CN181761

Overview
NameCN181761
Unique NameCN181761
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length643
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1001 contig Csv1_Contig1001:916..1557. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181761 vs. ExPASy Swiss-Prot
Match: EF2_BETVU (Elongation factor 2 OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 9.252e-46
Identity = 67/79 (84.81%), Postives = 73/79 (92.41%), Query Frame = -3
Query:  324 PFYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 560
            P YNIKAYLPV+ESFGFS TLRA+TSGQAFPQCVFDHW+MM SDPLE G+QA+ LV+ IRKRKGLKEQMTPLSEFEDKL
Sbjct:  765 PLYNIKAYLPVVESFGFSSTLRASTSGQAFPQCVFDHWEMMPSDPLEAGSQASTLVSVIRKRKGLKEQMTPLSEFEDKL 843          

HSP 2 Score: 61.2326 bits (147), Expect = 9.252e-46
Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = -2
Query:  556 EQALGGIYSVLNQKRGHVFEEMQRPGTPL 642
            E ALGGIYSVLNQKRGHVFEEMQRPGTPL
Sbjct:  738 ENALGGIYSVLNQKRGHVFEEMQRPGTPL 766          
BLAST of CN181761 vs. ExPASy Swiss-Prot
Match: EF2_CHLKE (Elongation factor 2 OS=Chlorella kessleri PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.614e-38
Identity = 57/79 (72.15%), Postives = 66/79 (83.54%), Query Frame = -3
Query:  324 PFYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 560
            P +N+KAYLPVIESFGF+ TLRAAT+GQAFPQCVFDHW+ M SDP + G+QA  LV DIRKRKGLK +   LSE+EDKL
Sbjct:  767 PIFNLKAYLPVIESFGFTSTLRAATAGQAFPQCVFDHWEAMGSDPTQVGSQANTLVMDIRKRKGLKPEPAALSEYEDKL 845          

HSP 2 Score: 56.225 bits (134), Expect = 1.614e-38
Identity = 24/29 (82.76%), Postives = 28/29 (96.55%), Query Frame = -2
Query:  556 EQALGGIYSVLNQKRGHVFEEMQRPGTPL 642
            EQA+GG+YSVLNQKRG VFEE+QRPGTP+
Sbjct:  740 EQAMGGVYSVLNQKRGMVFEELQRPGTPI 768          
BLAST of CN181761 vs. ExPASy Swiss-Prot
Match: EF2_SCHPO (Elongation factor 2 OS=Schizosaccharomyces pombe GN=eft1 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 8.863e-33
Identity = 50/79 (63.29%), Postives = 61/79 (77.22%), Query Frame = -3
Query:  324 PFYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 560
            P YNIKAYLPV ESFGF+G LR AT+GQAFPQ VFDHW  MS DPL+P ++  Q+V + RKRKGLKE +   +E+ D+L
Sbjct:  764 PLYNIKAYLPVNESFGFTGELRQATAGQAFPQLVFDHWSPMSGDPLDPTSKPGQIVCEARKRKGLKENVPDYTEYYDRL 842          

HSP 2 Score: 50.8322 bits (120), Expect = 8.863e-33
Identity = 23/29 (79.31%), Postives = 25/29 (86.21%), Query Frame = -2
Query:  556 EQALGGIYSVLNQKRGHVFEEMQRPGTPL 642
            E A+GGIYSVLN+KRGHVF E QR GTPL
Sbjct:  737 ENAMGGIYSVLNKKRGHVFSEEQRVGTPL 765          
BLAST of CN181761 vs. ExPASy Swiss-Prot
Match: EF2_ASHGO (Elongation factor 2 OS=Ashbya gossypii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.268e-30
Identity = 46/79 (58.23%), Postives = 58/79 (73.42%), Query Frame = -3
Query:  324 PFYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 560
            P + +KAYLPV ESFGF+G LR AT GQAFPQ VFDHW  + +DPL+P T+A ++V + RKR GLKE +    E+ DKL
Sbjct:  764 PLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWATLGTDPLDPTTKAGEIVVEARKRHGLKENVPGWQEYYDKL 842          

HSP 2 Score: 50.0618 bits (118), Expect = 2.268e-30
Identity = 23/29 (79.31%), Postives = 25/29 (86.21%), Query Frame = -2
Query:  556 EQALGGIYSVLNQKRGHVFEEMQRPGTPL 642
            EQA+GGIYSVLN+KRG V  E QRPGTPL
Sbjct:  737 EQAVGGIYSVLNRKRGQVVSEEQRPGTPL 765          
BLAST of CN181761 vs. ExPASy Swiss-Prot
Match: EF2_KLULA (Elongation factor 2 OS=Kluyveromyces lactis GN=EFT1 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.954e-30
Identity = 44/79 (55.70%), Postives = 59/79 (74.68%), Query Frame = -3
Query:  324 PFYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 560
            P + +KAYLP+ ESFGF+G LR AT GQAFPQ VFDHW  + +DPL+P T+A ++V   RKR+G+KE++    E+ DKL
Sbjct:  764 PLFTVKAYLPINESFGFTGELRQATGGQAFPQMVFDHWATLGTDPLDPSTKAGEIVLAARKRQGMKEEVPGWQEYYDKL 842          

HSP 2 Score: 50.447 bits (119), Expect = 2.954e-30
Identity = 23/29 (79.31%), Postives = 25/29 (86.21%), Query Frame = -2
Query:  556 EQALGGIYSVLNQKRGHVFEEMQRPGTPL 642
            EQA+GGIYSVLN+KRG V  E QRPGTPL
Sbjct:  737 EQAIGGIYSVLNKKRGQVVSEEQRPGTPL 765          
BLAST of CN181761 vs. ExPASy Swiss-Prot
Match: EF2_YEAST (Elongation factor 2 OS=Saccharomyces cerevisiae GN=EFT1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.520e-30
Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = -3
Query:  324 PFYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 560
            P + +KAYLPV ESFGF+G LR AT GQAFPQ VFDHW  + SDPL+P ++A ++V   RKR G+KE++    E+ DKL
Sbjct:  764 PLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWSTLGSDPLDPTSKAGEIVLAARKRHGMKEEVPGWQEYYDKL 842          

HSP 2 Score: 50.0618 bits (118), Expect = 6.520e-30
Identity = 23/29 (79.31%), Postives = 25/29 (86.21%), Query Frame = -2
Query:  556 EQALGGIYSVLNQKRGHVFEEMQRPGTPL 642
            EQA+GGIYSVLN+KRG V  E QRPGTPL
Sbjct:  737 EQAVGGIYSVLNKKRGQVVSEEQRPGTPL 765          
BLAST of CN181761 vs. ExPASy Swiss-Prot
Match: EF2_SACKL (Elongation factor 2 OS=Saccharomyces kluyveri GN=EFT2 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.520e-30
Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = -3
Query:  324 PFYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 560
            P + +KAYLPV ESFGF+G LR AT GQAFPQ VFDHW  + +DPL+P T+A ++V   RKR G+KE++    E+ DKL
Sbjct:  764 PLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWATLGTDPLDPTTKAGEIVTAARKRHGMKEEVPGWQEYYDKL 842          

HSP 2 Score: 50.0618 bits (118), Expect = 6.520e-30
Identity = 23/29 (79.31%), Postives = 25/29 (86.21%), Query Frame = -2
Query:  556 EQALGGIYSVLNQKRGHVFEEMQRPGTPL 642
            EQA+GGIYSVLN+KRG V  E QRPGTPL
Sbjct:  737 EQAVGGIYSVLNRKRGQVVSEEQRPGTPL 765          
BLAST of CN181761 vs. ExPASy Swiss-Prot
Match: EF2_CANGA (Elongation factor 2 OS=Candida glabrata GN=EFT1 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.520e-30
Identity = 45/79 (56.96%), Postives = 59/79 (74.68%), Query Frame = -3
Query:  324 PFYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 560
            P + +KAYLPV ESFGF+G LR AT GQAFPQ VFDHW  ++SDPL+P ++A ++V   RKR G+KE++    E+ DKL
Sbjct:  764 PLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWATLNSDPLDPTSKAGEIVTAARKRHGMKEEVPGWQEYYDKL 842          

HSP 2 Score: 50.0618 bits (118), Expect = 6.520e-30
Identity = 23/29 (79.31%), Postives = 25/29 (86.21%), Query Frame = -2
Query:  556 EQALGGIYSVLNQKRGHVFEEMQRPGTPL 642
            EQA+GGIYSVLN+KRG V  E QRPGTPL
Sbjct:  737 EQAVGGIYSVLNKKRGQVVSEEQRPGTPL 765          
BLAST of CN181761 vs. ExPASy Swiss-Prot
Match: EF2_CAEEL (Elongation factor 2 OS=Caenorhabditis elegans GN=eft-2 PE=2 SV=4)

HSP 1 Score: 103.219 bits (256), Expect = 1.105e-29
Identity = 47/79 (59.49%), Postives = 58/79 (73.42%), Query Frame = -3
Query:  324 PFYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 560
            P + +KAYLPV ESFGF+  LR+ T GQAFPQCVFDHW ++  DPLE GT+  Q+V D RKRKGLKE +  L  + DK+
Sbjct:  774 PMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVPALDNYLDKM 852          

HSP 2 Score: 46.2098 bits (108), Expect = 1.105e-29
Identity = 20/29 (68.97%), Postives = 24/29 (82.76%), Query Frame = -2
Query:  556 EQALGGIYSVLNQKRGHVFEEMQRPGTPL 642
            E A+GGIY VLN++RGHVFEE Q  GTP+
Sbjct:  747 EAAVGGIYGVLNRRRGHVFEESQVTGTPM 775          
BLAST of CN181761 vs. ExPASy Swiss-Prot
Match: EF2_CRIGR (Elongation factor 2 OS=Cricetulus griseus GN=EEF2 PE=3 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 3.175e-29
Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = -3
Query:  324 PFYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 560
            P + +KAYLPV ESFGF+  LR+ T GQAFPQCVFDHW ++  DP +  ++ +Q+VA+ RKRKGLKE +  L  F DKL
Sbjct:  780 PMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRGSQVVAETRKRKGLKEGIPALDNFLDKL 858          

HSP 2 Score: 48.1358 bits (113), Expect = 3.175e-29
Identity = 21/29 (72.41%), Postives = 24/29 (82.76%), Query Frame = -2
Query:  556 EQALGGIYSVLNQKRGHVFEEMQRPGTPL 642
            EQ +GGIY VLN+KRGHVFEE Q  GTP+
Sbjct:  753 EQVVGGIYGVLNRKRGHVFEESQVAGTPM 781          
The following BLAST results are available for this feature:
BLAST of CN181761 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
EF2_BETVU9.252e-4684.81Elongation factor 2 OS=Beta vulgaris PE=2 SV=1[more]
EF2_CHLKE1.614e-3872.15Elongation factor 2 OS=Chlorella kessleri PE=2 SV=... [more]
EF2_SCHPO8.863e-3363.29Elongation factor 2 OS=Schizosaccharomyces pombe G... [more]
EF2_ASHGO2.268e-3058.23Elongation factor 2 OS=Ashbya gossypii GN=EFT1 PE=... [more]
EF2_KLULA2.954e-3055.70Elongation factor 2 OS=Kluyveromyces lactis GN=EFT... [more]
EF2_YEAST6.520e-3056.96Elongation factor 2 OS=Saccharomyces cerevisiae GN... [more]
EF2_SACKL6.520e-3056.96Elongation factor 2 OS=Saccharomyces kluyveri GN=E... [more]
EF2_CANGA6.520e-3056.96Elongation factor 2 OS=Candida glabrata GN=EFT1 PE... [more]
EF2_CAEEL1.105e-2959.49Elongation factor 2 OS=Caenorhabditis elegans GN=e... [more]
EF2_CRIGR3.175e-2956.96Elongation factor 2 OS=Cricetulus griseus GN=EEF2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001H02_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181761 ID=CN181761; Name=CN181761; organism=Citrus sinensis; type=EST; length=643bp
GGCCAGAATTAGTTTAAACACATGACAGAACATCAAACCTTAAAAGCTGT
GAATTGTAAAATTTAAAACCTAGATGACAGAGACAGGGTTACTAAACCCA
ATCAACAGTAATATTACTTTACTAAACACAATGAGGATATTGAAAAACTT
TGAAACAAAAATAAGCATCAGCAAAAAATATTGCTGCGCAATCTCACCCT
TGATGTCAAGATGAAATGTTTACAGCTCGTCCTCTACTCGGATAGCGGTG
TCATTTGCTCCCTCTTCCTGATATCAGCAACAAGCTGCGCAATCTCACCC
TTGATGTCAAGACGAAATGTTTACAGCTTGTCCTCAAACTCAGATAGTGG
TGTCATTTGCTCCTTCAAGCCCTTCCTCTTCCTGATATCAGCAACAAGCT
GTGCAGCCTGTGTACCAGGCTCCAGTGGATCGGATGACATCATGTCCCAG
TGATCAAACACACATTGTGGGAAGGCCTGTCCTGACGTTGCAGCCCTCAA
AGTGCCTGAGAATCCAAAGGACTCGATGACGGGAAGGTAAGCCTTGATGT
TGTAAAAGGGGGGTACCAGGTCTCTGCATTTCCTCGAACACGTGACCACG
TTTCTGATTGAGAACACTGTAAATACCACCCAAGGCCTGCTCG
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