CN188801
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_HEVBR (Superoxide dismutase [Mn], mitochondrial OS=Hevea brasiliensis GN=SODA PE=2 SV=1) HSP 1 Score: 372.859 bits (956), Expect = 1.103e-102 Identity = 178/224 (79.46%), Postives = 192/224 (85.71%), Query Frame = 3 Query: 42 PFGIRKAIGLGKSVRLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKECP 713 P + A GLG+ LRGLQT +LPDLPYDY ALEPAISGEIMQLHHQ+ HQ Y+TNYNKA+EQL A+ K D++ VV+LQ AIKFNGGGHVNHSIFWKNLAPV EGGGE PH SLGWAIDA FGSLE LIQ M+AEGAALQGSGWVWL LD E K+LVVETTANQDPLVTK PTLVPLLGIDVWEHAYYLQYKNV+PDYLKNIW VMNWKYAS+VY KECP Sbjct: 13 PSAFKAATGLGQ-----LRGLQTFSLPDLPYDYGALEPAISGEIMQLHHQKHHQTYITNYNKALEQLNDAIEKGDSAAVVKLQSAIKFNGGGHVNHSIFWKNLAPVREGGGELPHGSLGWAIDADFGSLEKLIQLMNAEGAALQGSGWVWLALDKELKKLVVETTANQDPLVTKGPTLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVMNWKYASEVYAKECP 231
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_NICPL (Superoxide dismutase [Mn], mitochondrial OS=Nicotiana plumbaginifolia GN=SODA PE=1 SV=1) HSP 1 Score: 371.318 bits (952), Expect = 3.209e-102 Identity = 173/228 (75.88%), Postives = 192/228 (84.21%), Query Frame = 3 Query: 30 MALPPFGIRKAIGLGKSVRLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKECP 713 MAL R+ + G R LRGLQT +LPDLPYDY ALEPAISG+IMQLHHQ HQ YVTNYNKA+EQL A++K D TV +L AIKFNGGGH+NHSIFWKNLAPV EGGGEPP SLGWAID +FGSLEAL+QKM+AEGAALQGSGWVWLG+D E KRLV+ETTANQDPLV+K LVPLLGIDVWEHAYYLQYKNV+PDYLKNIW VMNWKYA++VY+KECP Sbjct: 1 MALRTLVSRRTLATGLGFRQQLRGLQTFSLPDLPYDYGALEPAISGDIMQLHHQNHHQTYVTNYNKALEQLHDAISKGDAPTVAKLHSAIKFNGGGHINHSIFWKNLAPVREGGGEPPKGSLGWAIDTNFGSLEALVQKMNAEGAALQGSGWVWLGVDKELKRLVIETTANQDPLVSKGANLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVMNWKYANEVYEKECP 228
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_PRUPE (Superoxide dismutase [Mn], mitochondrial OS=Prunus persica GN=SOD PE=2 SV=1) HSP 1 Score: 369.777 bits (948), Expect = 9.336e-102 Identity = 174/228 (76.32%), Postives = 192/228 (84.21%), Query Frame = 3 Query: 30 MALPPFGIRKAIGLGKSVRLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKECP 713 MAL R+ + G R LRGLQT +LPDLPY+Y ALEPAISG+IMQLHHQ HQ YVTNYNKA+EQL A++K D TV +L AIKFNGGGH+NHSIFWKNLAPV EGGGEPP SLGWAID +FGSLEAL+QKM+AEGAALQGSGWVWL LD E K+LVVETTANQDPLVTK PTLVPLLGIDVWEHAYYLQYKNV+PDYLKNIW V+NWKYAS+VY+KE P Sbjct: 1 MALRTLVSRRTLATGLGFRQQLRGLQTFSLPDLPYNYGALEPAISGDIMQLHHQNHHQTYVTNYNKALEQLHDAISKGDAPTVAKLHSAIKFNGGGHINHSIFWKNLAPVREGGGEPPKGSLGWAIDTNFGSLEALVQKMNAEGAALQGSGWVWLALDKELKKLVVETTANQDPLVTKGPTLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKYASEVYEKESP 228
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_ARATH (Superoxide dismutase [Mn], mitochondrial OS=Arabidopsis thaliana GN=SODA PE=1 SV=2) HSP 1 Score: 358.992 bits (920), Expect = 1.648e-98 Identity = 167/207 (80.68%), Postives = 187/207 (90.34%), Query Frame = 3 Query: 87 LGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKE 707 L +RG+QT TLPDLPYDY ALEPAISGEIMQ+HHQ+ HQAYVTNYN A+EQL QA+NK D STVV+LQ AIKFNGGGHVNHSIFWKNLAP EGGGEPP SLG AIDAHFGSLE L++KMSAEGAA+QGSGWVWLGLD E K+LVV+TTANQDPLVTK +LVPL+GIDVWEHAYYLQYKNV+P+YLKN+W V+NWKYAS+VY+KE Sbjct: 23 LRIRGIQTFTLPDLPYDYGALEPAISGEIMQIHHQKHHQAYVTNYNNALEQLDQAVNKGDASTVVKLQSAIKFNGGGHVNHSIFWKNLAPSSEGGGEPPKGSLGSAIDAHFGSLEGLVKKMSAEGAAVQGSGWVWLGLDKELKKLVVDTTANQDPLVTKGGSLVPLVGIDVWEHAYYLQYKNVRPEYLKNVWKVINWKYASEVYEKE 229
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_CAPAN (Superoxide dismutase [Mn], mitochondrial OS=Capsicum annuum GN=SODA PE=2 SV=1) HSP 1 Score: 357.836 bits (917), Expect = 3.671e-98 Identity = 169/228 (74.12%), Postives = 190/228 (83.33%), Query Frame = 3 Query: 30 MALPPFGIRKAIGLGKSVRLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKECP 713 MAL +K + R LR +QT +LPDL YDY ALEPAISGEIMQLHHQ+ HQ Y+TNYN A++QL A+NK D+ TV +LQGAIKFNGGGH+NHS+FWKNLAP EGGGEPP SLG AID +FGSLEA+IQKM+AEGAALQGSGWVWLGLD E KRLV+ETTANQDPLV K P LVPLLGIDVWEHAYYLQYKNVKPDYLKNIW V+NWKYA++VY+KECP Sbjct: 1 MALRNLMTKKPFAGILTFRQQLRCVQTFSLPDLSYDYGALEPAISGEIMQLHHQKHHQTYITNYNNALQQLHDAINKGDSPTVAKLQGAIKFNGGGHINHSVFWKNLAPTREGGGEPPKGSLGSAIDTNFGSLEAVIQKMNAEGAALQGSGWVWLGLDKELKRLVIETTANQDPLVIKGPNLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWKVINWKYAAEVYEKECP 228
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM1_MAIZE (Superoxide dismutase [Mn] 3.1, mitochondrial OS=Zea mays GN=SODA.4 PE=2 SV=1) HSP 1 Score: 337.806 bits (865), Expect = 3.932e-92 Identity = 160/220 (72.73%), Postives = 178/220 (80.91%), Query Frame = 3 Query: 42 PFGIRKAIGLGKSVRLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 701 PFG G + RG+ TVTLPDL YD+ ALEPAISGEIM+LHHQ+ H YV NYNKA+EQL A++K D S VVQLQ AIKFNGGGHVNHSIFWKNL P+ EGGGEPPH LGWAID FGS EAL++KM+AEGAALQGSGWVWL LD E K++ VETTANQDPLVTK +LVPLLGIDVWEHAYYLQYKNV+PDYL NIW VMNWKYA +VY+ Sbjct: 15 PFG---GAGRPLAAAASARGVTTVTLPDLSYDFGALEPAISGEIMRLHHQKHHATYVANYNKALEQLETAVSKGDASAVVQLQAAIKFNGGGHVNHSIFWKNLKPISEGGGEPPHGKLGWAIDEDFGSFEALVKKMNAEGAALQGSGWVWLALDKEAKKVSVETTANQDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVYE 231
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_ORYSJ (Superoxide dismutase [Mn], mitochondrial OS=Oryza sativa subsp. japonica GN=SODA PE=2 SV=2) HSP 1 Score: 335.495 bits (859), Expect = 1.951e-91 Identity = 161/227 (70.93%), Postives = 177/227 (77.97%), Query Frame = 3 Query: 30 MALPPFGIRK---AIGLGKSVRLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 701 MAL RK A L + RG+ TV LPDLPYDY ALEPAISGEIM+LHHQ+ H YV NYNKA+EQL A+ K D +V LQ AIKFNGGGHVNHSIFW NL P+ EGGG+PPH+ LGWAID FGS EAL++KMSAEGAALQGSGWVWL LD E K+L VETTANQDPLVTK LVPLLGIDVWEHAYYLQYKNV+PDYL NIW VMNWKYA +VY+ Sbjct: 1 MALRTLASRKTLAAAALPLAAAAAARGVTTVALPDLPYDYGALEPAISGEIMRLHHQKHHATYVANYNKALEQLDAAVAKGDAPAIVHLQSAIKFNGGGHVNHSIFWNNLKPISEGGGDPPHAKLGWAIDEDFGSFEALVKKMSAEGAALQGSGWVWLALDKEAKKLSVETTANQDPLVTKGANLVPLLGIDVWEHAYYLQYKNVRPDYLSNIWKVMNWKYAGEVYE 227
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM4_MAIZE (Superoxide dismutase [Mn] 3.4, mitochondrial OS=Zea mays GN=SODA.3 PE=2 SV=1) HSP 1 Score: 335.109 bits (858), Expect = 2.548e-91 Identity = 157/212 (74.06%), Postives = 174/212 (82.08%), Query Frame = 3 Query: 66 GLGKSVRLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 701 G + RG+ TV LPDL YD+ ALEPAISGEIM+LHHQ+ H YV NYNKA+EQL A+ K D S VVQLQGAIKFNGGGHVNHSIFWKNL P+ EGGGEPPH LGWAID FGS EAL+++M+AEGAALQGSGWVWL LD E K+L VETTANQDPLVTK +LVPLLGIDVWEHAYYLQYKNV+PDYL NIW VMNWKYA +VY+ Sbjct: 18 GAARPSAASARGVTTVALPDLSYDFGALEPAISGEIMRLHHQKHHATYVGNYNKALEQLDAAVAKGDASAVVQLQGAIKFNGGGHVNHSIFWKNLKPISEGGGEPPHGKLGWAIDEDFGSFEALVKRMNAEGAALQGSGWVWLALDKEPKKLSVETTANQDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVYE 229
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM3_MAIZE (Superoxide dismutase [Mn] 3.3, mitochondrial OS=Zea mays GN=SODA.2 PE=2 SV=1) HSP 1 Score: 330.872 bits (847), Expect = 4.806e-90 Identity = 152/202 (75.25%), Postives = 170/202 (84.16%), Query Frame = 3 Query: 96 RGLQTVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 701 RG+ TV LPDL YD+ ALEP ISGEIM+LHHQ+ H YV NYNKA+EQ+ + K D S VVQLQGAIKFNGGGHVNHSIFWKNL P+ EGGGEPPH LGWAID FGS EAL+++M+AEGAALQGSGWVWL LD E K++ VETTANQDPLVTK +LVPLLGIDVWEHAYYLQYKNV+PDYL NIW VMNWKYA +VY+ Sbjct: 28 RGVTTVALPDLSYDFGALEPVISGEIMRLHHQKNHATYVVNYNKALEQIDDVVVKGDDSAVVQLQGAIKFNGGGHVNHSIFWKNLKPISEGGGEPPHGKLGWAIDEDFGSFEALVKRMNAEGAALQGSGWVWLALDKEAKKVSVETTANQDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVYE 229
BLAST of CN188801 vs. ExPASy Swiss-Prot
Match: SODM_PEA (Superoxide dismutase [Mn], mitochondrial OS=Pisum sativum GN=SODA PE=2 SV=2) HSP 1 Score: 327.791 bits (839), Expect = 4.069e-89 Identity = 157/204 (76.96%), Postives = 174/204 (85.29%), Query Frame = 3 Query: 96 RGLQTVTLPDLPYDYSALEPAISGEIMQLHHQRRHQAYVTNYNKAVEQLFQALNKVDTSTVVQLQGAIKFNGGGHVNHSIFWKNLAPVHEGGGEPPHSSLGWAIDAHFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKE 707 RGL TLPDL YDY ALEP ISGEIMQ+HHQ+ HQ Y+TNYNKA+EQL A+ K DTST V+LQ AIKFNGGGH+NHSIFWKNLAPV EGGGEPP SLGWAID +FGSLEALIQK++AEGAALQ WLGLD + KRLVVETT QDPLVTK +LVPLLGIDVWEHAYYLQYKNV+PDYLKNIW V+NWK+AS+VY+KE Sbjct: 35 RGLHVFTLPDLAYDYGALEPVISGEIMQIHHQKHHQTYITNYNKALEQLHDAVAKADTSTTVKLQNAIKFNGGGHINHSIFWKNLAPVSEGGGEPPKESLGWAIDTNFGSLEALIQKINAEGAALQ-----WLGLDKDLKRLVVETT--QDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKHASEVYEKE 231 The following BLAST results are available for this feature:
BLAST of CN188801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188801 ID=CN188801; Name=CN188801; organism=Citrus sinensis; type=EST; length=773bpback to top |