CN188700

Overview
NameCN188700
Unique NameCN188700
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length675
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188700 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.801e-39
Identity = 91/148 (61.49%), Postives = 98/148 (66.22%), Query Frame = -1
Query:  256 SIFGNR--SVFDPFSSDVWAPL------GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWPRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 675
            S FG R  SVFDPFS DVW P        S S E S F S +VDWKET EAHVFKAD+PGL         +DGRVLQISGER+VEKEDKND W RVER  GK VRRFRLPENAK+DQVKASMENGVL              K+I I+G
Sbjct:    6 SFFGGRRSSVFDPFSLDVWDPFKDFPFPSSLSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIDISG 153          
BLAST of CN188700 vs. ExPASy Swiss-Prot
Match: HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.352e-39
Identity = 89/148 (60.14%), Postives = 104/148 (70.27%), Query Frame = -1
Query:  256 IFGNR---SVFDPFSSDVWAPL------GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWPRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 672
            IFG+R   S+FDPFS DV+ P       G++S E S FA+ ++DWKET EAHVFKADLPGL         E+ RVLQISGER++EKEDKNDKW RVER  GKF+RRFRLPENAK+DQVKASMENGVL              KSI+I+G
Sbjct:    7 IFGDRRSSSMFDPFSIDVFDPFRELGFPGTNSGETSAFANTRIDWKETPEAHVFKADLPGLKLEEVKVEVEEDRVLQISGERNMEKEDKNDKWQRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEMKKPDVKSIEISG 154          
BLAST of CN188700 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 8.936e-39
Identity = 92/148 (62.16%), Postives = 104/148 (70.27%), Query Frame = -1
Query:  256 IFGNR---SVFDPFSSDVWAP---LG---SSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWPRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 672
            IFG+R   SVFDPFS DV+ P   LG   S+S E S FA+ ++DWKET EAHVFKADLPGL         E+ RVLQISGER+VEKEDKND W RVER  GKF+RRFRLPENAK+DQVKASMENGVL              KSI+I+G
Sbjct:    7 IFGDRRSTSVFDPFSIDVFDPFKELGFTVSNSGETSAFANTRIDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVNNPDVKSIEISG 154          
BLAST of CN188700 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.290e-37
Identity = 90/149 (60.40%), Postives = 97/149 (65.10%), Query Frame = -1
Query:  256 GNRS-VFDPFSSDVWAPL-----------GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWPRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 666
            G RS VFDPFS DVW PL            S   E   F S +VDWKET EAHVFKADLPGL         ED RVLQISGERSVEKEDKND+W RVER  GKF+RRFRLPENAK+D+VKASMENGVL              KSI+I+G
Sbjct:   10 GRRSNVFDPFSLDVWDPLKDFPFSNSSPSASFPRENPAFVSTRVDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKMDKVKASMENGVLTVTVPKEEIKKAEVKSIEISG 158          
BLAST of CN188700 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.201e-37
Identity = 88/153 (57.52%), Postives = 98/153 (64.05%), Query Frame = -1
Query:  256 SIFGNR--SVFDPFSSDVWAPL-----------GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWPRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 675
            S FG R  +VFDPFS DVW P             S   E S F S +VDWKET EAHVFKADLPG+         ED RVLQISGERSVEKEDKND+W R+ER  GKF+RRFRLPENAK+DQVKA+MENGVL              K+I I+G
Sbjct:    6 SFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSASFPRENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158          
BLAST of CN188700 vs. ExPASy Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.875e-37
Identity = 86/148 (58.11%), Postives = 101/148 (68.24%), Query Frame = -1
Query:  256 IFGNR---SVFDPFSSDVWAPL------GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWPRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 672
            IFG+R   S+FDPFS DV+ P        ++S E S FA+ ++DWKET E HVFK DLPGL         E+ RVLQISGER+VEKEDKNDKW R+ER  GKF+RRFRLPENAK+DQVKASMENGVL              KSI+I+G
Sbjct:    7 IFGDRRSSSMFDPFSIDVFDPFRELGFPSTNSGESSAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVKKPEVKSIEISG 154          
BLAST of CN188700 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.904e-37
Identity = 86/147 (58.50%), Postives = 97/147 (65.99%), Query Frame = -1
Query:  256 FGNR--SVFDPFSSDVW-------APLGSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWPRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 669
            FG R  +VFDPFS D+W        P  S S E S F S +VDWKET EAHVFKAD+PGL         ED RVLQISGER+VEKEDKND W RVER  GKF RRFRLPENAK+++VKASMENGVL              K+I+I+G
Sbjct:    8 FGGRRSNVFDPFSLDMWDPFKDFHVPTSSVSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENAKVNEVKASMENGVLTVTVPKEEVKKPDVKAIEISG 154          
BLAST of CN188700 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.404e-37
Identity = 86/148 (58.11%), Postives = 99/148 (66.89%), Query Frame = -1
Query:  256 SIFGNR--SVFDPFSSDVWAPLG------SSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWPRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 675
            SIFG R  +VFDPFS DVW P        S S E S F + +VDWKET EAHVF+AD+PGL         ED RVLQISGER++EKEDKND W RVER  G F+RRFRLPENAK++QVKASMENGVL              K+I+I+G
Sbjct:    6 SIFGGRRSNVFDPFSLDVWDPFKDFHFPTSLSAENSAFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 153          
BLAST of CN188700 vs. ExPASy Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 8.364e-37
Identity = 86/156 (55.13%), Postives = 101/156 (64.74%), Query Frame = -1
Query:  250 SIFGNR--SVFDPFSSDVWAPL------------GSSSNEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWPRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG*N 675
            SIFG R  +VFDPFS D+W P              S++ +V+ F +A+VDWKET EAHVFKADLPGL         ED  VLQISGERS E E+KNDKW RVER  GKF+RRFRLPENAK+++VKA+MENGVL              KSI I+G N
Sbjct:    6 SIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISGAN 161          
BLAST of CN188700 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.427e-36
Identity = 88/156 (56.41%), Postives = 101/156 (64.74%), Query Frame = -1
Query:  256 SIFGNR--SVFDPFSSDVWAP---------LGSSS-----NEVSTFASAQVDWKETREAHVFKADLPGLXXXXXXXXXEDGRVLQISGERSVEKEDKNDKWPRVERGRGKFVRRFRLPENAKIDQVKASMENGVLXXXXXXXXXXXXXXKSIQITG 675
            + FG R  +VFDPFS DVW P         L S+S      E S F S +VDWKET EAHVFKAD+PGL         ED +VLQISGER+VEKEDKND W RVER  GKF+RRFRLPENAK++QVKASMENGVL              K+I+I+G
Sbjct:    6 NFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161          
The following BLAST results are available for this feature:
BLAST of CN188700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
HSP11_SOYBN1.801e-3961.4917.3 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_SOLPE2.352e-3960.1417.7 kDa class I heat shock protein OS=Solanum per... [more]
HSP12_SOLPE8.936e-3962.1617.6 kDa class I heat shock protein OS=Solanum per... [more]
HSP11_PEA1.290e-3760.4018.1 kDa class I heat shock protein OS=Pisum sativ... [more]
HSP12_MEDSA2.201e-3757.5218.2 kDa class I heat shock protein OS=Medicago sa... [more]
HSP11_SOLLC2.875e-3758.1117.8 kDa class I heat shock protein OS=Solanum lyc... [more]
HSP14_SOYBN4.904e-3758.5017.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP13_SOYBN6.404e-3758.1117.5 kDa class I heat shock protein OS=Glycine max... [more]
HS181_ARATH8.364e-3755.1318.1 kDa class I heat shock protein OS=Arabidopsis... [more]
HSP16_SOYBN1.427e-3656.4118.5 kDa class I heat shock protein OS=Glycine max... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006J16_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006J16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188700 ID=CN188700; Name=CN188700; organism=Citrus sinensis; type=EST; length=675bp
TGAGAGCTTGCCACAAGCACTATCCCTTAAGGTGGACAACCAAAATATTG
GCTACGTCCCCGGTCCCATGAATTAATAATTAATATATTTCTCCTTCAAG
AAAACAACATATTTTTATTACTTAAAAAAGCAGTCGACAACACATTACAT
GAACAAAAGTATGCGACACACTTAACAGCAATCGCACATCGTTCATTAAC
ACACAGAACAAAACAAGAACCAAATTAAAAAGGCTGCAATTAACGGAGAG
TTTCAACCAGTGATCTGAATGGATTTGACCTCAGGCTTCTTCTCCTCCAC
TTTGGGAACAGTGACGGTGAGGACACCATTCTCCATTGATGCCTTAACTT
GATCGATCTTGGCATTCTCAGGCAACCGGAACCTCCTCACGAACTTGCCG
CGGCCCCTCTCAACACGGGGCCATTTGTCGTTCTTGTCTTCCTTCTCGAC
GCTCCTCTCACCGCTGATCTGAAGGACTCTCCCGTCCTCAACTTCAACCT
TCACTTCCTCTTTCTTGAGCCCCGGAAGATCCGCCTTGAAAACATGAGCT
TCCCGGGTTTCTTTCCAATCGACTTGAGCACTGGCGAATGTTGACACCTC
GTTGCTGGAGGAGCCAAGGGGCGCCCAGACGTCCGAGGAAAATGGGTCGA
ACACGCTCCTGTTTCCGAATATAGA
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