CN181905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181905 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.562e-16 Identity = 47/138 (34.06%), Postives = 75/138 (54.35%), Query Frame = 3 Query: 159 ESKKLWIVAAPAIFTRFSSFGLNVVSQAFIGHIGATQLAAYSLVFTVLLRFANGILLGMASALETLCGQAFGAKQYHMLGIYLQRSWIVLTICAXXXXXXXXXXXXXXVALGQEKNIAEIAGTISFMLIPVLFAFIIS 572 ESK LW ++ +I ++ L+ V+ F GH+G+ QLA S+ + A GI+LGMASA++T+CGQA+GA+QY +GI QR+ ++ A +GQ IA + +IP ++AF ++ Sbjct: 51 ESKLLWTLSGASIVVSVLNYMLSFVTVMFTGHLGSLQLAGASIATVGIQGLAYGIMLGMASAVQTVCGQAYGARQYSSMGIICQRAMVLHLAAAVFLTFLYWYSGPILKTMGQSVAIAHEGQIFARGMIPQIYAFALA 188
BLAST of CN181905 vs. ExPASy Swiss-Prot
Match: S47A1_XENTR (Multidrug and toxin extrusion protein 1 OS=Xenopus tropicalis GN=slc47a1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.513e-11 Identity = 36/136 (26.47%), Postives = 67/136 (49.26%), Query Frame = 3 Query: 147 KLWVESKKLWIVAAPAIFTRFSSFGLNVVSQAFIGHIGATQLAAYSLVFTVLLRFANGILLGMASALETLCGQAFGAKQYHMLGIYLQRSWIVLTICAXXXXXXXXXXXXXXVALGQEKNIAEIAGTISFMLIPVL 554 ++W E+++L +AAPA ++ F +++VS F GH+G +L A SL T++ + G+A A +TL Q FG ++GI LQR ++L + + Q+ ++++ + +P L Sbjct: 44 EVWQEAQQLLALAAPAFLSQLMIFLISIVSSIFCGHLGKVELDAVSLAITIINITGVAVGTGLAGACDTLISQTFGGSNLKLVGIILQRGILILLLFCFPCWALLINTESILLLFRQDPEVSKLTQIYVLIFLPAL 179
BLAST of CN181905 vs. ExPASy Swiss-Prot
Match: S47A2_MOUSE (Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.370e-11 Identity = 38/132 (28.79%), Postives = 64/132 (48.48%), Query Frame = 3 Query: 159 ESKKLWIVAAPAIFTRFSSFGLNVVSQAFIGHIGATQLAAYSLVFTVLLRFANGILLGMASALETLCGQAFGAKQYHMLGIYLQRSWIVLTICAXXXXXXXXXXXXXXVALGQEKNIAEIAGTISFMLIPVL 554 E+ L +A P + F +++VS F GH+G +L A +L +V+ + G+ASA +TL Q+FG K +G+ LQR ++L +C + L Q+ ++A +A + IP L Sbjct: 43 EAAALVALAGPVFLAQLMIFLISIVSSIFCGHLGKVELDAVTLAVSVVNVTGISVGTGLASACDTLMSQSFGGKNLKRVGVILQRGILILLLCCFPCWAIFLNTERLLLLLRQDPDVARLAQVYVMICIPAL 174 The following BLAST results are available for this feature:
BLAST of CN181905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181905 ID=CN181905; Name=CN181905; organism=Citrus sinensis; type=EST; length=579bpback to top |