CN181779

Overview
NameCN181779
Unique NameCN181779
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length754
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9664 contig Csv1_Contig9664:762..1515. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181779 vs. ExPASy Swiss-Prot
Match: CATB_MACFA (Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.667e-39
Identity = 71/145 (48.97%), Postives = 103/145 (71.03%), Query Frame = -3
Query:  282 PGCEPAYLTPKCVRKCVKK-NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKEI 713
            P C     TPKC + C    +  ++  KHY  ++Y +++  +DIMAEIYKNGPVE +F+VY DF  YKSGVY+H+TG++MGGHA++++GWG  ++G  YW++AN WN  WG +G+FKI RG + CGIE +VVAG+P +    ++I
Sbjct:  196 PPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGV-ENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIPRTDQYWEKI 339          
BLAST of CN181779 vs. ExPASy Swiss-Prot
Match: CATB_HUMAN (Cathepsin B OS=Homo sapiens GN=CTSB PE=1 SV=3)

HSP 1 Score: 162.925 bits (411), Expect = 1.667e-39
Identity = 71/145 (48.97%), Postives = 103/145 (71.03%), Query Frame = -3
Query:  282 PGCEPAYLTPKCVRKCVKK-NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKEI 713
            P C     TPKC + C    +  ++  KHY  ++Y +++  +DIMAEIYKNGPVE +F+VY DF  YKSGVY+H+TG++MGGHA++++GWG  ++G  YW++AN WN  WG +G+FKI RG + CGIE +VVAG+P +    ++I
Sbjct:  196 PPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGV-ENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIPRTDQYWEKI 339          
BLAST of CN181779 vs. ExPASy Swiss-Prot
Match: CATB_PONAB (Cathepsin B OS=Pongo abelii GN=CTSB PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.177e-39
Identity = 71/145 (48.97%), Postives = 102/145 (70.34%), Query Frame = -3
Query:  282 PGCEPAYLTPKCVRKCVKK-NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKEI 713
            P C     TPKC + C    +  ++  KHY  ++Y +++   DIMAEIYKNGPVE +F+VY DF  YKSGVY+H+TG++MGGHA++++GWG  ++G  YW++AN WN  WG +G+FKI RG + CGIE +VVAG+P +    ++I
Sbjct:  196 PPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSERDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGV-ENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIPRTDQYWEKI 339          
BLAST of CN181779 vs. ExPASy Swiss-Prot
Match: CATB_PIG (Cathepsin B OS=Sus scrofa GN=CTSB PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.844e-39
Identity = 70/136 (51.47%), Postives = 97/136 (71.32%), Query Frame = -3
Query:  309 PGCEPAYLTPKCVRKCVKK-NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 713
            P C     TPKC + C       ++  KH+  S+Y I+ + ++IMAEIYKNGPVE +FTVY DF  YKSGVY+H+TGD+MGGHA++++GWG  ++G  YW++ N WN  WG +G+FKI RG + CGIE ++VAG+P
Sbjct:  196 PPCTGEGDTPKCSKICEPGYTPSYKEDKHFGCSSYSISRNEKEIMAEIYKNGPVEGAFTVYSDFLQYKSGVYQHVTGDLMGGHAIRILGWGV-ENGTPYWLVGNSWNTDWGDNGFFKILRGQDHCGIESEIVAGIP 330          
BLAST of CN181779 vs. ExPASy Swiss-Prot
Match: CATB_RAT (Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 3.714e-39
Identity = 71/139 (51.08%), Postives = 98/139 (70.50%), Query Frame = -3
Query:  300 PGCEPAYLTPKCVRKC-VKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 713
            P C     TPKC + C    +  ++  KHY  ++Y ++   ++IMAEIYKNGPVE +FTV+ DF  YKSGVYKH  GDVMGGHA++++GWG  ++G  YW++AN WN  WG +G+FKI RG N CGIE ++VAG+P ++
Sbjct:  196 PPCTGEGDTPKCNKMCEAGYSTSYKEDKHYGYTSYSVSDSEKEIMAEIYKNGPVEGAFTVFSDFLTYKSGVYKHEAGDVMGGHAIRILGWGI-ENGVPYWLVANSWNVDWGDNGFFKILRGENHCGIESEIVAGIPRTQ 333          
BLAST of CN181779 vs. ExPASy Swiss-Prot
Match: CPR4_CAEEL (Cathepsin B-like cysteine proteinase 4 OS=Caenorhabditis elegans GN=cpr-4 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.407e-38
Identity = 73/141 (51.77%), Postives = 94/141 (66.67%), Query Frame = -3
Query:  309 VPTPGC-EPAYLTPKCVRKCVKKNQ--LWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 722
            V  P C +  Y TP CV KC  KN    +   KH+  +AY +      I AEI  +GPVE +FTVYEDF  YK+GVY H TG  +GGHA++++GWGT D+G  YW++AN WN +WG +GYF+I RG+NECGIE  VV G+P
Sbjct:  194 VTWPSCPDDGYDTPACVNKCTNKNYNVAYTADKHFGSTAYAVGKKVSQIQAEIIAHGPVEAAFTVYEDFYQYKTGVYVHTTGQELGGHAIRILGWGT-DNGTPYWLVANSWNVNWGENGYFRIIRGTNECGIEHAVVGGVP 333          
BLAST of CN181779 vs. ExPASy Swiss-Prot
Match: CATB_MOUSE (Cathepsin B OS=Mus musculus GN=Ctsb PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 5.363e-38
Identity = 68/136 (50.00%), Postives = 96/136 (70.59%), Query Frame = -3
Query:  309 PGCEPAYLTPKCVRKC-VKKNQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 713
            P C     TP+C + C    +  ++  KH+  ++Y +++  ++IMAEIYKNGPVE +FTV+ DF  YKSGVYKH  GD+MGGHA++++GWG  ++G  YW+ AN WN  WG +G+FKI RG N CGIE ++VAG+P
Sbjct:  196 PPCTGEGDTPRCNKSCEAGYSPSYKEDKHFGYTSYSVSNSVKEIMAEIYKNGPVEGAFTVFSDFLTYKSGVYKHEAGDMMGGHAIRILGWGV-ENGVPYWLAANSWNLDWGDNGFFKILRGENHCGIESEIVAGIP 330          
BLAST of CN181779 vs. ExPASy Swiss-Prot
Match: CATB_BOVIN (Cathepsin B OS=Bos taurus GN=CTSB PE=1 SV=5)

HSP 1 Score: 157.532 bits (397), Expect = 7.004e-38
Identity = 66/136 (48.53%), Postives = 98/136 (72.06%), Query Frame = -3
Query:  309 PGCEPAYLTPKCVRKCVKK-NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 713
            P C     TPKC + C    +  ++  KH+  S+Y + ++ ++IMAEIYKNGPVE +F+VY DF  YKSGVY+H++G++MGGHA++++GWG  ++G  YW++ N WN  WG +G+FKI RG + CGIE ++VAG+P
Sbjct:  196 PPCTGEGDTPKCSKTCEPGYSPSYKEDKHFGCSSYSVANNEKEIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHVSGEIMGGHAIRILGWGV-ENGTPYWLVGNSWNTDWGDNGFFKILRGQDHCGIESEIVAGMP 330          
BLAST of CN181779 vs. ExPASy Swiss-Prot
Match: CATB_CHICK (Cathepsin B OS=Gallus gallus GN=CTSB PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.476e-37
Identity = 66/128 (51.56%), Postives = 93/128 (72.66%), Query Frame = -3
Query:  309 TPKCVRKCVKK-NQLWRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 689
            TP+C R C    +  ++  KHY I++Y +    ++IMAEIYKNGPVE +F VYEDF  YKSGVY+H++G+ +GGHA++++GWG  ++G  YW+ AN WN  WG  G+FKI RG + CGIE ++VAG+P
Sbjct:  205 TPRCSRHCEPGYSPSYKEDKHYGITSYGVPRSEKEIMAEIYKNGPVEGAFIVYEDFLMYKSGVYQHVSGEQVGGHAIRILGWGV-ENGTPYWLAANSWNTDWGITGFFKILRGEDHCGIESEIVAGVP 331          
BLAST of CN181779 vs. ExPASy Swiss-Prot
Match: CPR5_CAEEL (Cathepsin B-like cysteine proteinase 5 OS=Caenorhabditis elegans GN=cpr-5 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.929e-37
Identity = 73/142 (51.41%), Postives = 89/142 (62.68%), Query Frame = -3
Query:  309 VPTPGC-EPAYLTPKCVRKCVKKNQL---WRNSKHYSISAYRINSDPEDIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 722
            V  P C E    TPKCV  C  KN     +   KH+  +AY +    E I  EI  NGP+EV+FTVYEDF  Y +GVY H  G  +GGHAVK++GWG  D+G  YW++AN WN +WG  GYF+I RG NECGIE   VAG+P
Sbjct:  198 VKWPACPEDTEPTPKCVDSCTSKNNYATPYLQDKHFGSTAYAVGKKVEQIQTEILTNGPIEVAFTVYEDFYQYTTGVYVHTAGASLGGHAVKILGWGV-DNGTPYWLVANSWNVAWGEKGYFRIIRGLNECGIEHSAVAGIP 338          
The following BLAST results are available for this feature:
BLAST of CN181779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
CATB_MACFA1.667e-3948.97Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV... [more]
CATB_HUMAN1.667e-3948.97Cathepsin B OS=Homo sapiens GN=CTSB PE=1 SV=3[more]
CATB_PONAB2.177e-3948.97Cathepsin B OS=Pongo abelii GN=CTSB PE=2 SV=1[more]
CATB_PIG2.844e-3951.47Cathepsin B OS=Sus scrofa GN=CTSB PE=1 SV=1[more]
CATB_RAT3.714e-3951.08Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2[more]
CPR4_CAEEL2.407e-3851.77Cathepsin B-like cysteine proteinase 4 OS=Caenorha... [more]
CATB_MOUSE5.363e-3850.00Cathepsin B OS=Mus musculus GN=Ctsb PE=1 SV=2[more]
CATB_BOVIN7.004e-3848.53Cathepsin B OS=Bos taurus GN=CTSB PE=1 SV=5[more]
CATB_CHICK3.476e-3751.56Cathepsin B OS=Gallus gallus GN=CTSB PE=2 SV=1[more]
CPR5_CAEEL5.929e-3751.41Cathepsin B-like cysteine proteinase 5 OS=Caenorha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001H12_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181779 ID=CN181779; Name=CN181779; organism=Citrus sinensis; type=EST; length=754bp
CCCTTTTTTAGCAGACGGAGCATGATGTGACATTTTTCATCTAAACGAAT
AATTCGGCGAGGAGAAACGAAGTTATTACAACTGGTTCTATTTTTACACA
CAACATTAAACTCCATTAATACATTCAATTATGCAAGACGGGAGCTTCCC
ATTTCATGCCTTGATAGCTTAGGTTCAACGATACACCCCTATAGCTACAC
ATTTGATATATAAATAACAACATGAAGGTATAGCAAAGTCTGCTCTCAAG
CTGAAGCATCCTCAAACATATCTGCACTTGTAATCTCTTTGACAAGATTT
TTGGATGAAGGCAAACCAGCAACCACATCCTCTTCAATACCACACTCATT
TGATCCTCTTTTAATCTTGAAGTAACCATCCGCACCCCAGCTTCTATTCC
ACTGATTAGCGAGAATCCAGTAATCCTCGCCATCATCACTAGTTCCCCAA
CCAATAAGCTTAACAGCATGACCCCCCATTACATCGCCTGTGATGTGTTT
GTAGACCCCAGATTTGTAGTGAGCAAAATCCTCATAAACTGTGAAGGAAA
CTTCAACTGGTCCATTCTTGTAAATTTCTGCCATTATGTCCTCTGGATCA
GAATTGATTCTATATGCACTAATACTGTAGTGCTTTGAATTCCTCCAAAG
CTGGTTTTTCTTGACGCACTTCCTCACACACTTTGGAGTAAGATATGCCG
GCTCACAACCAGGGGTGGGAACAGCCCAGTACTATCAAAGTAGGGATCAC
ACTC
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