CN181894
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: R15A5_ARATH (40S ribosomal protein S15a-5 OS=Arabidopsis thaliana GN=RPS15AE PE=2 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 6.785e-57 Identity = 104/129 (80.62%), Postives = 119/129 (92.25%), Query Frame = 1 Query: 151 MGRRILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 MGRRILNDALR IVNAERRGKA+VEL+PISTVMSSFL IMK +GYIK+FQ+YDPHRVG+I V+L GRVNDC+ LTYRQDV+A+EIE YT LPTRQWGYVVITTPDG+LDHEEA++RNVGGQVLG+F+ Sbjct: 1 MGRRILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDLQGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNVGGQVLGFFY 129
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: R15A2_ARATH (40S ribosomal protein S15a-2 OS=Arabidopsis thaliana GN=RPS15AB PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 9.798e-56 Identity = 101/129 (78.29%), Postives = 117/129 (90.70%), Query Frame = 1 Query: 151 MGRRILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 MGRRILNDALR IVNAE+RGKA+VEL+P+STVMSSFL IMK +GYIK+FQ++DPHRVG+I V+L GRVNDC+ LTYRQDVKA EI YT LPTRQWGY+VITTPDG+LDHEEA++RNVGGQVLG+FH Sbjct: 1 MGRRILNDALRTIVNAEKRGKASVELKPVSTVMSSFLKIMKEKGYIKNFQVHDPHRVGRITVDLQGRVNDCKALTYRQDVKANEIGQYTERTLPTRQWGYIVITTPDGILDHEEAIKRNVGGQVLGFFH 129
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: RS15A_BRANA (40S ribosomal protein S15a OS=Brassica napus GN=RPS15A PE=2 SV=3) HSP 1 Score: 141.739 bits (356), Expect = 3.067e-33 Identity = 67/125 (53.60%), Postives = 94/125 (75.20%), Query Frame = 1 Query: 163 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 +LNDAL+++ NAE+RGK V ++P S V+ FL +M+ GYI +F+ D HR GKI VEL GR+N C ++ R DV +EIEG+T LP+RQ+GY+V+TT G++DHEEA R+NVGG+VLG+F+ Sbjct: 6 VLNDALKSMFNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: R15A1_ARATH (40S ribosomal protein S15a-1 OS=Arabidopsis thaliana GN=RPS15AA PE=2 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 3.067e-33 Identity = 67/125 (53.60%), Postives = 94/125 (75.20%), Query Frame = 1 Query: 163 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 +LNDAL+++ NAE+RGK V ++P S V+ FL +M+ GYI +F+ D HR GKI VEL GR+N C ++ R DV +EIEG+T LP+RQ+GY+V+TT G++DHEEA R+NVGG+VLG+F+ Sbjct: 6 VLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: RS15A_DAUCA (40S ribosomal protein S15a OS=Daucus carota GN=RPS15A PE=2 SV=3) HSP 1 Score: 139.043 bits (349), Expect = 1.988e-32 Identity = 66/125 (52.80%), Postives = 93/125 (74.40%), Query Frame = 1 Query: 163 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 +LNDAL+++ NAE+RGK V ++P S V+ FL +M+ GYI +F+ D HR GKI VEL GR+N C ++ R DV +EIE +T LP+RQ+GY+V+TT G++DHEEA R+NVGG+VLG+F+ Sbjct: 6 VLNDALKSMFNAEKRGKRQVMIRPSSKVVIKFLMVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: R15A4_ARATH (40S ribosomal protein S15a-4 OS=Arabidopsis thaliana GN=RPS15AD PE=2 SV=3) HSP 1 Score: 138.658 bits (348), Expect = 2.596e-32 Identity = 65/125 (52.00%), Postives = 93/125 (74.40%), Query Frame = 1 Query: 163 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 +LND L+++ NAE+RGK V ++P S V+ FL +M+ GYI +F+ D HR GKI VEL GR+N C ++ R DV +EIEG+T LP+RQ+G++V+TT G++DHEEA R+NVGG+VLG+F+ Sbjct: 6 VLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: R15A3_ARATH (40S ribosomal protein S15a-3 OS=Arabidopsis thaliana GN=RPS15AC PE=2 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 2.596e-32 Identity = 63/125 (50.40%), Postives = 94/125 (75.20%), Query Frame = 1 Query: 163 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYFH 537 +LND L+++ NAE++GK V ++P S V+ FL +M+ GYI +F+ D HR GKI VEL GR+N+C ++ R D+ +EIEG+T LP+RQ+GY+V+TT G++DHEEA ++NVGG+VLG+F+ Sbjct: 6 VLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGKIVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQFGYIVLTTSAGIMDHEEARKKNVGGKVLGFFY 130
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: RS15A_DROYA (40S ribosomal protein S15a OS=Drosophila yakuba GN=RpS15Aa PE=2 SV=3) HSP 1 Score: 130.568 bits (327), Expect = 7.071e-30 Identity = 63/124 (50.81%), Postives = 89/124 (71.77%), Query Frame = 1 Query: 163 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYF 534 +L DAL+ I NAE+RGK V L+P S V+ FL +M GYI +F++ D HR GKI V L GR+N C ++ R DV +IE +T + LP+RQ+GYVV+TT G++DHEEA R+++GG++LG+F Sbjct: 6 VLADALKCINNAEKRGKRQVLLRPCSKVIIKFLTVMMKHGYIGEFEIVDDHRSGKIVVNLTGRLNKCGVISPRFDVPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILGFF 129
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: RS15A_DROME (40S ribosomal protein S15Aa OS=Drosophila melanogaster GN=RpS15Aa PE=2 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 7.071e-30 Identity = 63/124 (50.81%), Postives = 89/124 (71.77%), Query Frame = 1 Query: 163 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYF 534 +L DAL+ I NAE+RGK V L+P S V+ FL +M GYI +F++ D HR GKI V L GR+N C ++ R DV +IE +T + LP+RQ+GYVV+TT G++DHEEA R+++GG++LG+F Sbjct: 6 VLADALKCINNAEKRGKRQVLLRPCSKVIIKFLTVMMKHGYIGEFEIVDDHRSGKIVVNLTGRLNKCGVISPRFDVPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILGFF 129
BLAST of CN181894 vs. ExPASy Swiss-Prot
Match: RS15B_DROME (40S ribosomal protein S15Ab OS=Drosophila melanogaster GN=RpS15Ab PE=2 SV=3) HSP 1 Score: 128.257 bits (321), Expect = 3.509e-29 Identity = 61/124 (49.19%), Postives = 88/124 (70.97%), Query Frame = 1 Query: 163 ILNDALRAIVNAERRGKATVELQPISTVMSSFLNIMKYRGYIKDFQLYDPHRVGKIKVELLGRVNDCRGLTYRQDVKAREIEGYTVHALPTRQWGYVVITTPDGVLDHEEALRRNVGGQVLGYF 534 +L DAL+ I NAE+RGK V L+P S V+ FL +M GYI +F++ + HR GKI V L GR+N C ++ R D +IE +T + LP+RQ+GYVV+TT G++DHEEA R+++GG++LG+F Sbjct: 6 VLADALKCINNAEKRGKRQVLLRPCSKVIIKFLTVMMKHGYIGEFEIVEDHRAGKIVVNLTGRLNKCGVISPRFDAPINDIEKWTNNLLPSRQFGYVVLTTSGGIMDHEEARRKHLGGKILGFF 129 The following BLAST results are available for this feature:
BLAST of CN181894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181894 ID=CN181894; Name=CN181894; organism=Citrus sinensis; type=EST; length=648bpback to top |