CN181906

Overview
NameCN181906
Unique NameCN181906
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig760 contig Csv1_Contig760:923..1595. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181906 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.320e-55
Identity = 101/114 (88.60%), Postives = 110/114 (96.49%), Query Frame = -3
Query:  298 LSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 639
            LSL E+LCGFQF++THLDGRQLLIKS PGEVVKPDQFKAINDEGMPMYQRPFM+GKLYIHFSV+FP+SL+P+QCK LE VLPPRTSVQL+DMELDECEETTLHDVNIEEEMRRK
Sbjct:  276 LSLVESLCGFQFILTHLDGRQLLIKSLPGEVVKPDQFKAINDEGMPMYQRPFMKGKLYIHFSVEFPDSLNPEQCKALEGVLPPRTSVQLSDMELDECEETTLHDVNIEEEMRRK 389          
BLAST of CN181906 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 3.493e-55
Identity = 98/114 (85.96%), Postives = 107/114 (93.86%), Query Frame = -3
Query:  298 LSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 639
            LSLTEALCGFQFV+THLD RQLLIKS PGEV+KPDQFK INDEGMPMYQRPFMRGKLYIHFSVDFP+SL+PDQCK LE+VLP R + +LTDME+DECEETT+HDVNIEEEMRRK
Sbjct:  278 LSLTEALCGFQFVLTHLDNRQLLIKSNPGEVIKPDQFKGINDEGMPMYQRPFMRGKLYIHFSVDFPDSLTPDQCKALESVLPSRNASRLTDMEIDECEETTMHDVNIEEEMRRK 391          

HSP 2 Score: 24.2534 bits (51), Expect = 3.493e-55
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = -2
Query:  641 RKGDDLFVEHT 673
            RKGDDLF EH+
Sbjct:  267 RKGDDLFYEHS 277          
BLAST of CN181906 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 7.742e-55
Identity = 99/114 (86.84%), Postives = 107/114 (93.86%), Query Frame = -3
Query:  298 LSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 639
            LSLTEALCGFQFV+THLDGRQLLIKS PGEVVKPDQFKAINDEGMPMYQRPFMRGKLYI F VDFP+SL+PDQCK++E+VLP   S QLTDME+DECEETT+HDVNIEEEMRRK
Sbjct:  257 LSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIQFLVDFPDSLTPDQCKVIESVLPRSASSQLTDMEIDECEETTMHDVNIEEEMRRK 370          

HSP 2 Score: 24.2534 bits (51), Expect = 7.742e-55
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = -2
Query:  641 RKGDDLFVEHT 673
            RKGDDLF +HT
Sbjct:  246 RKGDDLFYKHT 256          
BLAST of CN181906 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 7.625e-52
Identity = 92/114 (80.70%), Postives = 105/114 (92.11%), Query Frame = -3
Query:  298 LSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 639
            LSLTEALCGFQFV+THLDGR LLIKS PGEVVKPD +KAI+DEGMP+YQRPFM+GKLYIHF+V+FP+SLSPDQ K LE VLP  ++ QL+DME+DECEETTLHDVNIE+EMRRK
Sbjct:  278 LSLTEALCGFQFVLTHLDGRSLLIKSNPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPDSLSPDQTKALEAVLPKPSTAQLSDMEIDECEETTLHDVNIEDEMRRK 391          

HSP 2 Score: 26.1794 bits (56), Expect = 7.625e-52
Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = -2
Query:  641 RKGDDLFVEHT 673
            RKG+DLFVEHT
Sbjct:  267 RKGEDLFVEHT 277          
BLAST of CN181906 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 1.835e-50
Identity = 91/114 (79.82%), Postives = 105/114 (92.11%), Query Frame = -3
Query:  298 LSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 639
            LSLTEALCGF+FV+THLDGRQLLIKS  GEVVKPDQFKAI DEGMP+YQRPFM+GK+YIHF+V+FP+SL+PDQ K LE +LPP+ S+ LT MELDECEETTLH+VNIEEEM+RK
Sbjct:  278 LSLTEALCGFRFVLTHLDGRQLLIKSNLGEVVKPDQFKAIEDEGMPIYQRPFMKGKMYIHFTVEFPDSLNPDQVKSLEAILPPKPSMSLTYMELDECEETTLHNVNIEEEMKRK 391          

HSP 2 Score: 24.2534 bits (51), Expect = 1.835e-50
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = -2
Query:  641 RKGDDLFVEHT 673
            RKG+DLF EHT
Sbjct:  267 RKGEDLFYEHT 277          
BLAST of CN181906 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 3.117e-50
Identity = 88/114 (77.19%), Postives = 104/114 (91.23%), Query Frame = -3
Query:  298 LSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 639
            +SLTEALCGFQFV+THLD RQLLIKS+PGEVVKPD +KAI+DEGMP+YQRPFM+GKLYIHF+V+FPESLSPDQ K +E VLP  T   ++DME+D+CEETTLHDVNIE+EM+RK
Sbjct:  279 ISLTEALCGFQFVLTHLDKRQLLIKSKPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPESLSPDQTKAIEAVLPKPTKAAISDMEIDDCEETTLHDVNIEDEMKRK 392          

HSP 2 Score: 26.1794 bits (56), Expect = 3.117e-50
Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = -2
Query:  641 RKGDDLFVEHT 673
            RKG+DLFVEHT
Sbjct:  268 RKGEDLFVEHT 278          
BLAST of CN181906 vs. ExPASy Swiss-Prot
Match: DNJA1_RAT (DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.377e-21
Identity = 52/115 (45.22%), Postives = 75/115 (65.22%), Query Frame = -3
Query:  301 LSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 639
            + L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  264 IQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
BLAST of CN181906 vs. ExPASy Swiss-Prot
Match: DNJA1_PONAB (DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.377e-21
Identity = 52/115 (45.22%), Postives = 75/115 (65.22%), Query Frame = -3
Query:  301 LSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 639
            + L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  263 IQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 373          
BLAST of CN181906 vs. ExPASy Swiss-Prot
Match: DNJA1_MOUSE (DnaJ homolog subfamily A member 1 OS=Mus musculus GN=Dnaja1 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.377e-21
Identity = 52/115 (45.22%), Postives = 75/115 (65.22%), Query Frame = -3
Query:  301 LSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 639
            + L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  264 IQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
BLAST of CN181906 vs. ExPASy Swiss-Prot
Match: DNJA1_HUMAN (DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 6.377e-21
Identity = 52/115 (45.22%), Postives = 75/115 (65.22%), Query Frame = -3
Query:  301 LSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 639
            + L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  264 IQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
The following BLAST results are available for this feature:
BLAST of CN181906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
DNJH_CUCSA2.320e-5588.60DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNJH2_ALLPO3.493e-5585.96DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNJH1_ALLPO7.742e-5586.84DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNAJ3_ARATH7.625e-5280.70Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNJH_ATRNU1.835e-5079.82DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNAJ2_ARATH3.117e-5077.19Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
DNJA1_RAT6.377e-2145.22DnaJ homolog subfamily A member 1 OS=Rattus norveg... [more]
DNJA1_PONAB6.377e-2145.22DnaJ homolog subfamily A member 1 OS=Pongo abelii ... [more]
DNJA1_MOUSE6.377e-2145.22DnaJ homolog subfamily A member 1 OS=Mus musculus ... [more]
DNJA1_HUMAN6.377e-2145.22DnaJ homolog subfamily A member 1 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001K12_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001K12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181906 ID=CN181906; Name=CN181906; organism=Citrus sinensis; type=EST; length=674bp
TTGTAACACTAAAAATATTAATTATGAGCATTGAGTCTGAAGGTGCAAAC
GCTAGAATTCCATTACATAGTCAGTTATCAGAAAAACATAAGAATAAAGA
CAGACAAACCAAAACTAGAACCTCTAAAGCCTATAACAGAAAATAAATAT
GTTGAGAATCTTTTTCTCCCAAACAATGAAAATACTAAATCAGGCCACCC
CTTTTCTTCTACATCATCACTGCTGAGCACACTGCACTCTCTGGGCACCA
CCTTGCATATCGTCATCTTCATCGTATGCCTCCTGAGCTGCTTGTTGCTT
CCTTCGCATTTCCTCCTCAATGTTCACATCATGCAGGGTTGTTTCTTCAC
ACTCATCCAGTTCCATATCGGTGAGCTGGACTGAGGTCCTTGGAGGTAGT
ACGGTCTCCAGCATCTTGCACTGGTCTGGGCTCAGTGACTCAGGGAAGTC
AACACTGAAATGAATGTACAGTTTGCCCCTCATAAATGGCCTCTGATACA
TAGGCATTCCTTCATCATTTATGGCCTTGAATTGGTCCGGCTTGACTACT
TCCCCAGGCTGGGATTTGATGAGGAGTTGCCGGCCATCCAAATGAGTTAT
TACAAATTGAAAGCCACAGAGAGCTTCTGTCAGTGACAGGGGTGTGCTCA
ACAAATAGGTCATCACCCTTTCGC
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