CN188774

Overview
NameCN188774
Unique NameCN188774
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10309 contig Csv1_Contig10309:252..908. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188774 vs. ExPASy Swiss-Prot
Match: FHIT_BOVIN (Bis(5'-adenosyl)-triphosphatase OS=Bos taurus GN=FHIT PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.993e-15
Identity = 45/92 (48.91%), Postives = 56/92 (60.87%), Query Frame = -2
Query:  385 ETRDLGLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHIHIVPRKAASSEENDGNKDVKEK-QKLDLDIQMKNRTMEEMAQEADEYR 657
            E  DL   AQ VGT +E + + +SL F++QDGP+AGQTV HVH+HI+PRKA     ND   D  EK  + D D     R+ EEMA EA   R
Sbjct:   54 EVADLFQAAQRVGTVVEKHFQGTSLTFSMQDGPEAGQTVKHVHVHILPRKAGDFHRNDSIYDALEKHDREDKDSPALWRSEEEMAAEAAALR 145          
BLAST of CN188774 vs. ExPASy Swiss-Prot
Match: NFT1_CAEEL (Nitrilase and fragile histidine triad fusion protein NitFhit OS=Caenorhabditis elegans GN=nft-1 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.520e-14
Identity = 40/94 (42.55%), Postives = 58/94 (61.70%), Query Frame = -2
Query:  376 ETRDLGLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHIHIVPRKAASSEENDGNKDVKEKQKLDLDIQMKNRTMEEMAQEADEYRSLL 657
            ET DL + A+ V   LE +H  +S    +QDG  AGQTVPHVHIHI+PR+A    +N+  + +    K   + + K R+ E+MA+EA  YR+L+
Sbjct:  350 ETADLFIVAKKVQAMLEKHHNVTSTTICVQDGKDAGQTVPHVHIHILPRRAGDFGDNEIYQKLASHDK---EPERKPRSNEQMAEEAVVYRNLM 440          
BLAST of CN188774 vs. ExPASy Swiss-Prot
Match: FHIT_HUMAN (Bis(5'-adenosyl)-triphosphatase OS=Homo sapiens GN=FHIT PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 9.416e-14
Identity = 41/91 (45.05%), Postives = 54/91 (59.34%), Query Frame = -2
Query:  385 ETRDLGLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHIHIVPRKAASSEENDGNKDVKEKQKLDLDIQMKNRTMEEMAQEADEYR 657
            E  DL  T Q VGT +E +   +SL F++QDGP+AGQTV HVH+H++PRKA     ND   +  +K   + D     R+ EEMA EA   R
Sbjct:   54 EVADLFQTTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFHRNDSIYEELQKHDKE-DFPASWRSEEEMAAEAAALR 143          
BLAST of CN188774 vs. ExPASy Swiss-Prot
Match: FHIT_RAT (Bis(5'-adenosyl)-triphosphatase OS=Rattus norvegicus GN=Fhit PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.578e-13
Identity = 40/93 (43.01%), Postives = 57/93 (61.29%), Query Frame = -2
Query:  382 ETRDLGLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHIHIVPRKAASSEENDGNKDVKEK-QKLDLDIQMKNRTMEEMAQEADEYRS 657
            E  DL    Q VGT +E + + +S+ F++QDGP+AGQTV HVH+HI+PRK+     ND   D  +K  + + D     R+ EEMA EA+  R+
Sbjct:   54 EVADLFQVTQRVGTVVEKHFQGTSITFSMQDGPEAGQTVKHVHVHILPRKSGDFRRNDNIYDELQKHDREEEDSPAFWRSEEEMAAEAEVLRA 146          
BLAST of CN188774 vs. ExPASy Swiss-Prot
Match: FHIT_MOUSE (Bis(5'-adenosyl)-triphosphatase OS=Mus musculus GN=Fhit PE=2 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 7.971e-13
Identity = 39/92 (42.39%), Postives = 56/92 (60.87%), Query Frame = -2
Query:  385 ETRDLGLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHIHIVPRKAASSEENDGNKDVKEK-QKLDLDIQMKNRTMEEMAQEADEYR 657
            E  DL    Q VGT +E + + +S+ F++QDGP+AGQTV HVH+H++PRKA     ND   D  +K  + + D     R+ +EMA EA+  R
Sbjct:   54 EVADLFQVTQRVGTVVEKHFQGTSITFSMQDGPEAGQTVKHVHVHVLPRKAGDFPRNDNIYDELQKHDREEEDSPAFWRSEKEMAAEAEALR 145          
BLAST of CN188774 vs. ExPASy Swiss-Prot
Match: FHIT_DICDI (Bis(5'-adenosyl)-triphosphatase OS=Dictyostelium discoideum GN=fhit PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.360e-12
Identity = 40/96 (41.67%), Postives = 55/96 (57.29%), Query Frame = -2
Query:  370 ETRDLGLTAQTVGTQLESYHKASSLAFAIQDGPQAGQTVPHVHIHIVPRKAASSEENDGNKDVKEKQKLDLDIQMKNRTMEEMAQEADEYRSLLSK 657
            E  DL L+AQ + + +E +     + FAIQDG  AGQTV HVHIHI+PRK    E ND   +  EK++       + R+ EEM +E+ E R L  +
Sbjct:   55 EFTDLWLSAQRISSVVEEHFNGDGITFAIQDGKNAGQTVEHVHIHIIPRKKFDFENNDQIYNEIEKER-------EPRSYEEMEKESSELRPLFEE 143          
The following BLAST results are available for this feature:
BLAST of CN188774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
FHIT_BOVIN4.993e-1548.91Bis(5'-adenosyl)-triphosphatase OS=Bos taurus GN=F... [more]
NFT1_CAEEL5.520e-1442.55Nitrilase and fragile histidine triad fusion prote... [more]
FHIT_HUMAN9.416e-1445.05Bis(5'-adenosyl)-triphosphatase OS=Homo sapiens GN... [more]
FHIT_RAT3.578e-1343.01Bis(5'-adenosyl)-triphosphatase OS=Rattus norvegic... [more]
FHIT_MOUSE7.971e-1342.39Bis(5'-adenosyl)-triphosphatase OS=Mus musculus GN... [more]
FHIT_DICDI1.360e-1241.67Bis(5'-adenosyl)-triphosphatase OS=Dictyostelium d... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0006M02_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006M02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188774 ID=CN188774; Name=CN188774; organism=Citrus sinensis; type=EST; length=658bp
TTTTTTTTTGAACAAGCAAAAAGCACTCACTTTGTACCCCATTTAAGAAA
CTTATTCAAACATTTATCATGACATTAGTACTTTAAGTAGCTCAAAACTA
AATACAACACACTTAGATTGATAAAAGACATGCATAATAAACTTAGAATT
TCAGGAATTCCAGACGCAACAAGAGGACGAGTGAAGGATTATTCTGCATA
GGTATGATGTATAATAATTCTATGAAAGCCCCAATGCTTAGCGTAAGTAT
TATAAATGTTTATAAACTTCCATGAAGTATTATTGAAGGGCAGTTTCTTA
AATCTCAAACGCATTGGAGGCAGCTTTGATGAAAGCTTGAGAAAAGCTTA
GCGAAAGGCAGTGTTAAATTTTTGACAAAAGCGACCTGTACTCATCAGCC
TCTTGAGCCATCTCCTCCATGGTCCTGTTCTTCATTTGAATATCTAAATC
AAGCTTCTGCTTCTCCTTCACATCTTTATTCCCATCATTTTCCTCAGAGC
TGGCAGCTTTGCGTGGGACAATATGGATGTGAACATGGGGCACTGTCTGT
CCAGCTTGAGGTCCATCTTGAATGGCAAATGCTAGTGATGAAGCCTTGTG
GTAGCTTTCGAGCTGTGTGCCAACCGTCTGGGCCGTGAGCCCTAAATCAC
GGGTCTCA
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