CN181772

Overview
NameCN181772
Unique NameCN181772
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length631
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4313 contig Csv1_Contig4313:167..796. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181772 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 5.627e-37
Identity = 76/162 (46.91%), Postives = 105/162 (64.81%), Query Frame = -1
Query:  140 LVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 625
            +VDVGG  G  + MI+ K+P I +GINFDLP V+ +APS PGV  +GGDMF S+P ADAIFMKW+   W+DD C  +++NCY+ALPA GK+I  E +LP+  + S  T++ + GDI +M  +   GK RTE++F+ L     F   R     Y   ++EF K
Sbjct:  200 IVDVGGGTGATVNMIVSKYPSI-KGINFDLPHVIRDAPSYPGVEQVGGDMFVSVPKADAIFMKWICHDWSDDHCIKLLKNCYEALPANGKVIIVECILPEAPDTSAATKSKVHGDI-IMLAHNPGGKERTEKDFEALANWGWFSRFRKVCCAYHTWVMEFNK 359          
BLAST of CN181772 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.647e-36
Identity = 75/149 (50.34%), Postives = 100/149 (67.11%), Query Frame = -1
Query:  185 KRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLR 631
            K +VDVGG  G  L MI+ K+P I +GINF+LP VV +APS  GV H+GGDMF S+P  DAIFMKW+   W+DD C+ +++NCY+ALP  GK+I  E VLP+  + S  T+ ++  D+ VM  +   GK RTE+EF+ L   AGF   R
Sbjct:  189 KTVVDVGGGTGATLNMIISKYPTI-KGINFELPHVVEDAPSHSGVEHVGGDMFVSVPKGDAIFMKWICHDWSDDHCRKLLKNCYQALPDNGKVILAECVLPEAPDTSLATQNVVHVDV-VMLAHNPGGKERTEKEFEALAKGAGFKEFR 335          
BLAST of CN181772 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 4.764e-36
Identity = 74/162 (45.68%), Postives = 101/162 (62.35%), Query Frame = -1
Query:  140 LVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 625
            LVDVGG  G  L  I  +HP I  G+NFDLP V++EAP  PGV H+GGDMF S+PA DAI MKW+L  W+D  C  +++NCY ALP  GK+I  E VLP ++  + + + +   D+ +M  +   GK R E+EF++L   AGF   +A Y+      +EF K
Sbjct:  205 LVDVGGGVGATLHAITSRHPHI-SGVNFDLPHVISEAPPFPGVRHVGGDMFASVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDM-IMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK 364          
BLAST of CN181772 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 8.126e-36
Identity = 74/164 (45.12%), Postives = 104/164 (63.41%), Query Frame = -1
Query:  140 KRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 631
            K LVDVGG  G  +  I+ K+P I +GINFDLP V+ +APS PGV H+GGDMF SIP ADA+FMKW+   W+D+ C   ++NCY+ALP  GK+I  E +LP   + S  T+ ++  D+ +M  +   GK RT++EF+ L   AGF   +     +   ++EF K
Sbjct:  202 KSLVDVGGGTGAVINTIVSKYPTI-KGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDV-IMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363          
BLAST of CN181772 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.061e-35
Identity = 75/162 (46.30%), Postives = 103/162 (63.58%), Query Frame = -1
Query:  140 LVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 625
            +VDVGG  G  + MI+ K+P I +GINFDL  V+ +AP+ PGV H+G DMF S+P ADAIFMKW+   W+D+ C   ++NCY+ALPA GK++  E +LP+  + S  T+  +  DI VM  +   GK RTE+EF+ L   AGF   R     Y   ++EF K
Sbjct:  200 IVDVGGGTGATVNMIVSKYPSI-KGINFDLSHVIEDAPAYPGVEHVGRDMFVSVPKADAIFMKWICHDWSDEHCLKFLKNCYEALPANGKVLVAECILPETPDTSAATKNAVHVDI-VMLAHNPGGKERTEKEFEALAKGAGFTGFRRACCAYQTWVMEFHK 359          
BLAST of CN181772 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.386e-35
Identity = 75/164 (45.73%), Postives = 102/164 (62.20%), Query Frame = -1
Query:  140 KRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 631
            K +VDVGG  G  L MI+ K+P I +GINFDLP V+ +APS PGV H+GGDMF S+P  DAIFMKW+   W+D+ C   ++NCY ALP  GK+I  E VLP+  +    T+ ++  D+ +M  +   GK RTE+EF+ L  +AGF         Y   ++E  K
Sbjct:  200 KTVVDVGGGTGATLNMIVSKYPSI-KGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYDALPQNGKVILAECVLPEAPDTGLATKNVVHIDV-IMLAHNPGGKERTEKEFQGLAKAAGFKQFNKACCAYNTWIMELLK 361          
BLAST of CN181772 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.364e-35
Identity = 73/162 (45.06%), Postives = 102/162 (62.96%), Query Frame = -1
Query:  140 LVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 625
            LVDVGG  G  L MIL K+P I   INFDLP V+ +AP  PG+ H+GGDMF S+P  DAIFMKW+   W+D+ C  +++NCY ALP  GK+I  E +LP+  + S  T+ ++  D+ +   +   GK RTE+EF+ L  +AGF   + F   +   ++EF K
Sbjct:  180 LVDVGGGTGATLTMILSKYPTI-RCINFDLPHVIEDAPEYPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDV-ITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of CN181772 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.364e-35
Identity = 73/162 (45.06%), Postives = 102/162 (62.96%), Query Frame = -1
Query:  140 LVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 625
            LVDVGG  G  L MIL K+P I   INFDLP V+ +AP  PG+ H+GGDMF S+P  DAIFMKW+   W+D+ C  +++NCY ALP  GK+I  E +LP+  + S  T+ ++  D+ +   +   GK RTE+EF+ L  +AGF   + F   +   ++EF K
Sbjct:  180 LVDVGGGTGATLTMILSKYPTI-RCINFDLPHVIEDAPEYPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDV-ITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of CN181772 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 6.879e-35
Identity = 71/162 (43.83%), Postives = 105/162 (64.81%), Query Frame = -1
Query:  140 LVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 625
            LVDVGG  G  L+MI+ K+P + +GINFDLP V+ +APS PG+ H+GGDMF S+P  DAIFMKW+   W+D+ C   ++NCY++LP  GK+I  E +LP+  + S  T+ ++  D  +M  +   GK RTE+EF+ L  ++GF  ++     +   L+E  K
Sbjct:  202 LVDVGGGIGATLKMIVSKYPNL-KGINFDLPHVIEDAPSHPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYESLPEDGKVILAECILPETPDSSLSTKQVVHVDC-IMLAHNPGGKERTEKEFEALAKASGFKGIKVVCDAFGVNLIELLK 361          
BLAST of CN181772 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 6.879e-35
Identity = 75/162 (46.30%), Postives = 99/162 (61.11%), Query Frame = -1
Query:  140 LVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 625
            LVDVGG  G  L  I   HP I +GINFDLP V++EAP  PGV H+GGDMFKS+PA DAI MKW+L  W+D  C  +++NCY ALP  GK+I  E VLP ++    + + +   D+ +M  +   G+ R E+EF  L   AGF   +A Y+      +EF K
Sbjct:  203 LVDVGGGIGATLHAITSHHPQI-KGINFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIIVECVLPVNTEAVPKAQGVFHVDM-IMLAHNPGGRERYEREFHDLAKGAGFSGFKATYIYANAWAIEFIK 362          
The following BLAST results are available for this feature:
BLAST of CN181772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
COMT1_CAPCH5.627e-3746.91Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT1_COFCA3.647e-3650.34Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_MAIZE4.764e-3645.68Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
COMT1_MEDSA8.126e-3645.12Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_CAPAN1.061e-3546.30Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_OCIBA1.386e-3545.73Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
OMT2_CHRAE2.364e-3545.06Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_CHRAE2.364e-3545.06Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
OMT1_ARATH6.879e-3543.83Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_SACOF6.879e-3546.30Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001H08_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181772 ID=CN181772; Name=CN181772; organism=Citrus sinensis; type=EST; length=631bp
GCTTTTTTTTTTTTGGTAGGCAGCTAGCGCTAACCGCCTACTCAACATTT
ATAATTCATAGCAAGTTATTCCATCCTAGGCAACCACAGTCCATCACAAA
TATTCCCCAAGTCTTTTAAGGATCCAGAAACTAAAATTACTTTTGGAACT
CAAGAAGAGTGTGAAAATAATCGACATAAAAAGCTCTCAAGTGTGGAAAA
CCAGCAGAGAGACCAAGTTGCTTAAACTCTTGTTCAGTCCTGTGTTTACC
TTTGGCCCTGTAGATGGTCATTACAAAAATGTCCCCTTCTAAGAGAGCAC
GCGTCCTCTGACTCTCGTTTGAATCATCAGGCAGCACGGGCTCACAAGCA
ATCAGTTTTCCTCCTGCCGGAAGAGCCTTGTAACAGTTCTCCATTATCAG
CTTGCATTCATCGTCAGTCCATGTAGTTAAAACCCACTTCATAAAGATAG
CATCAGCGGCAGGAATGGACTTAAACATGTCCCCACCAATATGGGTCACT
CCAGGGATACTTGGAGCTTCGGCAACAACCTCAGGCAAATCAAAATTGAT
CCCTTCACATATAAAAGGATGTTTCTGTAAAATCATCCTCAAGCAATCAC
CTGCACTCCCACCCACATCAACCAATCGCTT
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