CN181929

Overview
NameCN181929
Unique NameCN181929
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length648
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN181929_ssr217 microsatellite CN181929_ssr217:217..228. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1541 contig Csv1_Contig1541:31..678. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181929 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 7.865e-90
Identity = 162/191 (84.82%), Postives = 172/191 (90.05%), Query Frame = 3
Query:   75 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNG 647
            I VSKLRGKR              NWLQVGDDLNHRNL+DLAKK+GD+ LLRMGQRNLVVVSSPD +KEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ R+ WE+EAA+VVEDVKK+PEAATNGIVLRRRLQLMMYNNMYRIMFDRRFES+DDPLFN+LKALNG
Sbjct:   21 ILVSKLRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPDLSKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKKNPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESEDDPLFNKLKALNG 211          
BLAST of CN181929 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 4.315e-88
Identity = 161/191 (84.29%), Postives = 169/191 (88.48%), Query Frame = 3
Query:   75 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNG 647
            I VSKLRGKR              NWLQVGDDLN R L++L+KK+GDV LLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVY EHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDP+AAT GIVLRRRLQL+MYNNMYRIMFDRRFES DDPLFN+LKALNG
Sbjct:   21 IAVSKLRGKRFKLPPGPLGFPVFGNWLQVGDDLNQRKLANLSKKFGDVYLLRMGQRNLVVVSSPEMAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYSEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPQAATTGIVLRRRLQLLMYNNMYRIMFDRRFESVDDPLFNKLKALNG 211          
BLAST of CN181929 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 323.553 bits (828), Expect = 5.636e-88
Identity = 159/191 (83.25%), Postives = 172/191 (90.05%), Query Frame = 3
Query:   75 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNG 647
            I VSKLRGKR              NWLQVGDDLNHRNL+DLAKK+GD+LLLRMGQRNLVVVSSP+ +KEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ R+ WE+EAA+VVEDVKK+P AAT+GIVLRRRLQLMMYNNMYRIMFDRRFES++DPLFN+LKALNG
Sbjct:   21 ILVSKLRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDILLLRMGQRNLVVVSSPELSKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKKNPGAATHGIVLRRRLQLMMYNNMYRIMFDRRFESEEDPLFNKLKALNG 211          
BLAST of CN181929 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 2.142e-87
Identity = 158/189 (83.60%), Postives = 169/189 (89.42%), Query Frame = 3
Query:   81 VSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNG 647
            VSKLRGK+              NWLQVGDDLNHRNLSD AKK+G++ LLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ R+ WE+EAARVVEDVKK+PE+ATNGIVLRRRLQLMMYNNMYRIMFDRRFES+DDPLF +LKALNG
Sbjct:   23 VSKLRGKKFKLPPGPIPVPVFGNWLQVGDDLNHRNLSDYAKKFGEIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAARVVEDVKKNPESATNGIVLRRRLQLMMYNNMYRIMFDRRFESEDDPLFVKLKALNG 211          
BLAST of CN181929 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 9.949e-85
Identity = 155/191 (81.15%), Postives = 165/191 (86.39%), Query Frame = 3
Query:   75 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNG 647
            IT+SKLRGK+              NWLQVGDDLN RNL D AKK+GD+ +LRMGQRNLVVVSSP+ AK+VLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVY EHWRKMRRIMTVPFFTNKVVQQ RF WEDEAARVVEDVK +PEAATNGIVLR RLQL+MYNNMYRIMFDRRFES DDPLF +LKALNG
Sbjct:   22 ITISKLRGKKLKLPPGPIPVPVFGNWLQVGDDLNQRNLVDYAKKFGDLFMLRMGQRNLVVVSSPELAKDVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYSEHWRKMRRIMTVPFFTNKVVQQYRFGWEDEAARVVEDVKANPEAATNGIVLRNRLQLLMYNNMYRIMFDRRFESVDDPLFLKLKALNG 212          
BLAST of CN181929 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 9.949e-85
Identity = 153/191 (80.10%), Postives = 168/191 (87.96%), Query Frame = 3
Query:   75 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNG 647
            I +SKLRGK+              NWLQVGDDLNHRNL+DLAK++G++LLLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ R+ WE EAA VV+DVKK+P AAT GIV+RRRLQLMMYNNM+RIMFDRRFES+DDPLF +LKALNG
Sbjct:   21 ILISKLRGKKFKLPPGPIPVPIFGNWLQVGDDLNHRNLTDLAKRFGEILLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEAEAAAVVDDVKKNPAAATEGIVIRRRLQLMMYNNMFRIMFDRRFESEDDPLFLKLKALNG 211          
BLAST of CN181929 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 9.949e-85
Identity = 152/191 (79.58%), Postives = 167/191 (87.43%), Query Frame = 3
Query:   75 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNG 647
            I +SKLRG+R              NWLQVGDDLNHRNL+DLAK++GD+ LLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ RF WE EAA VV+DV+++P+AA  GIVLRRRLQLMMYNNMYRIMFDRRFES++DPLF +LKALNG
Sbjct:   21 IAISKLRGRRFKLPPGPIPVPIFGNWLQVGDDLNHRNLTDLAKRFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRFGWESEAASVVDDVRRNPDAAAGGIVLRRRLQLMMYNNMYRIMFDRRFESEEDPLFVKLKALNG 211          
BLAST of CN181929 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 3.781e-84
Identity = 152/191 (79.58%), Postives = 166/191 (86.91%), Query Frame = 3
Query:   75 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNG 647
            I VSKLRGKR              NWLQVGDDLNHRNL+ LAK++GD+ LLRMGQRNLVVVSSPD AKEVLHTQGVEFGSRTRNVVFDIFTG+GQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ R  WE EAA VV+DV+K+P+AA +G+V+RRRLQLMMYNNMYRIMFDRRFES++DPLF RLKALNG
Sbjct:   21 IVVSKLRGKRFKLPPGPLPVPIFGNWLQVGDDLNHRNLTQLAKRFGDIFLLRMGQRNLVVVSSPDLAKEVLHTQGVEFGSRTRNVVFDIFTGEGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRHGWEAEAAAVVDDVRKNPDAAVSGLVIRRRLQLMMYNNMYRIMFDRRFESEEDPLFQRLKALNG 211          
BLAST of CN181929 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 8.422e-84
Identity = 151/191 (79.06%), Postives = 165/191 (86.39%), Query Frame = 3
Query:   75 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNG 647
            I VS LRG++              NWLQVGDDLNHRNL+DLAKK+GD+ LLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ R  WE EAA VVEDVKK+P+AA +G V+RRRLQLMMYNNMYRIMFDRRFES++DP+F RL+ALNG
Sbjct:   21 IAVSTLRGRKFKLPPGPLPVPIFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRHGWESEAAAVVEDVKKNPDAAVSGTVIRRRLQLMMYNNMYRIMFDRRFESEEDPIFQRLRALNG 211          
BLAST of CN181929 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 2.450e-83
Identity = 151/191 (79.06%), Postives = 166/191 (86.91%), Query Frame = 3
Query:   75 ITVSKLRGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDDPLFNRLKALNG 647
            I +SKLRGKR              NWLQVGDDLNHRNL+DLAKK+G++ LLRMGQRNLVVVSSP+ AKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQ R  WE EAA VV+DVKK+P+AAT G+V+R+RLQLMMYNNM+RIMFDRRFES+DDPLF +LK LNG
Sbjct:   21 IFISKLRGKRFKLPPGPVPVPIFGNWLQVGDDLNHRNLTDLAKKFGEIFLLRMGQRNLVVVSSPNLAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRTGWEAEAAAVVDDVKKNPKAATEGVVIRKRLQLMMYNNMFRIMFDRRFESEDDPLFVKLKMLNG 211          
The following BLAST results are available for this feature:
BLAST of CN181929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
TCMO_POPKI7.865e-9084.82Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
TCMO_RUTGR4.315e-8884.29Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
TCMO_POPTM5.636e-8883.25Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_CATRO2.142e-8783.60Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
TCMO_PETCR9.949e-8581.15Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
TCMO_HELTU9.949e-8580.10Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
TCMO_GLYEC9.949e-8579.58Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
TCMO_PHAAU3.781e-8479.58Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
TCMO_SOYBN8.422e-8479.06Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
TCMO_ZINEL2.450e-8379.06Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001L01_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001L01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181929 ID=CN181929; Name=CN181929; organism=Citrus sinensis; type=EST; length=648bp
GGTTAATCGTAAAGATGGATCTCCTCTTGCTGGAAAAGACGCTTTTAGCC
CTCTTCGCCGCCGTTGTTGTCGCCATTACCGTCTCTAAACTCCGCGGAAA
GCGCTTCAAGCTCCCCCCCGGCCCCCTCCCCGTCCCCGTATTCGGCAACT
GGCTCCAGGTCGGCGATGACTTGAACCATCGGAACCTCTCCGACTTAGCC
AAGAAATATGGAGATGTCCTCCTCCTCCGCATGGGCCAGCGCAACCTCGT
CGTCGTCTCGTCGCCGGACCACGCCAAGGAGGTTCTGCACACGCAGGGAG
TGGAGTTCGGATCACGAACGAGGAACGTCGTGTTCGATATCTTCACTGGG
AAGGGCCAGGACATGGTGTTCACAGTGTACGGCGAGCACTGGCGGAAGAT
GCGGAGGATCATGACCGTCCCTTTCTTCACGAACAAAGTGGTTCAGCAGC
AGCGGTTTAATTGGGAAGACGAGGCCGCTAGAGTCGTTGAGGATGTTAAG
AAGGACCCCGAGGCGGCGACCAATGGGATCGTCTTGAGGAGGCGGCTGCA
GCTTATGATGTACAACAACATGTACAGGATTATGTTTGATAGAAGATTCG
AGAGTCAGGATGATCCTTTGTTTAACAGATTAAAGGCTTTGAATGGTG
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