CN181807

Overview
NameCN181807
Unique NameCN181807
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length647
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2657 contig Csv1_Contig2657:55..694. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181807 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 5.300e-70
Identity = 125/155 (80.65%), Postives = 141/155 (90.97%), Query Frame = -1
Query:  165 KFKRKGEDLFYEHILSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQ-AHAQEAYEEDEDMPGGAQRVQCAQQ 626
            KFKRKG+DLFYEH LSLTEALCGFQF LTHLD RQLLIKSNPGEV+KPD +K IN+EGMP+YQRPFM+GKLYIHF+V+FPDSLTPDQ KALE++LPSR  S +TDME+DECEETT+HDVNIEEEMRRKQ   AQEAY+ED++  GGAQRVQCAQQ
Sbjct:  264 KFKRKGDDLFYEHSLSLTEALCGFQFVLTHLDNRQLLIKSNPGEVIKPDQFKGINDEGMPMYQRPFMRGKLYIHFSVDFPDSLTPDQCKALESVLPSRNASRLTDMEIDECEETTMHDVNIEEEMRRKQHQQAQEAYDEDDEGHGGAQRVQCAQQ 418          
BLAST of CN181807 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 260.766 bits (665), Expect = 4.487e-69
Identity = 126/157 (80.25%), Postives = 139/157 (88.54%), Query Frame = -1
Query:  165 KFKRKGEDLFYEHILSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQAHAQEAY---EEDEDMPGGAQRVQCAQQ 626
            KFKRKGEDLF EH LSLTEALCGFQF LTHLDGR LLIKSNPGEVVKPDSYKAI++EGMP+YQRPFMKGKLYIHFTVEFPDSL+PDQ KALEA+LP    + ++DME+DECEETTLHDVNIE+EMRRK    +EAY   +ED+D PGGAQRVQCAQQ
Sbjct:  264 KFKRKGEDLFVEHTLSLTEALCGFQFVLTHLDGRSLLIKSNPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPDSLSPDQTKALEAVLPKPSTAQLSDMEIDECEETTLHDVNIEDEMRRKAQAQREAYDDDDEDDDHPGGAQRVQCAQQ 420          
BLAST of CN181807 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 2.227e-68
Identity = 126/154 (81.82%), Postives = 137/154 (88.96%), Query Frame = -1
Query:  165 KFKRKGEDLFYEHILSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQAHAQEAYEEDEDMPGGAQRVQCAQQ 626
            KFKRKG+DLF EH LSL E+LCGFQF LTHLDGRQLLIKS PGEVVKPD +KAIN+EGMP+YQRPFMKGKLYIHF+VEFPDSL P+Q KALE +LP R    ++DMELDECEETTLHDVNIEEEMRRKQ  AQEAY+EDEDM GGAQRVQCAQQ
Sbjct:  262 KFKRKGDDLFVEHTLSLVESLCGFQFILTHLDGRQLLIKSLPGEVVKPDQFKAINDEGMPMYQRPFMKGKLYIHFSVEFPDSLNPEQCKALEGVLPPRTSVQLSDMELDECEETTLHDVNIEEEMRRKQ--AQEAYDEDEDMHGGAQRVQCAQQ 413          
BLAST of CN181807 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 8.461e-68
Identity = 121/155 (78.06%), Postives = 138/155 (89.03%), Query Frame = -1
Query:  165 KFKRKGEDLFYEHILSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQ-AHAQEAYEEDEDMPGGAQRVQCAQQ 626
            KF+RKG+DLFY+H LSLTEALCGFQF LTHLDGRQLLIKSNPGEVVKPD +KAIN+EGMP+YQRPFM+GKLYI F V+FPDSLTPDQ K +E++LP    S +TDME+DECEETT+HDVNIEEEMRRKQ  HAQEAY+ED++  GG QRVQCAQQ
Sbjct:  243 KFQRKGDDLFYKHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIQFLVDFPDSLTPDQCKVIESVLPRSASSQLTDMEIDECEETTMHDVNIEEEMRRKQHQHAQEAYDEDDEGHGGGQRVQCAQQ 397          
BLAST of CN181807 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.443e-67
Identity = 126/155 (81.29%), Postives = 137/155 (88.39%), Query Frame = -1
Query:  165 KFKRKGEDLFYEHILSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQAHA-QEAYEEDEDMPGGAQRVQCAQQ 626
            KFKRKGEDLFYEH LSLTEALCGF+F LTHLDGRQLLIKSN GEVVKPD +KAI +EGMP+YQRPFMKGK+YIHFTVEFPDSL PDQVK+LEAILP +P   +T MELDECEETTLH+VNIEEEM+RKQ  A QEAY+ED D P G QRVQCAQQ
Sbjct:  264 KFKRKGEDLFYEHTLSLTEALCGFRFVLTHLDGRQLLIKSNLGEVVKPDQFKAIEDEGMPIYQRPFMKGKMYIHFTVEFPDSLNPDQVKSLEAILPPKPSMSLTYMELDECEETTLHNVNIEEEMKRKQTQAQQEAYDED-DEPAGGQRVQCAQQ 417          
BLAST of CN181807 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 252.677 bits (644), Expect = 1.222e-66
Identity = 120/155 (77.42%), Postives = 138/155 (89.03%), Query Frame = -1
Query:  165 KFKRKGEDLFYEHILSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQAHAQEAYEED-EDMPGGAQRVQCAQQ 626
            KFKRKGEDLF EH +SLTEALCGFQF LTHLD RQLLIKS PGEVVKPDSYKAI++EGMP+YQRPFMKGKLYIHFTVEFP+SL+PDQ KA+EA+LP    + ++DME+D+CEETTLHDVNIE+EM+RK    +EAY++D ED PGGAQRVQCAQQ
Sbjct:  265 KFKRKGEDLFVEHTISLTEALCGFQFVLTHLDKRQLLIKSKPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPESLSPDQTKAIEAVLPKPTKAAISDMEIDDCEETTLHDVNIEDEMKRKAQAQREAYDDDEEDHPGGAQRVQCAQQ 419          
BLAST of CN181807 vs. ExPASy Swiss-Prot
Match: DNJA1_RAT (DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.596e-26
Identity = 67/154 (43.51%), Postives = 95/154 (61.69%), Query Frame = -1
Query:  174 AKFKRKGEDLFYEHILSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDS--LTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQAHAQEAYEEDEDMPGGAQRVQC 629
            A F R+GEDLF    + L EALCGFQ  ++ LD R ++I S+PG++VK    K +  EGMP+Y+RP+ KG+L I F V FP++  L+PD++  LE +LP R     TD E+D+ E      V+ +    R++ +  EAYE+DE  P G   VQC
Sbjct:  249 AVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVEETD-EMDQVEL-----VDFDPNQERRRHYNGEAYEDDEHHPRGG--VQC 394          
BLAST of CN181807 vs. ExPASy Swiss-Prot
Match: DNJA1_PONAB (DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.596e-26
Identity = 67/154 (43.51%), Postives = 95/154 (61.69%), Query Frame = -1
Query:  174 AKFKRKGEDLFYEHILSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDS--LTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQAHAQEAYEEDEDMPGGAQRVQC 629
            A F R+GEDLF    + L EALCGFQ  ++ LD R ++I S+PG++VK    K +  EGMP+Y+RP+ KG+L I F V FP++  L+PD++  LE +LP R     TD E+D+ E      V+ +    R++ +  EAYE+DE  P G   VQC
Sbjct:  248 AVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVEETD-EMDQVEL-----VDFDPNQERRRHYNGEAYEDDEHHPRGG--VQC 393          
BLAST of CN181807 vs. ExPASy Swiss-Prot
Match: DNJA1_MOUSE (DnaJ homolog subfamily A member 1 OS=Mus musculus GN=Dnaja1 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.596e-26
Identity = 67/154 (43.51%), Postives = 95/154 (61.69%), Query Frame = -1
Query:  174 AKFKRKGEDLFYEHILSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDS--LTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQAHAQEAYEEDEDMPGGAQRVQC 629
            A F R+GEDLF    + L EALCGFQ  ++ LD R ++I S+PG++VK    K +  EGMP+Y+RP+ KG+L I F V FP++  L+PD++  LE +LP R     TD E+D+ E      V+ +    R++ +  EAYE+DE  P G   VQC
Sbjct:  249 AVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVEETD-EMDQVEL-----VDFDPNQERRRHYNGEAYEDDEHHPRGG--VQC 394          
BLAST of CN181807 vs. ExPASy Swiss-Prot
Match: DNJA1_HUMAN (DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 3.596e-26
Identity = 67/154 (43.51%), Postives = 95/154 (61.69%), Query Frame = -1
Query:  174 AKFKRKGEDLFYEHILSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDS--LTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQAHAQEAYEEDEDMPGGAQRVQC 629
            A F R+GEDLF    + L EALCGFQ  ++ LD R ++I S+PG++VK    K +  EGMP+Y+RP+ KG+L I F V FP++  L+PD++  LE +LP R     TD E+D+ E      V+ +    R++ +  EAYE+DE  P G   VQC
Sbjct:  249 AVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVEETD-EMDQVEL-----VDFDPNQERRRHYNGEAYEDDEHHPRGG--VQC 394          
The following BLAST results are available for this feature:
BLAST of CN181807 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
DNJH2_ALLPO5.300e-7080.65DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNAJ3_ARATH4.487e-6980.25Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNJH_CUCSA2.227e-6881.82DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNJH1_ALLPO8.461e-6878.06DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNJH_ATRNU1.443e-6781.29DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNAJ2_ARATH1.222e-6677.42Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
DNJA1_RAT3.596e-2643.51DnaJ homolog subfamily A member 1 OS=Rattus norveg... [more]
DNJA1_PONAB3.596e-2643.51DnaJ homolog subfamily A member 1 OS=Pongo abelii ... [more]
DNJA1_MOUSE3.596e-2643.51DnaJ homolog subfamily A member 1 OS=Mus musculus ... [more]
DNJA1_HUMAN3.596e-2643.51DnaJ homolog subfamily A member 1 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001I03_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001I03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181807 ID=CN181807; Name=CN181807; organism=Citrus sinensis; type=EST; length=647bp
AACAAAAAACACTGCAAACATCAAAGCGTCCACAGCTTTGAGCATCAGAC
ACATGTGCTATTCAAATTATCTTTCCTTAGTAAATAGGTACTGAAATTTA
GCTTCATTTTAGTAAGCGTACAACAACTTAAACCACTTTCAATGATTGTT
CTTCGCCATCATCACTGTTGGGCACACTGCACTCTCTGGGCACCACCAGG
CATATCTTCGTCCTCCTCATATGCCTCTTGAGCATGAGCCTGCTTCCTCC
GCATCTCCTCCTCAATGTTGACATCATGCAATGTAGTCTCTTCACATTCA
TCTAGCTCCATGTCAGTCATCCCAGACAATGGCCTCGATGGGAGGATGGC
CTCTAGGGCCTTAACCTGATCTGGGGTCAGAGAATCAGGGAATTCAACTG
TGAAGTGAATGTACAGTTTCCCCTTCATGAACGGCCTCTGGTACAAGGGC
ATACCCTCCTCATTGATAGCCTTGTATGAATCAGGCTTAACAACTTCCCC
AGGATTCGATTTAATCAGAAGTTGCCTCCCATCCAGATGAGTCAGTGCAA
ACTGGAAACCGCATAGGGCCTCAGTTAGCGACAAAATATGCTCATAAAAA
AGATCTTCTCCCTTTCTCTTGAACTTTGCTCATTGATCCATGTTGGA
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