CN181778
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181778 vs. ExPASy Swiss-Prot
Match: EIF3K_ORYSJ (Eukaryotic translation initiation factor 3 subunit K OS=Oryza sativa subsp. japonica GN=TIF3K1 PE=2 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 3.091e-82 Identity = 151/191 (79.06%), Postives = 172/191 (90.05%), Query Frame = 2 Query: 122 SFTVEQLVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFWDEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGWILEGDQSTSQLIVLPPN 694 S+TVE+LVAVNPYNPDIL DLE +VN+QV +QTY+LDANL LLRLYQFEPER+S QIV+RILIKALMAMP PDFSLCLFLIPE VQME+QFKTLIVLSHYLET RFR FWDEA+K+RNI++ VPGFEQAIQS+AIHVLSLTYQK+PR VLAEAIN++GL+LDKFLEH AN GW++E + SQLIVLP N Sbjct: 9 SYTVEELVAVNPYNPDILNDLEGFVNDQVSNQTYNLDANLSLLRLYQFEPERLSVQIVSRILIKALMAMPGPDFSLCLFLIPEHVQMEEQFKTLIVLSHYLETARFRQFWDEASKNRNILDVVPGFEQAIQSYAIHVLSLTYQKVPRPVLAEAINIEGLALDKFLEHHIANSGWVIE-KGARSQLIVLPRN 198
BLAST of CN181778 vs. ExPASy Swiss-Prot
Match: EIF3K_ARATH (Eukaryotic translation initiation factor 3 subunit K OS=Arabidopsis thaliana GN=TIF3K1 PE=2 SV=1) HSP 1 Score: 293.508 bits (750), Expect = 7.126e-79 Identity = 145/191 (75.92%), Postives = 170/191 (89.01%), Query Frame = 2 Query: 122 SFTVEQLVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFWDEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGWILEGDQSTSQLIVLPPN 694 S+TVEQLVA+NP+NP+ILPDLENYVN V SQTYSL+ NLCLLRLYQFEPERM+T IVARIL+KALMAMP PDFSLCLFLIPERVQME+QFK+LIVLSHYLETGRF+ FWDEAAK+R+I+EAVPGFEQAIQ++A H+LSL+YQK+PR+VLAEA+N+ G SLDKF+E Q N GWI+E + + IVLP N Sbjct: 13 SYTVEQLVALNPFNPEILPDLENYVN--VTSQTYSLEVNLCLLRLYQFEPERMNTHIVARILVKALMAMPTPDFSLCLFLIPERVQMEEQFKSLIVLSHYLETGRFQQFWDEAAKNRHILEAVPGFEQAIQAYASHLLSLSYQKVPRSVLAEAVNMDGASLDKFIEQQVTNSGWIVEKEGGS---IVLPQN 198
BLAST of CN181778 vs. ExPASy Swiss-Prot
Match: EIF3K_MOUSE (Eukaryotic translation initiation factor 3 subunit K OS=Mus musculus GN=Eif3k PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.330e-27 Identity = 63/168 (37.50%), Postives = 95/168 (56.55%), Query Frame = 2 Query: 140 LVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFWDEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGW 643 L ++ YNP+ L LE YV Q Y L+ANL +L+LYQF P T + A+IL+KAL +P DF+LC +I + Q E + ++ L LET F+ FW ++ +++E + GFE +++ F HV+ +TYQ I R +LAE + G D L+ + GW Sbjct: 15 LKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALDENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEML---GDLTDNQLKVWMSKYGW 179
BLAST of CN181778 vs. ExPASy Swiss-Prot
Match: EIF3K_BOVIN (Eukaryotic translation initiation factor 3 subunit K OS=Bos taurus GN=EIF3K PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.330e-27 Identity = 63/168 (37.50%), Postives = 95/168 (56.55%), Query Frame = 2 Query: 140 LVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFWDEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGW 643 L ++ YNP+ L LE YV Q Y L+ANL +L+LYQF P T + A+IL+KAL +P DF+LC +I + Q E + ++ L LET F+ FW ++ +++E + GFE +++ F HV+ +TYQ I R +LAE + G D L+ + GW Sbjct: 15 LKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALDENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEML---GDLTDSQLKVWMSKYGW 179
BLAST of CN181778 vs. ExPASy Swiss-Prot
Match: EIF3K_HUMAN (Eukaryotic translation initiation factor 3 subunit K OS=Homo sapiens GN=EIF3K PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.267e-27 Identity = 63/168 (37.50%), Postives = 95/168 (56.55%), Query Frame = 2 Query: 140 LVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFWDEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGW 643 L ++ YNP+ L LE YV Q Y L+ANL +L+LYQF P T + A+IL+KAL +P DF+LC +I + Q E + ++ L LET F+ FW ++ +++E + GFE +++ F HV+ +TYQ I R +LAE + G D L+ + GW Sbjct: 15 LKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALDENMDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEML---GDLSDSQLKVWMSKYGW 179
BLAST of CN181778 vs. ExPASy Swiss-Prot
Match: EIF3K_NEMVE (Eukaryotic translation initiation factor 3 subunit K OS=Nematostella vectensis GN=v1g170558 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.080e-26 Identity = 65/179 (36.31%), Postives = 107/179 (59.78%), Query Frame = 2 Query: 128 TVEQLV-AVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFWDEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAI-NLKGLSLDKFLEHQKANCGWILEGD 658 TV QL+ ++ YNP+ L LE+YV+ QV Y LDANL +L+LYQF P T ++++IL+KALM +P DF +C +I + +Q + K +I+L+ LET F W + ++V+ V GF AI+++ +V+ +TYQ I ++ +E + L+G L +++ + GW+ D Sbjct: 8 TVSQLLKGIDRYNPENLKVLEHYVHLQVHENAYDLDANLAVLKLYQFNPAYSQTSVISQILLKALMNLPNADFIMCRCVIDDAIQQDLTIKKVILLAERLETCAFTSAWQFIKEEASLVDGVTGFHDAIRNYITYVIGVTYQTIEESLASELLGGLQGAQLQDWIKAK----GWMSSDD 182
BLAST of CN181778 vs. ExPASy Swiss-Prot
Match: EIF3K_XENTR (Eukaryotic translation initiation factor 3 subunit K OS=Xenopus tropicalis GN=eif3k PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26 Identity = 57/148 (38.51%), Postives = 88/148 (59.46%), Query Frame = 2 Query: 140 LVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFWDEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAI 583 L ++ YNP+ L LE YV Q Y L+ANL +L+LYQF P T + A+IL+KAL +P DF+LC +I + Q E + ++ L LET F+ FW ++ ++++ + GFE +++ F HV+ +TYQ I R +LAE + Sbjct: 15 LRGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTTVTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQSFWQALDENLDLIDGITGFEDSVRKFICHVVGITYQHIDRWLLAEML 162
BLAST of CN181778 vs. ExPASy Swiss-Prot
Match: EIF3K_DANRE (Eukaryotic translation initiation factor 3 subunit K OS=Danio rerio GN=eif3k PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26 Identity = 61/168 (36.31%), Postives = 97/168 (57.74%), Query Frame = 2 Query: 140 LVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFWDEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGW 643 L ++ YNP+ L LE YV+ Q Y L+ANL +L+LYQF T + A+IL+KAL +P DF+LC +I + Q E + ++ L + LET F+ FW ++R++++ + GFE++++ F HV+ +TYQ I +LAE + G LD ++ GW Sbjct: 16 LRGIDRYNPENLATLERYVDTQARENAYDLEANLAVLKLYQFNLAYFQTTVTAQILLKALTNLPHTDFTLCKCMIDQTHQEERPIRQILYLGNLLETCHFQSFWASLEENRDLIDGITGFEESVRKFICHVVGITYQNIEYRLLAEML---GDPLDTQVKVWMNKYGW 180
BLAST of CN181778 vs. ExPASy Swiss-Prot
Match: EIF3K_XENLA (Eukaryotic translation initiation factor 3 subunit K OS=Xenopus laevis GN=eif3k PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.359e-26 Identity = 56/148 (37.84%), Postives = 88/148 (59.46%), Query Frame = 2 Query: 140 LVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFWDEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAI 583 L ++ YNP+ L LE YV Q Y L+ANL +L+LYQF P T + A++L+KAL +P DF+LC +I + Q + + ++ L LET F+ FW ++ ++++ V GFE +++ F HV+ +TYQ I R +LAE + Sbjct: 15 LRGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTTVTAQVLLKALTNLPHTDFTLCKCMIDQAHQEDRPIRQILYLGDLLETCHFQSFWQALDENLDLIDGVTGFEDSVRKFICHVVGITYQHIDRWLLAEML 162
BLAST of CN181778 vs. ExPASy Swiss-Prot
Match: EIF3K_DROER (Eukaryotic translation initiation factor 3 subunit K OS=Drosophila erecta GN=GG22131 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.320e-24 Identity = 64/174 (36.78%), Postives = 94/174 (54.02%), Query Frame = 2 Query: 134 EQLVAVNPYNPDILPDLENYVNEQVLSQTYSLDANLCLLRLYQFEPERMSTQIVARILIKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRHFWDEAAKHRNIVEAVPGFEQAIQSFAIHVLSLTYQKIPRTVLAEAINLKGLSLDKFLEHQKANCGWILEG 655 E L + YNPD L LE YV +Q + TY L+ANL +L+LYQF P ++ I IL+K+L ++P DF + L+ + ++ +T+I L+ LE F FW A +RN+ + GF +I+ F HV+S T+Q I + +L E L G D LE GW +G Sbjct: 17 EMLGCIERYNPDHLKTLEAYVQDQAKNNTYDLEANLAVLKLYQFNPHMLNIDITYTILLKSLTSLPHTDFVMAKCLLLPQQMKDENVQTIIDLADILERADFTLFWQRAEVNRNMFRHIAGFHDSIRKFVSHVVSTTFQTIRKDLLKE---LLGGIEDSTLESWIKRNGWKHQG 187 The following BLAST results are available for this feature:
BLAST of CN181778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181778 ID=CN181778; Name=CN181778; organism=Citrus sinensis; type=EST; length=694bpback to top |