CN181889

Overview
NameCN181889
Unique NameCN181889
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length469
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4158 contig Csv1_Contig4158:785..1253. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181889 vs. ExPASy Swiss-Prot
Match: ANXD2_ARATH (Annexin D2 OS=Arabidopsis thaliana GN=ANN2 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 2.130e-32
Identity = 65/89 (73.03%), Postives = 76/89 (85.39%), Query Frame = -2
Query:  202 YLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLGHGDA 468
            Y+ LLRA + CL  PE +FEK+LRL+INK GTDE  LTRVVTTR EVD++ IK+EYQRRNS+PLDRA+ KDTSGDYE ML+ALLGHGDA
Sbjct:  229 YMKLLRAVITCLTYPEKHFEKVLRLSINKMGTDEWGLTRVVTTRTEVDMERIKEEYQRRNSIPLDRAIAKDTSGDYEDMLVALLGHGDA 317          
BLAST of CN181889 vs. ExPASy Swiss-Prot
Match: ANXD1_ARATH (Annexin D1 OS=Arabidopsis thaliana GN=ANN1 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 4.745e-32
Identity = 65/89 (73.03%), Postives = 77/89 (86.52%), Query Frame = -2
Query:  202 YLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLGHGDA 468
            +L LLR+T+QCL RPE YF  +LR AINK GTDEGALTR+VTTRAE+DLKVI +EYQRRNS+PL++A+ KDT GDYEKML+ALLG  DA
Sbjct:  229 FLALLRSTIQCLTRPELYFVDVLRSAINKTGTDEGALTRIVTTRAEIDLKVIGEEYQRRNSIPLEKAITKDTRGDYEKMLVALLGEDDA 317          
BLAST of CN181889 vs. ExPASy Swiss-Prot
Match: ANXD6_ARATH (Annexin D6 OS=Arabidopsis thaliana GN=ANN6 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 7.576e-30
Identity = 63/89 (70.79%), Postives = 73/89 (82.02%), Query Frame = -2
Query:  202 YLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLGHGDA 468
            Y+ LL+  ++CL  PE YFEK+LR AIN+ GTDE ALTRVVTTRAEVDL+ IK+EY RRNSVPLDRA+  DTSGDY+ MLLALLGH  A
Sbjct:  230 YVQLLKTAIKCLTYPEKYFEKVLRRAINRMGTDEWALTRVVTTRAEVDLERIKEEYLRRNSVPLDRAIANDTSGDYKDMLLALLGHDHA 318          
BLAST of CN181889 vs. ExPASy Swiss-Prot
Match: ANXD7_ARATH (Annexin D7 OS=Arabidopsis thaliana GN=ANNAT7 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 3.760e-29
Identity = 62/89 (69.66%), Postives = 72/89 (80.90%), Query Frame = -2
Query:  202 YLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLGHGDA 468
            Y+ LL+A ++CL  PE YFEK+LR AINK GTDE  LTRVVTTRAE D++ IK+EY RRNSVPLDRA+ KDT GDYE +LLALLGH  A
Sbjct:  228 YIQLLKAVIKCLTYPEKYFEKVLRQAINKLGTDEWGLTRVVTTRAEFDMERIKEEYIRRNSVPLDRAIAKDTHGDYEDILLALLGHDHA 316          
BLAST of CN181889 vs. ExPASy Swiss-Prot
Match: ANX4_FRAAN (Annexin-like protein RJ4 OS=Fragaria ananassa PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 1.295e-21
Identity = 50/84 (59.52%), Postives = 63/84 (75.00%), Query Frame = -2
Query:  205 LRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLGHGD 456
            L   ++CL  P+ YFEK+LR AI + GTDE ALTRV+ TRAE DL+ IK+ Y ++NSVPL++AV KDTSGDY+  LL LLG  D
Sbjct:  231 LHTAIRCLNDPKKYFEKVLRNAIKRVGTDEDALTRVIVTRAERDLRDIKEVYYKKNSVPLEQAVAKDTSGDYKAFLLTLLGKED 314          
BLAST of CN181889 vs. ExPASy Swiss-Prot
Match: ANXD3_ARATH (Annexin D3 OS=Arabidopsis thaliana GN=ANN3 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 2.215e-13
Identity = 34/82 (41.46%), Postives = 52/82 (63.41%), Query Frame = -2
Query:  214 LLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLG 459
            LL+  + C+  PE +F K++R +I   GTDE +LTR + TRAE+DL  ++ EY    +  +D A+  D SGDY+  ++ LLG
Sbjct:  237 LLKVAIFCIDTPEKHFAKVVRDSIEGFGTDEDSLTRAIVTRAEIDLMKVRGEYFNMYNTSMDNAITGDISGDYKDFIITLLG 318          
BLAST of CN181889 vs. ExPASy Swiss-Prot
Match: ANX10_DROME (Annexin-B10 OS=Drosophila melanogaster GN=AnnX PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 1.099e-12
Identity = 35/83 (42.17%), Postives = 54/83 (65.06%), Query Frame = -2
Query:  214 DLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLG 462
            + + A V+C+  P  +F   L  A+N  GTD+  L R++ +R+E+DL+ IK E++R  +  L  AVV +TSGDY++ L ALLG
Sbjct:  236 EAMMAIVECVQSPAAFFANRLYKAMNGAGTDDATLIRIIVSRSEIDLETIKQEFERIYNRTLHSAVVAETSGDYKRALTALLG 318          
BLAST of CN181889 vs. ExPASy Swiss-Prot
Match: ANXA7_XENLA (Annexin A7 OS=Xenopus laevis GN=anxa7 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.876e-11
Identity = 33/84 (39.29%), Postives = 49/84 (58.33%), Query Frame = -2
Query:  211 DLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALLGH 462
            D L+A +QC +    +F   L  ++   GTD+  L R++ TR+E+DL  IK  Y +     L  A+  DTSG Y++MLLA+ GH
Sbjct:  429 DGLKAVLQCAINRPLFFRDRLCRSMKGAGTDDSTLIRIIVTRSEIDLVQIKQAYVQMYQKSLSAAISSDTSGAYKRMLLAISGH 512          
BLAST of CN181889 vs. ExPASy Swiss-Prot
Match: ANX13_HUMAN (Annexin A13 OS=Homo sapiens GN=ANXA13 PE=1 SV=3)

HSP 1 Score: 66.2402 bits (160), Expect = 7.876e-11
Identity = 38/84 (45.24%), Postives = 50/84 (59.52%), Query Frame = -2
Query:  217 YLDLLRATVQCLVRPEHYFEKILRLAINKQGTDEGALTRVVTTRAEVDLKVIKDEYQRRNSVPLDRAVVKDTSGDYEKMLLALL 468
            YL L+R    C    E YF + L  ++   GTDE  L R+V TRAEVDL+ IK ++Q +    L   V  DTSGD+ K+L+ALL
Sbjct:  236 YLTLVRCAQDC----EDYFAERLYKSMKGAGTDEETLIRIVVTRAEVDLQGIKAKFQEKYQKSLSDMVRSDTSGDFRKLLVALL 315          
The following BLAST results are available for this feature:
BLAST of CN181889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
ANXD2_ARATH2.130e-3273.03Annexin D2 OS=Arabidopsis thaliana GN=ANN2 PE=2 SV... [more]
ANXD1_ARATH4.745e-3273.03Annexin D1 OS=Arabidopsis thaliana GN=ANN1 PE=1 SV... [more]
ANXD6_ARATH7.576e-3070.79Annexin D6 OS=Arabidopsis thaliana GN=ANN6 PE=2 SV... [more]
ANXD7_ARATH3.760e-2969.66Annexin D7 OS=Arabidopsis thaliana GN=ANNAT7 PE=2 ... [more]
ANX4_FRAAN1.295e-2159.52Annexin-like protein RJ4 OS=Fragaria ananassa PE=2... [more]
ANXD3_ARATH2.215e-1341.46Annexin D3 OS=Arabidopsis thaliana GN=ANN3 PE=2 SV... [more]
ANX10_DROME1.099e-1242.17Annexin-B10 OS=Drosophila melanogaster GN=AnnX PE=... [more]
ANXA7_XENLA7.876e-1139.29Annexin A7 OS=Xenopus laevis GN=anxa7 PE=2 SV=1[more]
ANX13_HUMAN7.876e-1145.24Annexin A13 OS=Homo sapiens GN=ANXA13 PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0001K02_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001K02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181889 ID=CN181889; Name=CN181889; organism=Citrus sinensis; type=EST; length=469bp
GAGGGTTTCATAGCAAATGCTGTCACCATCTTATTTATAAGATCATAGAT
TAAGTTTTTCAACCGGCATAACCAAAAGACTGAAAATAAAACGATCATCA
CACATGGATAGAGAACACTGCAAACTCCAAGCAACAGCAAACCTAGATAA
ATAAAACACATATATTGCCTCTCAATCCTTCAAGAAATAGGGAACAACTC
AAGCATCCCCATGTCCTAAAAGTGCCAGAAGCATTTTTTCGTAGTCCCCA
GAGGTGTCCTTGACAACGGCGCGATCCAGAGGAACACTGTTCCTCCTCTG
GTACTCATCTTTTATGACCTTCAAGTCGACCTCGGCCCTTGTGGTGACGA
CTCTAGTAAGAGCCCCTTCATCTGTTCCCTGTTTGTTAATTGCCAGACGA
AGTATCTTCTCAAAATAATGTTCAGGGCGGACTAAGCACTGAACTGTGGC
CCTCAGTAGGTCGAGGTAC
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