%), Query Frame = -3
Query:  298 LKPNMVTPG-SEAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAPFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 702
            LKPNMVT G S   K TP  +A  TV AL+RT+PAAVP + FLSGGQSEEEA+ NLNAMNQL   +PW LSFS+GRALQ S L AW G+  N + +Q  F+ R K NS A+ G YK   Q G+ + +SL    Y Y
Sbjct:  229 LKPNMVTAGHSCTKKYTPLEVAMATVTALRRTVPAAVPGICFLSGGQSEEEASLNLNAMNQLSLHRPWKLSFSYGRALQASALSAWKGQAANKKASQDAFVTRAKINSLASKGEYKPSGQAGQASTQSLFTASYTY 364          
The following BLAST results are available for this feature:
BLAST of CN188813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF_ORYSJ1.060e-6185.19Fructose-bisphosphate aldolase cytoplasmic isozyme... [more]
ALF_CICAR2.611e-6083.70Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF2_PEA7.110e-5882.22Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_MAIZE6.019e-5782.22Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_SPIOL5.273e-5377.78Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF1_PEA6.446e-5174.07Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_ARATH2.008e-4465.93Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF2_CAEEL1.884e-3457.35Fructose-bisphosphate aldolase 2 OS=Caenorhabditis... [more]
ALDOC_PANTR9.351e-3452.94Fructose-bisphosphate aldolase C OS=Pan troglodyte... [more]
ALDOB_DANRE9.351e-3455.88Fructose-bisphosphate aldolase B OS=Danio rerio GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006M23_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006M23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188813 ID=CN188813; Name=CN188813; organism=Citrus sinensis; type=EST; length=704bp
TTTTTTTTTTTTTTTTTAGCACAAGAAAACATTATCAACTTTTTGACAAA
ATCACAGAAATTTAGTGCCATTAGGGGAACGGAAAAAAAAAGAAAAACAA
AAACAAAAGCATAAACAGTTTTCAGTTTAGTTTTGATCAAAACCACTCAA
ACCGAAGTTCCCAAGCTTTTTATTGCTCCACCTAAATATGAAAGGGCTCT
AAAACTATGAATGAGAATGGGCCAACCTAATGTTCATACCGCCATTTACT
CTCATAAAGTTCATAAAGCACAACACCCAAAGCTTCAACTGTGCTTAGTA
TTTGTAGTCCTTGACATGGAGAGACTCTGCGGCACCTTCACCAAGCTGGG
CATCACCCTTGTAAGTACCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTG
ACAAGGAAGGGGGCCTGGGCCTTCTGCACATTCTCTTCCTTTCCAGCCCA
TGCCTTGAGAGTGCTCTGCTGAAGTGCACGTCCAAAGGAGAAGGAAAGTG
ACCATGGCTTCTTCGTCTTGAGCTGGTTCATGGCATTAAGGTTGCGGGTA
GCCTCCTCCTCACTCTGCCCACCAGACAAGAACACAACAGCAGGAACTGC
TGCAGGCATAGTGCGTTGCAGGGCCCGGACAGTGTGTTCAGCAATCACGT
CCGGTGTAACTTTGGGAGCTTCAGATCCAGGGGTCACCATGTTGGGCTTC
AAAA
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