CN181908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181908 vs. ExPASy Swiss-Prot
Match: DSCR3_MOUSE (Down syndrome critical region protein 3 homolog OS=Mus musculus GN=Dscr3 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.467e-20 Identity = 50/129 (38.76%), Postives = 75/129 (58.14%), Query Frame = -1 Query: 268 STQCSLLDPIAGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVCRNMTLPIYVILPRLLTCPTVLAGPFSVEFKVSVVISFRSELSKLHKKSDPTTPRLWLAMETLPLELVRT 654 ST C++ P+ GEL VE S I SI++ L+R+E+ E + + IQ Q+ADGD+CRN+++P+Y++ PRL TCPT+ F VEF+V+VV+ ++ L E PL+L RT Sbjct: 184 STNCAITQPLTGELVVEHSDAAIRSIELQLVRVETCGCAEGYARDATEIQNIQIADGDICRNLSVPLYMVFPRLFTCPTLETTNFKVEFEVNVVVLLHAD---------------HLITENFPLKLCRT 297
BLAST of CN181908 vs. ExPASy Swiss-Prot
Match: DSCR3_PONAB (Down syndrome critical region protein 3 homolog OS=Pongo abelii GN=DSCR3 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.562e-19 Identity = 42/95 (44.21%), Postives = 64/95 (67.37%), Query Frame = -1 Query: 370 STQCSLLDPIAGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVCRNMTLPIYVILPRLLTCPTVLAGPFSVEFKVSVVI 654 ST C + P+ GEL VE+S I S+++ L+R+E+ E + + IQ Q+ADGDVCR +++PIY++ PRL TCPT+ F VEF+V++V+ Sbjct: 184 STNCVITQPLTGELVVESSEAAIRSVELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRGLSVPIYMVFPRLFTCPTLETTNFKVEFEVNIVV 278
BLAST of CN181908 vs. ExPASy Swiss-Prot
Match: DSCR3_HUMAN (Down syndrome critical region protein 3 OS=Homo sapiens GN=DSCR3 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.562e-19 Identity = 42/95 (44.21%), Postives = 64/95 (67.37%), Query Frame = -1 Query: 370 STQCSLLDPIAGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVCRNMTLPIYVILPRLLTCPTVLAGPFSVEFKVSVVI 654 ST C + P+ GEL VE+S I S+++ L+R+E+ E + + IQ Q+ADGDVCR +++PIY++ PRL TCPT+ F VEF+V++V+ Sbjct: 184 STNCVITQPLTGELVVESSEAAIRSVELQLVRVETCGCAEGYARDATEIQNIQIADGDVCRGLSVPIYMVFPRLFTCPTLETTNFKVEFEVNIVV 278
BLAST of CN181908 vs. ExPASy Swiss-Prot
Match: DSCR3_DICDI (Down syndrome critical region protein 3 homolog OS=Dictyostelium discoideum GN=DDB_G0292212 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.686e-14 Identity = 35/103 (33.98%), Postives = 64/103 (62.14%), Query Frame = -1 Query: 370 FKVTGKM-STQCSLLDPIAGELTVEASSVPIHSIDIHLLRMESILLGEKIISETSLIQTTQVADGDVCRNMTLPIYVILPRLLTCPTVLAGPFSVEFKVSVVI 675 FK++G + S C++ + G + +E++ I S+++ L+R+E+ + E + IQ Q+ADGD+ RN +P+Y++ PRL TC + F +EF+V++VI Sbjct: 184 FKISGGLVSAICNINEAFQGHMIIESADTVIKSVELQLVRVETCGCADGYAREVTEIQNIQIADGDIWRNFKIPLYMVFPRLFTCISTAGKTFKIEFEVNLVI 286 The following BLAST results are available for this feature:
BLAST of CN181908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181908 ID=CN181908; Name=CN181908; organism=Citrus sinensis; type=EST; length=678bpback to top |