CN181888

Overview
NameCN181888
Unique NameCN181888
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length207
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4158 contig Csv1_Contig4158:140..346. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181888 vs. ExPASy Swiss-Prot
Match: ANXD1_ARATH (Annexin D1 OS=Arabidopsis thaliana GN=ANN1 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.231e-22
Identity = 48/67 (71.64%), Postives = 57/67 (85.07%), Query Frame = 2
Query:    5 TEDCEQLRKAFEGWGTNEQLII*KLAHRNAAQRKLIRQTYADTQGEDLLKSLDKELTNDFERVVMLW 205
            ++D EQLR AFEGWGTNE LII  LAHR+A QRK+IRQ Y +T GEDLLK+LDKEL+NDFER ++LW
Sbjct:   14 SDDAEQLRTAFEGWGTNEDLIISILAHRSAEQRKVIRQAYHETYGEDLLKTLDKELSNDFERAILLW 80          
BLAST of CN181888 vs. ExPASy Swiss-Prot
Match: ANXD2_ARATH (Annexin D2 OS=Arabidopsis thaliana GN=ANN2 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.100e-21
Identity = 49/66 (74.24%), Postives = 54/66 (81.82%), Query Frame = 2
Query:    8 EDCEQLRKAFEGWGTNEQLII*KLAHRNAAQRKLIRQTYADTQGEDLLKSLDKELTNDFERVVMLW 205
            +D EQL KAF GWGTNE+LII  LAHRNAAQR LIR  YA T  EDLLK+LDKEL++DFER VMLW
Sbjct:   15 DDAEQLHKAFSGWGTNEKLIISILAHRNAAQRSLIRSVYAATYNEDLLKALDKELSSDFERAVMLW 80          
BLAST of CN181888 vs. ExPASy Swiss-Prot
Match: ANXD7_ARATH (Annexin D7 OS=Arabidopsis thaliana GN=ANNAT7 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.755e-19
Identity = 44/66 (66.67%), Postives = 50/66 (75.76%), Query Frame = 2
Query:    8 EDCEQLRKAFEGWGTNEQLII*KLAHRNAAQRKLIRQTYADTQGEDLLKSLDKELTNDFERVVMLW 205
            ED EQL KAF+GWGTNE++II  LAHRNA QR  IR  YA    +DLLK LD+EL+ DFER VMLW
Sbjct:   15 EDAEQLYKAFKGWGTNERMIISILAHRNATQRSFIRAVYAANYNKDLLKELDRELSGDFERAVMLW 80          
BLAST of CN181888 vs. ExPASy Swiss-Prot
Match: ANXD6_ARATH (Annexin D6 OS=Arabidopsis thaliana GN=ANN6 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.664e-18
Identity = 45/66 (68.18%), Postives = 49/66 (74.24%), Query Frame = 2
Query:    8 EDCEQLRKAFEGWGTNEQLII*KLAHRNAAQRKLIRQTYADTQGEDLLKSLDKELTNDFERVVMLW 205
            ED EQL KAF+GWGTNE +II  LAHRNA QR  IR  YA    +DLLK LD EL+ DFERVVMLW
Sbjct:   15 EDSEQLHKAFKGWGTNEGMIISILAHRNATQRSFIRAVYAANYNKDLLKELDGELSGDFERVVMLW 80          
BLAST of CN181888 vs. ExPASy Swiss-Prot
Match: ANX4_FRAAN (Annexin-like protein RJ4 OS=Fragaria ananassa PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 2.486e-14
Identity = 38/66 (57.58%), Postives = 44/66 (66.67%), Query Frame = 2
Query:    8 EDCEQLRKAFEGWGTNEQLII*KLAHRNAAQRKLIRQTYADTQGEDLLKSLDKELTNDFERVVMLW 205
            ED E LRK+ +GWGTNE+ II  L HRNA QRK IR  Y     EDLLK L+ EL+ DFE+ V  W
Sbjct:   14 EDAEALRKSVKGWGTNEKAIISILGHRNAGQRKEIRAAYEQLYQEDLLKPLESELSGDFEKAVYRW 79          
BLAST of CN181888 vs. ExPASy Swiss-Prot
Match: ANXA4_MOUSE (Annexin A4 OS=Mus musculus GN=Anxa4 PE=2 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 3.360e-11
Identity = 33/65 (50.77%), Postives = 46/65 (70.77%), Query Frame = 2
Query:    5 TEDCEQLRKAFEGWGTNEQLII*KLAHRNAAQRKLIRQTYADTQGEDLLKSLDKELTNDFERVVM 199
            TED + LRKA +G GT+E  II  LA+RN AQR+ IR  Y  T G DL++ L  EL+++FE+V++
Sbjct:   17 TEDAQTLRKAMKGLGTDEDAIIGILAYRNTAQRQEIRSAYKSTIGRDLIEDLKSELSSNFEQVIL 81          
BLAST of CN181888 vs. ExPASy Swiss-Prot
Match: ANXA4_RAT (Annexin A4 OS=Rattus norvegicus GN=Anxa4 PE=1 SV=3)

HSP 1 Score: 65.4698 bits (158), Expect = 9.777e-11
Identity = 34/65 (52.31%), Postives = 45/65 (69.23%), Query Frame = 2
Query:    5 TEDCEQLRKAFEGWGTNEQLII*KLAHRNAAQRKLIRQTYADTQGEDLLKSLDKELTNDFERVVM 199
            TED + LRKA +G GT+E  II  LA RN AQR+ IR  Y  T G DLL+ L  EL+++FE+V++
Sbjct:   17 TEDAQVLRKAMKGLGTDEDAIIGVLACRNTAQRQEIRTAYKSTIGRDLLEDLKSELSSNFEQVIL 81          
The following BLAST results are available for this feature:
BLAST of CN181888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
ANXD1_ARATH4.231e-2271.64Annexin D1 OS=Arabidopsis thaliana GN=ANN1 PE=1 SV... [more]
ANXD2_ARATH2.100e-2174.24Annexin D2 OS=Arabidopsis thaliana GN=ANN2 PE=2 SV... [more]
ANXD7_ARATH9.755e-1966.67Annexin D7 OS=Arabidopsis thaliana GN=ANNAT7 PE=2 ... [more]
ANXD6_ARATH1.664e-1868.18Annexin D6 OS=Arabidopsis thaliana GN=ANN6 PE=2 SV... [more]
ANX4_FRAAN2.486e-1457.58Annexin-like protein RJ4 OS=Fragaria ananassa PE=2... [more]
ANXA4_MOUSE3.360e-1150.77Annexin A4 OS=Mus musculus GN=Anxa4 PE=2 SV=3[more]
ANXA4_RAT9.777e-1152.31Annexin A4 OS=Rattus norvegicus GN=Anxa4 PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0001K02_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001K02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181888 ID=CN181888; Name=CN181888; organism=Citrus sinensis; type=EST; length=207bp
AGTTACCGAAGACTGCGAGCAGCTCAGAAAAGCCTTTGAAGGATGGGGAA
CAAACGAGCAACTGATCATATAAAAACTGGCTCACAGAAATGCTGCTCAA
CGCAAGTTGATTCGACAAACATATGCTGATACTCAAGGCGAAGACCTCCT
CAAGTCGCTCGATAAGGAACTCACTAATGACTTTGAGAGGGTGGTGATGC
TCTGGAC
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