CN181830
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181830 vs. ExPASy Swiss-Prot
Match: CH10C_ARATH (20 kDa chaperonin, chloroplastic OS=Arabidopsis thaliana GN=CPN21 PE=1 SV=2) HSP 1 Score: 302.368 bits (773), Expect = 1.547e-81 Identity = 150/192 (78.12%), Postives = 169/192 (88.02%), Query Frame = -2 Query: 123 IKPLGDRGLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 698 IKPLGDR LVKIK EEKT GGI LPSTAQ+KPQ GEVVAVGEG+T+GK K+DI+V G Q+IYSKYAGTE+EFN HLIL+EDD+VGILET++IKDLKPLNDRVFIKVAEAEE TAGGLLLTE +KEKPSIG VIAVGPG LDEEG PL ++ G+TV+YSKYAGNDFKG DG+NYIALRAS+VMA+LS Sbjct: 62 IKPLGDRVLVKIKEAEEKTLGGILLPSTAQSKPQGGEVVAVGEGRTIGKNKIDITVPTGAQIIYSKYAGTEVEFNDVKHLILKEDDIVGILETEDIKDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVSTGSTVLYSKYAGNDFKGKDGSNYIALRASDVMAILS 253
BLAST of CN181830 vs. ExPASy Swiss-Prot
Match: CH10C_SPIOL (20 kDa chaperonin, chloroplastic OS=Spinacia oleracea GN=CPN21 PE=2 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 9.091e-74 Identity = 131/192 (68.23%), Postives = 160/192 (83.33%), Query Frame = -2 Query: 123 IKPLGDRGLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 698 +KPLGDR L+K K VEEKT GIFLP+ AQ KPQ+GEVVA+G GK VG KL ++VK G +V+YSKY GTE+E +G++HLI++EDD++GILETD++KDLKPLNDR+ IKVAE E T+GGLLL E+SKEKPS G V+A GPG LDEEGNR PL + GNTV+YSKYAGNDFKG DG++Y+ LR S+VMAVLS Sbjct: 64 VKPLGDRVLIKTKIVEEKTTSGIFLPTAAQKKPQSGEVVAIGSGKKVGDKKLPVAVKTGAEVVYSKYTGTEIEVDGSSHLIVKEDDIIGILETDDVKDLKPLNDRLLIKVAEVENKTSGGLLLAESSKEKPSFGTVVATGPGVLDEEGNRIPLPVCSGNTVLYSKYAGNDFKGVDGSDYMVLRVSDVMAVLS 255 HSP 2 Score: 68.9366 bits (167), Expect = 2.879e-11 Identity = 35/102 (34.31%), Postives = 63/102 (61.76%), Query Frame = -2 Query: 126 LETDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 428 + T + +KPL DRV IK EE T G+ L A+++KP G V+A+G G + G++K P+++ G V+YSKY G + + DG++++ ++ +++ +L Sbjct: 56 ITTSKYTSVKPLGDRVLIKTKIVEEKTTSGIFLPTAAQKKPQSGEVVAIGSG--KKVGDKKLPVAVKTGAEVVYSKYTGTEIE-VDGSSHLIVKEDDIIGIL 154
BLAST of CN181830 vs. ExPASy Swiss-Prot
Match: CH10_RHOMR (10 kDa chaperonin OS=Rhodothermus marinus GN=groS PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22 Identity = 47/95 (49.47%), Postives = 71/95 (74.74%), Query Frame = -2 Query: 414 IKPLGDRGLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILETDE 698 IKPL DR ++K + EEKT+ G+++P TA+ KPQ G V+AVG G+ TK+++SVK G +V+Y KYAGTE+ +G +LI+RE D++GI+E ++ Sbjct: 6 IKPLSDRVVIKPEPPEEKTESGLYIPDTAKEKPQRGTVIAVGPGRVENGTKIEMSVKEGDKVLYGKYAGTEITIDGEEYLIMRETDILGIIEEEK 100 HSP 2 Score: 78.1814 bits (191), Expect = 4.745e-14 Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = -2 Query: 126 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 404 +KPL+DRV IK EE T GL + + +KEKP G VIAVGPG + E G + +S+ G+ V+Y KYAG + DG Y+ +R ++++ ++ Sbjct: 6 IKPLSDRVVIKPEPPEEKTESGLYIPDTAKEKPQRGTVIAVGPGRV-ENGTKIEMSVKEGDKVLYGKYAGTEIT-IDGEEYLIMRETDILGII 96
BLAST of CN181830 vs. ExPASy Swiss-Prot
Match: CH10_THEPX (10 kDa chaperonin OS=Thermoanaerobacter sp. (strain X514) GN=groS PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.625e-22 Identity = 49/92 (53.26%), Postives = 69/92 (75.00%), Query Frame = -2 Query: 423 IKPLGDRGLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 698 +KPLGDR +VK+ EE T GG+ LP TA+ KPQ GEVVAVG G+ + K+++ VK G +VI+SKYAGTE++ +G +L+LRE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94 HSP 2 Score: 83.1889 bits (204), Expect = 1.475e-15 Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = -2 Query: 126 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 404 LKPL DRV +KV +AEE T GG++L +KEKP G V+AVG G +G + L + G+ V++SKYAG + K DG Y+ LR S+++A++ Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQY-IDGKKVELEVKVGDRVIFSKYAGTEVK-LDGEEYLLLRESDILAII 93
BLAST of CN181830 vs. ExPASy Swiss-Prot
Match: CH10_THEP3 (10 kDa chaperonin OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=groS PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.625e-22 Identity = 49/92 (53.26%), Postives = 69/92 (75.00%), Query Frame = -2 Query: 423 IKPLGDRGLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 698 +KPLGDR +VK+ EE T GG+ LP TA+ KPQ GEVVAVG G+ + K+++ VK G +VI+SKYAGTE++ +G +L+LRE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94 HSP 2 Score: 83.1889 bits (204), Expect = 1.475e-15 Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = -2 Query: 126 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 404 LKPL DRV +KV +AEE T GG++L +KEKP G V+AVG G +G + L + G+ V++SKYAG + K DG Y+ LR S+++A++ Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQY-IDGKKVELEVKVGDRVIFSKYAGTEVK-LDGEEYLLLRESDILAII 93
BLAST of CN181830 vs. ExPASy Swiss-Prot
Match: CH10_THEBR (10 kDa chaperonin OS=Thermoanaerobacter brockii GN=groS PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.625e-22 Identity = 49/92 (53.26%), Postives = 69/92 (75.00%), Query Frame = -2 Query: 423 IKPLGDRGLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 698 +KPLGDR +VK+ EE T GG+ LP TA+ KPQ GEVVAVG G+ + K+++ VK G +VI+SKYAGTE++ +G +L+LRE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGEYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94 HSP 2 Score: 83.1889 bits (204), Expect = 1.475e-15 Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = -2 Query: 126 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 404 LKPL DRV +KV +AEE T GG++L +KEKP G V+AVG G +G + L + G+ V++SKYAG + K DG Y+ LR S+++A++ Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGEY-IDGKKVELEVKVGDRVIFSKYAGTEVK-LDGEEYLLLRESDILAII 93
BLAST of CN181830 vs. ExPASy Swiss-Prot
Match: CH10_THEVL (10 kDa chaperonin OS=Thermosynechococcus vulcanus GN=groS PE=3 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.799e-21 Identity = 46/96 (47.92%), Postives = 71/96 (73.96%), Query Frame = -2 Query: 126 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 413 + +KPL DR+F+KVAE+EE TAGG+LL + ++EKP +G V AVGPG L E+G R+P+ + G+ V+YSKYAG + K + G +Y+ L +++A++ Sbjct: 8 VSTVKPLGDRIFVKVAESEERTAGGILLPDNAREKPQVGEVTAVGPGKLTEDGKRQPMDVKVGDKVLYSKYAGTEVKLA-GEDYVLLSEKDILAIV 102 HSP 2 Score: 90.8929 bits (224), Expect = 7.074e-18 Identity = 46/92 (50.00%), Postives = 63/92 (68.48%), Query Frame = -2 Query: 426 IKPLGDRGLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 698 +KPLGDR VK+ EE+T GGI LP A+ KPQ GEV AVG GK T + + VK G +V+YSKYAGTE++ G ++++L E D++ I+ Sbjct: 11 VKPLGDRIFVKVAESEERTAGGILLPDNAREKPQVGEVTAVGPGKLTEDGKRQPMDVKVGDKVLYSKYAGTEVKLAGEDYVLLSEKDILAIV 102
BLAST of CN181830 vs. ExPASy Swiss-Prot
Match: CH10_THEEB (10 kDa chaperonin OS=Thermosynechococcus elongatus (strain BP-1) GN=groS PE=3 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.799e-21 Identity = 46/96 (47.92%), Postives = 71/96 (73.96%), Query Frame = -2 Query: 126 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 413 + +KPL DR+F+KVAE+EE TAGG+LL + ++EKP +G V AVGPG L E+G R+P+ + G+ V+YSKYAG + K + G +Y+ L +++A++ Sbjct: 8 VSTVKPLGDRIFVKVAESEERTAGGILLPDNAREKPQVGEVTAVGPGKLTEDGKRQPMDVKVGDKVLYSKYAGTEVKLA-GEDYVLLSEKDILAIV 102 HSP 2 Score: 90.8929 bits (224), Expect = 7.074e-18 Identity = 46/92 (50.00%), Postives = 63/92 (68.48%), Query Frame = -2 Query: 426 IKPLGDRGLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGK-TVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGIL 698 +KPLGDR VK+ EE+T GGI LP A+ KPQ GEV AVG GK T + + VK G +V+YSKYAGTE++ G ++++L E D++ I+ Sbjct: 11 VKPLGDRIFVKVAESEERTAGGILLPDNAREKPQVGEVTAVGPGKLTEDGKRQPMDVKVGDKVLYSKYAGTEVKLAGEDYVLLSEKDILAIV 102
BLAST of CN181830 vs. ExPASy Swiss-Prot
Match: CH10_NATTJ (10 kDa chaperonin OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=groS PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.799e-21 Identity = 49/93 (52.69%), Postives = 70/93 (75.27%), Query Frame = -2 Query: 423 IKPLGDRGLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGK-TKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 698 +KPLGDR ++KI EEKT+ GI LP A+ KPQ GEVVAVG GKT+ +K++ VK G +V+YSK+AG E+E +G +LI+R+DD++ ++E Sbjct: 3 LKPLGDRIVIKILEAEEKTESGIVLPEKAKEKPQEGEVVAVGSGKTLDDGSKVEPEVKAGDKVVYSKFAGNEVEVDGEEYLIMRQDDILAVIE 95 HSP 2 Score: 85.8853 bits (211), Expect = 2.276e-16 Identity = 41/94 (43.62%), Postives = 64/94 (68.09%), Query Frame = -2 Query: 126 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 407 +LKPL DR+ IK+ EAEE T G++L E +KEKP G V+AVG G ++G++ + G+ V+YSK+AGN+ + DG Y+ +R +++AV+ Sbjct: 2 NLKPLGDRIVIKILEAEEKTESGIVLPEKAKEKPQEGEVVAVGSGKTLDDGSKVEPEVKAGDKVVYSKFAGNEVE-VDGEEYLIMRQDDILAVI 94
BLAST of CN181830 vs. ExPASy Swiss-Prot
Match: CH10_THETN (10 kDa chaperonin OS=Thermoanaerobacter tengcongensis GN=groS PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.234e-21 Identity = 48/92 (52.17%), Postives = 68/92 (73.91%), Query Frame = -2 Query: 423 IKPLGDRGLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTKLDISVKPGTQVIYSKYAGTELEFNGANHLILREDDVVGILE 698 +KPLGDR +VK+ EE T GG+ LP TA+ KPQ GEVVAVG G+ + +++ VK G +VI+SKYAGTE++ +G +L+LRE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQSEEVTKGGVILPGTAKEKPQQGEVVAVGPGQYIDGKRVEPEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94 HSP 2 Score: 83.5741 bits (205), Expect = 1.129e-15 Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = -2 Query: 126 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGMVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 404 LKPL DRV +KV ++EE T GG++L +KEKP G V+AVGPG +G R + G+ V++SKYAG + K DG Y+ LR S+++A++ Sbjct: 3 LKPLGDRVVVKVIQSEEVTKGGVILPGTAKEKPQQGEVVAVGPGQY-IDGKRVEPEVKVGDRVIFSKYAGTEVK-LDGEEYLLLRESDILAII 93 The following BLAST results are available for this feature:
BLAST of CN181830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181830 ID=CN181830; Name=CN181830; organism=Citrus sinensis; type=EST; length=699bpback to top |