CN181955

Overview
NameCN181955
Unique NameCN181955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length625
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:158..780. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK1_CATRO (S-adenosylmethionine synthetase 1 OS=Catharanthus roseus GN=SAMS1 PE=1 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 4.586e-91
Identity = 152/158 (96.20%), Postives = 155/158 (98.10%), Query Frame = 2
Query:   92 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 565
            METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCRSIGFVSDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET EFMPLSHVLATKLGARLTEVRKN
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRSIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKN 158          

HSP 2 Score: 42.743 bits (99), Expect = 4.586e-91
Identity = 17/18 (94.44%), Postives = 17/18 (94.44%), Query Frame = 3
Query:  570 TCSWLRPDGKTQVTVEYY 623
            TC WLRPDGKTQVTVEYY
Sbjct:  160 TCPWLRPDGKTQVTVEYY 177          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_CARPA (S-adenosylmethionine synthetase OS=Carica papaya GN=SAMS PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 7.800e-91
Identity = 152/158 (96.20%), Postives = 154/158 (97.47%), Query Frame = 2
Query:   92 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 565
            METFLFTSESVNEGHPDKLCDQISDAVLDACL QDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCRSIGFVSDDVGLDAD CKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDET EFMPLSHVLATKLGARLTEVRKN
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEKIVRDTCRSIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKN 158          

HSP 2 Score: 42.743 bits (99), Expect = 7.800e-91
Identity = 17/18 (94.44%), Postives = 17/18 (94.44%), Query Frame = 3
Query:  570 TCSWLRPDGKTQVTVEYY 623
            TC WLRPDGKTQVTVEYY
Sbjct:  160 TCPWLRPDGKTQVTVEYY 177          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK1_POPTR (S-adenosylmethionine synthetase 1 OS=Populus trichocarpa GN=METK1 PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 7.804e-91
Identity = 149/158 (94.30%), Postives = 155/158 (98.10%), Query Frame = 2
Query:   92 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 565
            METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDP+SKVACETCTKTNMVMVFGEITTK K+DYEKIVRDTCR+IGF+SDDVGLDAD CKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDET E+MPLSHVLATKLGARLTEVRKN
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKGKIDYEKIVRDTCRNIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPEYMPLSHVLATKLGARLTEVRKN 158          

HSP 2 Score: 42.743 bits (99), Expect = 7.804e-91
Identity = 17/18 (94.44%), Postives = 17/18 (94.44%), Query Frame = 3
Query:  570 TCSWLRPDGKTQVTVEYY 623
            TC WLRPDGKTQVTVEYY
Sbjct:  160 TCPWLRPDGKTQVTVEYY 177          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK2_PEA (S-adenosylmethionine synthetase 2 OS=Pisum sativum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 2.261e-90
Identity = 151/157 (96.18%), Postives = 153/157 (97.45%), Query Frame = 2
Query:   95 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 565
            ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR+IGFVSDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPEDIGAGDQGHMFGYATDET EFMPLSHVLATKLGA LTEVRKN
Sbjct:    4 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGASLTEVRKN 160          

HSP 2 Score: 42.743 bits (99), Expect = 2.261e-90
Identity = 17/18 (94.44%), Postives = 17/18 (94.44%), Query Frame = 3
Query:  570 TCSWLRPDGKTQVTVEYY 623
            TC WLRPDGKTQVTVEYY
Sbjct:  162 TCPWLRPDGKTQVTVEYY 179          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK1_ELAUM (S-adenosylmethionine synthetase 1 OS=Elaeagnus umbellata GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 5.017e-90
Identity = 149/158 (94.30%), Postives = 155/158 (98.10%), Query Frame = 2
Query:   92 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 565
            METFLFTSESVNEGHPDKLCDQISDAVLDACL QDP+SKVACETC+KTNMVMVFGEITTKA VDYEKIVRDTCR+IGFVSDDVGLDAD+CKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDET E+MPLSHVLATKLGARLTEVRKN
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCSKTNMVMVFGEITTKANVDYEKIVRDTCRAIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPEYMPLSHVLATKLGARLTEVRKN 158          

HSP 2 Score: 42.743 bits (99), Expect = 5.017e-90
Identity = 17/18 (94.44%), Postives = 17/18 (94.44%), Query Frame = 3
Query:  570 TCSWLRPDGKTQVTVEYY 623
            TC WLRPDGKTQVTVEYY
Sbjct:  160 TCPWLRPDGKTQVTVEYY 177          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK2_CATRO (S-adenosylmethionine synthetase 2 OS=Catharanthus roseus GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 6.545e-90
Identity = 150/158 (94.94%), Postives = 154/158 (97.47%), Query Frame = 2
Query:   92 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 565
            METFLFTSESVNEGHPDKLCDQISDAVLDACL QDPESKVACETCTKTNMVMVFGEITTKA+VDYEKIVRDTCR+IGFVSDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNMVMVFGEITTKAQVDYEKIVRDTCRAIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKN 158          

HSP 2 Score: 42.743 bits (99), Expect = 6.545e-90
Identity = 17/18 (94.44%), Postives = 17/18 (94.44%), Query Frame = 3
Query:  570 TCSWLRPDGKTQVTVEYY 623
            TC WLRPDGKTQVTVEYY
Sbjct:  160 TCPWLRPDGKTQVTVEYY 177          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK4_HORVU (S-adenosylmethionine synthetase 4 OS=Hordeum vulgare GN=SAM4 PE=2 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 8.537e-90
Identity = 149/160 (93.12%), Postives = 156/160 (97.50%), Query Frame = 2
Query:   89 KMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNS 568
            ++ETFLFTSESVNEGHPDKLCDQISDAVLDACL +DP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR IGFVS+DVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDET EFMPLSHVLATKLGARLTEVRKN+
Sbjct:    3 EVETFLFTSESVNEGHPDKLCDQISDAVLDACLAEDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRGIGFVSNDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNA 162          

HSP 2 Score: 40.817 bits (94), Expect = 8.537e-90
Identity = 16/18 (88.89%), Postives = 17/18 (94.44%), Query Frame = 3
Query:  570 TCSWLRPDGKTQVTVEYY 623
            TC WLRPDGKTQVTVEY+
Sbjct:  163 TCPWLRPDGKTQVTVEYH 180          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK1_ARATH (S-adenosylmethionine synthetase 1 OS=Arabidopsis thaliana GN=SAM1 PE=1 SV=2)

HSP 1 Score: 308.531 bits (789), Expect = 8.537e-90
Identity = 150/158 (94.94%), Postives = 153/158 (96.84%), Query Frame = 2
Query:   92 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 565
            METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR+IGFVSDDVGLDAD CKVLVNIEQQSPDIAQGVHGHFTK PE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRAIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKCPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKN 158          

HSP 2 Score: 43.5134 bits (101), Expect = 8.537e-90
Identity = 17/18 (94.44%), Postives = 18/18 (100.00%), Query Frame = 3
Query:  570 TCSWLRPDGKTQVTVEYY 623
            TC+WLRPDGKTQVTVEYY
Sbjct:  160 TCAWLRPDGKTQVTVEYY 177          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_CAMSI (S-adenosylmethionine synthetase OS=Camellia sinensis GN=SAM PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.114e-89
Identity = 150/158 (94.94%), Postives = 154/158 (97.47%), Query Frame = 2
Query:   92 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 565
            METFLFTSESVNEGHPDKLCDQISDAVLDACLEQD +SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR+IGFVSDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDETSE MPLSHVLATKLGARLTEVRKN
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDQDSKVACETCTKTNMVMVFGEITTKAAVDYEKIVRDTCRTIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETSELMPLSHVLATKLGARLTEVRKN 158          

HSP 2 Score: 42.743 bits (99), Expect = 1.114e-89
Identity = 17/18 (94.44%), Postives = 17/18 (94.44%), Query Frame = 3
Query:  570 TCSWLRPDGKTQVTVEYY 623
            TC WLRPDGKTQVTVEYY
Sbjct:  160 TCPWLRPDGKTQVTVEYY 177          
BLAST of CN181955 vs. ExPASy Swiss-Prot
Match: METK_PHALU (S-adenosylmethionine synthetase OS=Phaseolus lunatus GN=SAMS PE=2 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.895e-89
Identity = 147/157 (93.63%), Postives = 153/157 (97.45%), Query Frame = 2
Query:   95 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKN 565
            ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTN+VMVFGEITTKA VDYEKIVRDTCR+IGF+S+DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDET E MPLSHVLATKLGARLTEVRKN
Sbjct:    3 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRDTCRNIGFISNDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKN 159          

HSP 2 Score: 44.669 bits (104), Expect = 1.895e-89
Identity = 18/18 (100.00%), Postives = 18/18 (100.00%), Query Frame = 3
Query:  570 TCSWLRPDGKTQVTVEYY 623
            TCSWLRPDGKTQVTVEYY
Sbjct:  161 TCSWLRPDGKTQVTVEYY 178          
The following BLAST results are available for this feature:
BLAST of CN181955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_CATRO4.586e-9196.20S-adenosylmethionine synthetase 1 OS=Catharanthus ... [more]
METK_CARPA7.800e-9196.20S-adenosylmethionine synthetase OS=Carica papaya G... [more]
METK1_POPTR7.804e-9194.30S-adenosylmethionine synthetase 1 OS=Populus trich... [more]
METK2_PEA2.261e-9096.18S-adenosylmethionine synthetase 2 OS=Pisum sativum... [more]
METK1_ELAUM5.017e-9094.30S-adenosylmethionine synthetase 1 OS=Elaeagnus umb... [more]
METK2_CATRO6.545e-9094.94S-adenosylmethionine synthetase 2 OS=Catharanthus ... [more]
METK4_HORVU8.537e-9093.13S-adenosylmethionine synthetase 4 OS=Hordeum vulga... [more]
METK1_ARATH8.537e-9094.94S-adenosylmethionine synthetase 1 OS=Arabidopsis t... [more]
METK_CAMSI1.114e-8994.94S-adenosylmethionine synthetase OS=Camellia sinens... [more]
METK_PHALU1.895e-8993.63S-adenosylmethionine synthetase OS=Phaseolus lunat... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001L15_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001L15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181955 ID=CN181955; Name=CN181955; organism=Citrus sinensis; type=EST; length=625bp
GAGGATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTAAGTCTGAATCT
TAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGATGGAGACC
TTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGACAAGTTGTG
CGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGAGCAGGATCCTG
AGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGGTCATGGTC
TTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCG
CGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTTGACG
CCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCGGATATT
GCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTGGTGC
TGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCTCTGAAT
TTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACG
GAGGTTAGGAAGAATAGTAACCTGCTCTTGGCTAAGGCCCGATGGGAAGA
CCCAGGTCACTGTTGAGTACTACAA
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