CN181764

Overview
NameCN181764
Unique NameCN181764
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length597
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11791 contig Csv1_Contig11791:10..606. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 300.827 bits (769), Expect = 3.318e-81
Identity = 144/205 (70.24%), Postives = 158/205 (77.07%), Query Frame = 2
Query:    8 KMALWVILCVGFLSLVSSVQGY-GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595
            KM L  I    F ++V SV GY  GW+NAHATFY              YGNLYSQGYGTNTAALSTALFNNGLSCGACF+I C +D  WCL G+IIVTATNFCPP        GGWC+PP HHFDLSQPVFQ IAQY+AG+VPV YRRV C R GGIRFTI+GHSYFNLVL+TNVGGAGDV +V++KGSRTRWQ MSRNWGQNWQ
Sbjct:    5 KMGLLGIALFCFAAMVCSVHGYDAGWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMSRNWGQNWQ 209          
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 4.792e-80
Identity = 145/206 (70.39%), Postives = 156/206 (75.73%), Query Frame = 2
Query:   11 MALWVILCVGFL-SLVSSVQGY--GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595
            MAL   L +  L ++ S V GY  GGW+NAHATFY              YGNLYSQGYGTNTAALSTALFNNGLSCGACF+I C ND +WCL GSI+VTATNFCPP        GGWC+PP  HFDLSQPVFQ IAQYRAGIVPV YRRV C R GGIRFTI+GHSYFNLVLITNVGGAGDV +  +KGSRT WQ MSRNWGQNWQ
Sbjct:    1 MALVTFLFIATLGAMTSHVNGYAGGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQNWQ 206          
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 1.821e-79
Identity = 142/200 (71.00%), Postives = 158/200 (79.00%), Query Frame = 2
Query:   23 VILCVGFLSLVSSVQGYGG-WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595
            V++ VG ++  SSV GYGG WINAHATFY              YGNLYSQGYGT+TAALSTALFNNGLSCG+CF+I C ND +WCL GSI+VTATNFCPP        GGWC+PP  HFDL+QPVFQ IAQYRAGIVPV YRRV C+R GGIRFTI+GHSYFNLVLITNVGGAGDV + ++KGSRT WQ MSRNWGQNWQ
Sbjct:    8 VMIMVGVMA--SSVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMSRNWGQNWQ 205          
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 3.106e-79
Identity = 131/175 (74.86%), Postives = 150/175 (85.71%), Query Frame = 2
Query:   74 GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG-SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595
            G WINAHATFY              YGNLYSQGYG  TAALSTALF+ GLSCGACF++MC NDPQWC++G SI+VTATNFCPPGG CDPPNHHFDLSQP+++ IA Y++GI+PV+YRRVRCKR+GGIRFTI+GHSYFNLVL+TNVGGAGDV +VS+KGSRT+WQ MSRNWGQNWQ
Sbjct:   36 GPWINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGRSIVVTATNFCPPGGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLMSRNWGQNWQ 210          
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 2.083e-75
Identity = 131/200 (65.50%), Postives = 150/200 (75.00%), Query Frame = 2
Query:   23 VILCVGFLSLVSSVQGYG-GWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595
            + L +  + +  SV GY  GW+NA ATFY              YGNLYSQGYGTNTAALSTALFN G SCGACFQI C +DP+WC+ G+I VT TNFCPP        GGWC+PP HHFDL+QP+F  IAQY+AG+VPV YRRV C+R GGIRFTI+GHSYFNLVLITNV GAGDV +VS+KG+ TRWQ MSRNWGQNWQ
Sbjct:    9 ISLSLMMMIMWKSVDGYSSGWVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQ 208          
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 3.929e-74
Identity = 129/203 (63.55%), Postives = 153/203 (75.37%), Query Frame = 2
Query:   11 MALWVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595
            MA+  +L + FL+  +S  GYGGW +AHATFY              YGNLYSQGYGTNTAALSTALFN+G +CG+C+++ C N    CL GSI VTATNFCPP        GGWC+PP  HFD+++P F HIAQYRAGIVPV +RRV C + GG+RFT++GHSYFNLVL+TNV GAGDVR+VS+KGSRT WQPMSRNWGQNWQ
Sbjct:    1 MAIAGVLFLLFLARQASAAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQ 203          
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 3.929e-74
Identity = 129/203 (63.55%), Postives = 153/203 (75.37%), Query Frame = 2
Query:   11 MALWVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595
            MA+  +L + FL+  +S  GYGGW +AHATFY              YGNLYSQGYGTNTAALSTALFN+G +CG+C+++ C N    CL GSI VTATNFCPP        GGWC+PP  HFD+++P F HIAQYRAGIVPV +RRV C + GG+RFT++GHSYFNLVL+TNV GAGDVR+VS+KGSRT WQPMSRNWGQNWQ
Sbjct:    1 MAIAGVLFLLFLARQASAAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQ 203          
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 4.803e-72
Identity = 126/191 (65.97%), Postives = 141/191 (73.82%), Query Frame = 2
Query:   53 VSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595
            +  +   G W NAHATFY              YGNLYSQGYGTNTAALSTALFNNG+SCGACF++ CANDPQWC  GS  I++TATNFCPP        GGWC+PP  HFDL+ PVF  IAQYRAGIVPV YRRV C++ GGIRFTI+GH YFNLVLITNV GAGD+   S+KGSRT W  +SRNWGQNWQ
Sbjct:   22 IPGIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQ 212          
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 1.545e-70
Identity = 126/200 (63.00%), Postives = 146/200 (73.00%), Query Frame = 2
Query:   23 VILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTR-WQPMSRNWGQNWQ 595
            +I  +  L L  +    GGW   HATFY              YGNLY QGYGTNTAALSTALFNNGL+CGAC+++ C +DP+WCL  +I VTATNFCPP        GGWC+PP  HFDL++P F  IAQYRAGIVPV +RRV C + GGIRFTI+GHSYFNLVLI+NVGGAGDV AVS+KGS+T+ WQ MSRNWGQNWQ
Sbjct:   11 IISIISVLFLQGTHGDDGGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNWGQNWQ 210          
BLAST of CN181764 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.308e-69
Identity = 124/205 (60.49%), Postives = 146/205 (71.22%), Query Frame = 2
Query:   11 MALWVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG--SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTIDGHSYFNLVLITNVGGAGDVRAVSLKGSRTRWQPMSRNWGQNWQ 595
            MA+ V+      + +  V   G WINAHATFY              YGNLYSQGYG NTAALSTALFNNGLSCG+CF++ C NDP WCL G  SI++TATNFCPP        GGWC+PP  HFDL+ P+F  IA+Y+AGIVPV YRR+ C++ GGIRFTI+G  YFNLVL+TNV GAGDV  VS+KGS T+W  +SRNWGQNWQ
Sbjct:    9 MAVMVVTAFTANAKIPGVYTGGPWINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQ 213          
The following BLAST results are available for this feature:
BLAST of CN181764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
EXP15_ARATH3.318e-8170.24Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=... [more]
EXPA1_ARATH4.792e-8070.39Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 ... [more]
EXP10_ARATH1.821e-7971.00Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=... [more]
EXPA5_ARATH3.106e-7974.86Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 ... [more]
EXP14_ARATH2.083e-7565.50Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=... [more]
EXPA4_ORYSJ3.929e-7463.55Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA4_ORYSI3.929e-7463.55Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4... [more]
EXPA4_ARATH4.803e-7265.97Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 ... [more]
EXPA8_ARATH1.545e-7063.00Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 ... [more]
EXPA9_ARATH1.308e-6960.49Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001H04_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181764 ID=CN181764; Name=CN181764; organism=Citrus sinensis; type=EST; length=597bp
GAGGAAAAAAATGGCTCTTTGGGTGATTCTTTGTGTTGGGTTTCTCTCAT
TGGTCTCATCCGTTCAAGGTTATGGAGGTTGGATTAATGCTCATGCAACT
TTCTATGGAGGTGGTGATGCTTCTGGCACAATGGGGGGCGCTTGTGGGTA
CGGCAATTTGTACAGCCAAGGTTATGGTACTAATACCGCAGCACTTAGCA
CTGCTTTGTTCAACAATGGCCTAAGTTGTGGAGCTTGCTTTCAAATTATG
TGCGCTAATGACCCGCAATGGTGCCTGCGTGGCTCCATCATTGTCACTGC
CACTAACTTTTGCCCTCCTGGAGGCTGGTGTGATCCTCCTAACCACCACT
TTGATCTCTCTCAGCCTGTCTTCCAACACATTGCCCAGTATAGAGCTGGT
ATTGTTCCTGTAATCTACAGAAGGGTGAGATGCAAGAGAAATGGGGGCAT
AAGGTTCACAATCGATGGCCATTCTTACTTCAATTTAGTTCTAATAACAA
ACGTGGGTGGAGCTGGTGACGTGCGTGCTGTATCCCTCAAAGGTTCAAGG
ACTAGATGGCAACCGATGTCCAGAAACTGGGGCCAAAACTGGCAAAG
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