CN181814
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181814 vs. ExPASy Swiss-Prot
Match: RTNLN_ARATH (Reticulon-like protein B14 OS=Arabidopsis thaliana GN=RTNLB14 PE=2 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 6.978e-34 Identity = 49/112 (43.75%), Postives = 69/112 (61.61%), Query Frame = 2 Query: 101 LGGGTVADILLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMITLFIWS--KAAGLIPMSPPTVDEIRLSDRTCTSLFANVNCLLTKFYDISCGENLKLYILA 430 LGGG ADI+ WKN+ S IL V T+IW LFE++EY FIT LC L + IWS ++ LI PP+++++R+S+ LF +N + K YDIS G++ +L LA Sbjct: 26 LGGGRFADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLIWSYIGSSQLIQSKPPSINDLRISESNWRFLFNKINWFIIKLYDISSGKDFRLLFLA 137 HSP 2 Score: 63.929 bits (154), Expect = 6.978e-34 Identity = 29/57 (50.88%), Postives = 44/57 (77.19%), Query Frame = 1 Query: 418 LYSGFLCLETLPALYLRFQGEVDYLAAKSTQDMRRLFNDFNSKVLDKIPRASAKEKK 588 LY F+ LET+P LY +++ E+ Y A+KS +DM++L N FNSKV++KIP+A AK ++ Sbjct: 157 LYIVFVGLETIPMLYEQYEEELTYAASKSGRDMKKLLNKFNSKVINKIPKAQAKTRR 213
BLAST of CN181814 vs. ExPASy Swiss-Prot
Match: RTNLI_ARATH (Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 7.758e-29 Identity = 46/124 (37.10%), Postives = 72/124 (58.06%), Query Frame = 2 Query: 68 LFGLQGPLLDILGGGTVADILLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMITLFIWSKAAGLIPMSPPTVDEIRLSD----RTCTSLFANVNCLLTKFYDISCGENLKLYIL 427 LF Q + I GGG VADILLW+ ++A +++ V+++W L E++EYNFITL+C+ M+ FIWS A+ + P + E+ L + + S N +LTK D++CG + L+ L Sbjct: 23 LFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFL 146 HSP 2 Score: 52.7582 bits (125), Expect = 7.758e-29 Identity = 22/58 (37.93%), Postives = 38/58 (65.52%), Query Frame = 1 Query: 418 LYSGFLCLETLPALYLRFQGEVDYLAAKSTQDMRRLFNDFNSKVLDKIPRASAKEKKY 591 L+ GF+ ++TLP +Y ++ +VD A K + M++L+ ++ VL KIPR + K KK+ Sbjct: 167 LFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLYKKVDTNVLSKIPRGTVKNKKF 224
BLAST of CN181814 vs. ExPASy Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.589e-22 Identity = 46/124 (37.10%), Postives = 70/124 (56.45%), Query Frame = 2 Query: 68 LFGLQGPLLDILGGGTVADILLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMITLFIWSKAAGLIPMSPPTVDEIRLSD----RTCTSLFANVNCLLTKFYDISCGENLKLYIL 427 LFG + PL + GGG ADI LW+N+ +S +L TV W+LFE+LEYN +TL + + LF+WS A+ I SP + E+ + + + + L +N T DI+ G +LK ++L Sbjct: 48 LFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLL 171 HSP 2 Score: 35.4242 bits (80), Expect = 2.589e-22 Identity = 14/48 (29.17%), Postives = 31/48 (64.58%), Query Frame = 1 Query: 418 LYSGFLCLETLPALYLRFQGEVDYLAAKSTQDMRRLFNDFNSKVLDKI 561 +Y + L T+P LY +++ +VD K+ +++++ + +F+ KVL K+ Sbjct: 192 IYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKV 239
BLAST of CN181814 vs. ExPASy Swiss-Prot
Match: RTNLH_ARATH (Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.257e-21 Identity = 47/125 (37.60%), Postives = 74/125 (59.20%), Query Frame = 2 Query: 68 LFGLQGPLLDILGGGTVADILLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMITLFIWSKAAGLIPMSPPTVDEIRLSD----RTCTSLFANVNCLLTKFYDISCGENLKLYILA 430 LF Q P+ +LGGG AD+LLW+N+ +SA++L+ T IW+LFE + ++F++L+CY L MI F+WS A+G + S V + L ++ VN L D++C NLK +++A Sbjct: 45 LFDRQKPIHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMA 169 HSP 2 Score: 31.9574 bits (71), Expect = 1.257e-21 Identity = 17/57 (29.82%), Postives = 25/57 (43.86%), Query Frame = 1 Query: 418 LYSGFLCLETLPALYLRFQGEVDYLAAKSTQDMRRLFNDFNSKVLDKIPRASAKEKK 588 LY GF+ T+P LY R++ EVD + ++ L +IP KK Sbjct: 189 LYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTGFLSRIPSGKFGLKK 245
BLAST of CN181814 vs. ExPASy Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.906e-20 Identity = 50/161 (31.06%), Postives = 86/161 (53.42%), Query Frame = 2 Query: 68 LFGLQGPLLDILGGGTVADILLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMITLFIWSKAAGLIPMSPPTVDEIRLSD----RTCTSLFANVNCLLTKFYDISCGENLKLYILAFCAWKHYRLCICDFKGRWIILPLKVLKTCGGCLTIS 538 LFG + P+ +LGGG ADI +WKN+ +S +L T W++FE++EY+ +TLLC+ + ++ LF+WS A I SPP + E+ + + + + L +N + +I+ G +LK +++A G W+ L +L C LT++ Sbjct: 73 LFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIA-------------GLWV---LSILGGCFNFLTLA 217
BLAST of CN181814 vs. ExPASy Swiss-Prot
Match: RTNLD_ARATH (Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19 Identity = 52/160 (32.50%), Postives = 84/160 (52.50%), Query Frame = 2 Query: 68 LFGLQGPLLDILGGGTVADILLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMITLFIWSKAAGLIPMSPPTVDEIRLSD----RTCTSLFANVNCLLTKFYDISCGENLKLYILAFCAWKHYRLCICDFKGRWIILPLKVLKTCGGCLTI 535 LFG + P+ +LGGG ADI LW+N+ +S +L VT W+LFE+ EY+ + LC+F F + LF+WS A I S P + E+ + + + + L +N LT +I+ G+++K +IL G W+ L ++ +C LT+ Sbjct: 52 LFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIA-------------GLWV---LSIIGSCYNFLTL 195
BLAST of CN181814 vs. ExPASy Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.693e-19 Identity = 48/143 (33.57%), Postives = 81/143 (56.64%), Query Frame = 2 Query: 68 LFGLQGPLLDILGGGTVADILLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMITLFIWSKAAGLIPMSPPTVDEIRLSDR----TCTSLFANVNCLLTKFYDISCGENLKLYILAFCAWKHYRLCICDFKGRW 484 LFG + P+ +LGGG AD+ LW+++ LSA++L V T IW+LFE++EY+F++L+C+ L F + LF+ S A + +PP + EI + + ++L +N I+ G +LK +++ + L I G W Sbjct: 52 LFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVV-----FGLWIISVVGNW 189
BLAST of CN181814 vs. ExPASy Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18 Identity = 49/161 (30.43%), Postives = 85/161 (52.80%), Query Frame = 2 Query: 68 LFGLQGPLLDILGGGTVADILLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMITLFIWSKAAGLIPMSPPTVDEIRLSD----RTCTSLFANVNCLLTKFYDISCGENLKLYILAFCAWKHYRLCICDFKGRWIILPLKVLKTCGGCLTIS 538 LFG + P+ +LGGG ADI +WK++ +S + TV W+LFE++EY+ +TLLC+ + + LF+WS A I SPP + E+ + + + + L +N ++ +I+ G ++K ++ A G W+ L +L C LT++ Sbjct: 69 LFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIA-------------GLWV---LSILGGCYSFLTLA 213
BLAST of CN181814 vs. ExPASy Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.649e-17 Identity = 48/143 (33.57%), Postives = 77/143 (53.85%), Query Frame = 2 Query: 68 LFGLQGPLLDILGGGTVADILLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMITLFIWSKAAGLIPMSPPTVDEIRLSDR----TCTSLFANVNCLLTKFYDISCGENLKLYILAFCAWKHYRLCICDFKGRW 484 +FG + P+ +LGGG AD+ LW+++ LS A+L V T IW+LFE++EY+ ++LLC+ + LF+WS A LI + P + EI + + +SL +N I+ G +LK +++ L I G W Sbjct: 52 MFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVG-----LWIISVVGNW 189
BLAST of CN181814 vs. ExPASy Swiss-Prot
Match: RTNLL_ARATH (Reticulon-like protein B12 OS=Arabidopsis thaliana GN=RTNLB12 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.863e-15 Identity = 41/122 (33.61%), Postives = 67/122 (54.92%), Query Frame = 2 Query: 68 LFGLQGPLLDILGGGTVADILLWKNRNLSAAILVVVTVIWLLFEILEYNFITLLCYFLCFIMITLFIWSKAAGLIPMSPPTVDEIRLSDRTCTS----LFANVNCLLTKFYDISCGENLKLY 421 LF + +ILGGG VAD++LW+ +N+S I+ V W++FE Y TL+ L ++ LF+WSK+A ++ P + E ++S+ L +VN LL +DI+ + +LY Sbjct: 8 LFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELY 129 The following BLAST results are available for this feature:
BLAST of CN181814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181814 ID=CN181814; Name=CN181814; organism=Citrus sinensis; type=EST; length=718bpback to top |