CN181956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181956 vs. ExPASy Swiss-Prot
Match: RL8_SOLLC (60S ribosomal protein L8 OS=Solanum lycopersicum GN=RPL8 PE=2 SV=1) HSP 1 Score: 337.035 bits (863), Expect = 3.191e-92 Identity = 159/168 (94.64%), Postives = 166/168 (98.81%), Query Frame = 1 Query: 49 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQ 552 MGRVIRAQRKGAGSVFKSHTHHRKGPARFR+LDFGERNGYLKGVITE+IHDPGRGAPLARVTFRHPFRY+HQKELFVAAEGMYTGQFVYCG+KATL+VGNVLPLRSIPEGAVVCNVEH VGDRGVFARCSGDYA+VISHNPDN TTR+KLPSGAKKIVPSGCRAMIGQ Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRTLDFGERNGYLKGVITEVIHDPGRGAPLARVTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKVGDRGVFARCSGDYAIVISHNPDNGTTRVKLPSGAKKIVPSGCRAMIGQ 168 HSP 2 Score: 23.0978 bits (48), Expect = 3.191e-92 Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 2 Query: 569 RTEKPLLKAG 598 RTEKP+LKAG Sbjct: 174 RTEKPMLKAG 183
BLAST of CN181956 vs. ExPASy Swiss-Prot
Match: RL83_ARATH (60S ribosomal protein L8-3 OS=Arabidopsis thaliana GN=RPL8C PE=2 SV=2) HSP 1 Score: 328.946 bits (842), Expect = 8.480e-90 Identity = 154/168 (91.67%), Postives = 165/168 (98.21%), Query Frame = 1 Query: 49 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQ 552 MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGV+TEIIHDPGRGAPLARV FRHPFR++ QKELFVAAEGMYTGQF+YCG+KATLVVGNVLPLRSIPEGAV+CNVEHHVGDRGVFAR SGDYA+VI+HNPDNDT+RIKLPSG+KKIVPSGCRAMIGQ Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHVGDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQ 168 HSP 2 Score: 23.0978 bits (48), Expect = 8.480e-90 Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 2 Query: 569 RTEKPLLKAG 598 RTEKP+LKAG Sbjct: 174 RTEKPMLKAG 183
BLAST of CN181956 vs. ExPASy Swiss-Prot
Match: RL8_TOBAC (60S ribosomal protein L8 OS=Nicotiana tabacum GN=RPL8 PE=2 SV=1) HSP 1 Score: 328.561 bits (841), Expect = 1.106e-89 Identity = 156/168 (92.86%), Postives = 163/168 (97.02%), Query Frame = 1 Query: 49 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQ 552 MGR+IRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITE+IHDPGRGAPLARVTFR+PFRY HQKELFVAAEGMYTGQFVYCG+KATL+VGNVLPLRSIPEGAVVCNVEH VGDRGVFARCSG YA+VISHNPDN TTRIKLPSG+KKIVPSGCR MIGQ Sbjct: 1 MGRLIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEVIHDPGRGAPLARVTFRYPFRYNHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKVGDRGVFARCSGAYAIVISHNPDNGTTRIKLPSGSKKIVPSGCRRMIGQ 168 HSP 2 Score: 23.0978 bits (48), Expect = 1.106e-89 Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 2 Query: 569 RTEKPLLKAG 598 RTEKP+LKAG Sbjct: 174 RTEKPMLKAG 183
BLAST of CN181956 vs. ExPASy Swiss-Prot
Match: RL81_ARATH (60S ribosomal protein L8-1 OS=Arabidopsis thaliana GN=RPL8A PE=2 SV=2) HSP 1 Score: 328.561 bits (841), Expect = 1.106e-89 Identity = 155/168 (92.26%), Postives = 165/168 (98.21%), Query Frame = 1 Query: 49 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQ 552 MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGV+TEIIHDPGRGAPLARVTFRHPFR++ QKELFVAAEGMYTGQF+YCG+KATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGV AR SGDYA+VI+HNPD+DTTRIKLPSG+KKIVPSGCRAMIGQ Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAMIGQ 168 HSP 2 Score: 23.0978 bits (48), Expect = 1.106e-89 Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 2 Query: 569 RTEKPLLKAG 598 RTEKP+LKAG Sbjct: 174 RTEKPMLKAG 183
BLAST of CN181956 vs. ExPASy Swiss-Prot
Match: RL82_ARATH (60S ribosomal protein L8-2 OS=Arabidopsis thaliana GN=RPL8B PE=2 SV=2) HSP 1 Score: 300.442 bits (768), Expect = 4.433e-81 Identity = 141/169 (83.43%), Postives = 158/169 (93.49%), Query Frame = 1 Query: 49 MGRVIRAQRKGA-GSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIGQ 552 MGRVIRAQRKGA GSVFKSHTHHRKGPA+FRSLD+GERNGYLKG++TEIIHDPGRGAPLARV FRHPFRY QKELFVAAEGMYTGQ++YCG+KA L+VGNVLPL SIPEGAV+CNVE HVGDRG AR SGDYA+VI+HNP+++TTR+KLPSG+KKI+PS CRAMIGQ Sbjct: 1 MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLARVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELHVGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQ 169
BLAST of CN181956 vs. ExPASy Swiss-Prot
Match: RL8_DROME (60S ribosomal protein L8 OS=Drosophila melanogaster GN=RpL8 PE=2 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 5.817e-65 Identity = 115/167 (68.86%), Postives = 138/167 (82.63%), Query Frame = 1 Query: 49 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIG 549 MGRVIRAQRKGAGSVFK+H RKG A+ RSLDF ER+GY++GV+ +IIHDPGRGAPLA V FR P+RY+ +KELF+A EGM+TGQFVYCGRKATL +GNV+PL +PEG ++CN+E GDRG AR SG+YA VI+HN D TR+KLPSGAKK+VPS RAM+G Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVG 167
BLAST of CN181956 vs. ExPASy Swiss-Prot
Match: RL8_ANOGA (60S ribosomal protein L8 OS=Anopheles gambiae GN=RpL8 PE=2 SV=2) HSP 1 Score: 243.817 bits (621), Expect = 4.925e-64 Identity = 114/167 (68.26%), Postives = 137/167 (82.04%), Query Frame = 1 Query: 49 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIG 549 MGRVIRAQRKGAGSVF++HT RKG + R LD+ ER+GYLKGV+ +IIHDPGRGAPLA V FR P+R++ K+LF+AAEGMYTGQFVYCGR+A L +GNVLP+ +PEG +VCN+E GDRG AR SG+YA VI+HNPD TR+KLPSGAKK++PS RAMIG Sbjct: 1 MGRVIRAQRKGAGSVFRAHTKKRKGEPKLRHLDYAERHGYLKGVVKQIIHDPGRGAPLAVVNFRDPYRFRLSKQLFIAAEGMYTGQFVYCGRRAQLQIGNVLPIGLMPEGTIVCNLEEKTGDRGKLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMIG 167
BLAST of CN181956 vs. ExPASy Swiss-Prot
Match: RL8_SPOFR (60S ribosomal protein L8 OS=Spodoptera frugiperda GN=RpL8 PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 4.169e-63 Identity = 111/167 (66.47%), Postives = 138/167 (82.63%), Query Frame = 1 Query: 49 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIG 549 MGRVIRAQRKGAGSVF SHT RKG + RSLD+ ER+GY+KGV+ +IIHDPGRGAPLA V FR P++++ +KELF+A EG+YTGQFVYCG+KATL VGNV+P+ ++PEG +VCN+E +GDRG AR SG++A VI HNPD TR+KLPSGAKK++PS R M+G Sbjct: 1 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVG 167
BLAST of CN181956 vs. ExPASy Swiss-Prot
Match: RL8_MAMBR (60S ribosomal protein L8 OS=Mamestra brassicae GN=RpL8 PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 4.169e-63 Identity = 111/167 (66.47%), Postives = 138/167 (82.63%), Query Frame = 1 Query: 49 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIG 549 MGRVIRAQRKGAGSVF SHT RKG + RSLD+ ER+GY+KGV+ +IIHDPGRGAPLA V FR P++++ +KELF+A EG+YTGQFVYCG+KATL VGNV+P+ ++PEG +VCN+E +GDRG AR SG++A VI HNPD TR+KLPSGAKK++PS R M+G Sbjct: 1 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVG 167
BLAST of CN181956 vs. ExPASy Swiss-Prot
Match: RL8_XENLA (60S ribosomal protein L8 OS=Xenopus laevis GN=rpl8 PE=2 SV=3) HSP 1 Score: 240.35 bits (612), Expect = 5.445e-63 Identity = 109/167 (65.27%), Postives = 138/167 (82.63%), Query Frame = 1 Query: 49 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIIHDPGRGAPLARVTFRHPFRYQHQKELFVAAEGMYTGQFVYCGRKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAVVISHNPDNDTTRIKLPSGAKKIVPSGCRAMIG 549 MGRVIR QRKGAGSVFK+H HRKG A+ R++DF ERNGY+KG++ +IIHDPGRGAPLA+V FR P+R++ + ELFVAAEG++TGQFVYCG+KA L +GNVLP+ ++PEG +VC VE GDRG AR SG+YA VISHNP+ TR+KLPSG+KK++ S RA++G Sbjct: 1 MGRVIRGQRKGAGSVFKAHVKHRKGAAKLRAIDFAERNGYIKGIVKDIIHDPGRGAPLAKVAFRDPYRFKKRTELFVAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCVEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAIVG 167 The following BLAST results are available for this feature:
BLAST of CN181956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181956 ID=CN181956; Name=CN181956; organism=Citrus sinensis; type=EST; length=600bpback to top |