CN181912
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181912 vs. ExPASy Swiss-Prot
Match: Y4466_ARATH (ZF-HD homeobox protein At4g24660 OS=Arabidopsis thaliana GN=At4g24660 PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 6.984e-41 Identity = 97/181 (53.59%), Postives = 110/181 (60.77%), Query Frame = 2 Query: 137 ATGPTAGGEGASAAARKSIRYRECLKNHAVSIGGHAVDGCGEFMAAGDEGTLESLKCAACNCHRNFHRKETDGASPLA-----YHHQQQQFSXXXXXXXXXXXXXXLHLT--AAQPRPLALPSSSAGGYSREEEDVSNPXXXXXXXXXTKKRHRTKFTAEQKEKMLGFAEQLGWRIQKHDE 658 AT GG G S IRYRECLKNHAV+IGGHAVDGC EFM +G++GTL++LKCAAC CHRNFHRKET+ A Y+++ Q LHLT AA RP A S +EED SNP T KR RTKFTAEQKEKML FAE+LGWRIQKHD+ Sbjct: 29 ATSSGGGGVGRSKGVGAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETESIGGRAHRVPTYYNRPPQ---------PHQPPGYLHLTSPAAPYRPPAA--------SGDEEDTSNP----SSSGGTTKRFRTKFTAEQKEKMLAFAERLGWRIQKHDD 188
BLAST of CN181912 vs. ExPASy Swiss-Prot
Match: Y5541_ARATH (ZF-HD homeobox protein At5g65410 OS=Arabidopsis thaliana GN=At5g65410 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.848e-34 Identity = 82/188 (43.62%), Postives = 100/188 (53.19%), Query Frame = 2 Query: 122 TNASKATGPTAGGEGAS-----AAARKSIRYRECLKNHAVSIGGHAVDGCGEFMAAGDEGTLESLKCAACNCHRNFHRKETDGASPLAYHHQQQQFSXXXXXXXXXXXXXXLHL----TAAQPRPLALPSSSAGGYSREEEDVSNPXXXXXXXXXTKKRHRTKFTAEQKEKMLGFAEQLGWRIQKHDE 658 T + + TG T+ G G R+RECLKN AV+IGGHAVDGCGEFM AG EGT+++LKCAAC CHRNFHRKE +HH Q + + A P LALP RE + +KRHRTKFTAEQKE+ML AE++GWRIQ+ D+ Sbjct: 45 TESHETTGTTSTGGGGGFMVVHGGGGSRFRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELP-----YFHHAPPQHQPPPPPPGFYRLPAPVSYRPPPSQAPPLQLALPPP-----QRERSEDPMETSSAEAGGGIRKRHRTKFTAEQKERMLALAERIGWRIQRQDD 222 The following BLAST results are available for this feature:
BLAST of CN181912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181912 ID=CN181912; Name=CN181912; organism=Citrus sinensis; type=EST; length=661bpback to top |