CN181732
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODF_SOYBN (Superoxide dismutase [Fe], chloroplastic OS=Glycine max GN=SODB PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 8.855e-34 Identity = 71/102 (69.61%), Postives = 77/102 (75.49%), Query Frame = -2 Query: 189 TQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWD-YSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKAPAT 491 TQFGSGWAWL Y+ P P E D L+V+K+PNAVNPLVW Y PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSW++VS RLE AKA T Sbjct: 146 TQFGSGWAWLAYRARKFDGENVANPPSPDE-DNKLVVLKSPNAVNPLVWGGYYPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWDAVSSRLEQAKALIT 246
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODF_NICPL (Superoxide dismutase [Fe], chloroplastic (Fragment) OS=Nicotiana plumbaginifolia GN=SODB PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.666e-30 Identity = 64/98 (65.31%), Postives = 73/98 (74.49%), Query Frame = -2 Query: 198 TQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 491 TQFGSGWAWL YK ++K L +VKTPNA NPLV Y+PLLTIDVWEHAYYLDFQNRRPDYIS+FM+KLVSWE+VS RL++A A Sbjct: 121 TQFGSGWAWLAYKP----------------EEKKLALVKTPNAENPLVLGYTPLLTIDVWEHAYYLDFQNRRPDYISIFMEKLVSWEAVSSRLKAATA 202
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODF_ARATH (Superoxide dismutase [Fe], chloroplastic OS=Arabidopsis thaliana GN=SODB PE=1 SV=4) HSP 1 Score: 122.094 bits (305), Expect = 2.112e-27 Identity = 62/98 (63.27%), Postives = 67/98 (68.37%), Query Frame = -2 Query: 198 TQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 491 TQFG+GWAWL Y ++ L VVKTPNAVNPLV PLLTIDVWEHAYYLDFQNRRPDYI FM LVSWE+VS RLE+AKA Sbjct: 130 TQFGAGWAWLAYS------------------NEKLKVVKTPNAVNPLVLGSFPLLTIDVWEHAYYLDFQNRRPDYIKTFMTNLVSWEAVSARLEAAKA 209
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODF_PLEBO (Superoxide dismutase [Fe] OS=Plectonema boryanum GN=sodB PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.266e-20 Identity = 49/93 (52.69%), Postives = 58/93 (62.37%), Query Frame = -2 Query: 213 TQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 491 TQFGSGWAWLV + +L V KTPNA NPLV PLLT+DVWEHAYYLDFQN RP +I F+D LV+W+ V++ L Sbjct: 123 TQFGSGWAWLV------------------DDGGTLKVTKTPNAENPLVHGQKPLLTLDVWEHAYYLDFQNARPAFIKNFLDNLVNWDFVAQNL 197
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODF_SYNY3 (Superoxide dismutase [Fe] OS=Synechocystis sp. (strain PCC 6803) GN=sodB PE=1 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 5.572e-20 Identity = 49/96 (51.04%), Postives = 61/96 (63.54%), Query Frame = -2 Query: 204 TQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 491 TQFGSGWAWLV + +L V KT NA NP+ +PLLT+DVWEHAYYLD+QNRRPDYI+ F+ KLV+W+ V+ L +A Sbjct: 122 TQFGSGWAWLVLD------------------NGTLKVTKTGNAENPMTAGQTPLLTMDVWEHAYYLDYQNRRPDYIADFLGKLVNWDFVAANLAAA 199
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODF_SYNE7 (Superoxide dismutase [Fe] OS=Synechococcus elongatus (strain PCC 7942) GN=sodB PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.117e-19 Identity = 48/98 (48.98%), Postives = 59/98 (60.20%), Query Frame = -2 Query: 198 TQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 491 TQFGSGWAWLV + +L + KT NA P+ +PLLTIDVWEHAYYLD+QNRRPDYIS F++KL +W+ S +A A Sbjct: 122 TQFGSGWAWLVLD------------------NGTLKITKTGNADTPIAHGQTPLLTIDVWEHAYYLDYQNRRPDYISTFVEKLANWDFASANYAAAIA 201
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODF_RHOCA (Superoxide dismutase [Fe] OS=Rhodobacter capsulatus GN=sodB PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.051e-18 Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = -2 Query: 213 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 488 QFGSGWAWLV + D +L + KT N VNPL + + LL DVWEH+YY+DF+N+RP Y++ F+DKLV+WE+V+ R+ Sbjct: 126 QFGSGWAWLV-----------------KDSDGALKITKTENGVNPLCFGQTALLGCDVWEHSYYIDFRNKRPAYLTNFLDKLVNWENVASRM 200
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODF_RICCN (Superoxide dismutase [Mn/Fe] OS=Rickettsia conorii GN=sodB PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.415e-17 Identity = 38/92 (41.30%), Postives = 53/92 (57.61%), Query Frame = -2 Query: 213 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 488 QFGSGWAWL+Y D L ++KT NA P+ PLL DVWEHAYY+D++N+RPDY+ +F+ +++W+ V L Sbjct: 134 QFGSGWAWLIYH------------------DNRLQIIKTANAGTPIAHGMKPLLACDVWEHAYYIDYRNKRPDYVDIFIKHMINWKFVEDNL 207
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODF_RICBR (Superoxide dismutase [Mn/Fe] OS=Rickettsia bellii (strain RML369-C) GN=sodB PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.415e-17 Identity = 40/92 (43.48%), Postives = 53/92 (57.61%), Query Frame = -2 Query: 213 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 488 QFGSGWAWLVY + L +VKT NA P+ PLL DVWEHAYY+D++N+RPDY+ +F+ +++WE V L Sbjct: 134 QFGSGWAWLVYH------------------NNRLQIVKTANAGTPIANGMQPLLACDVWEHAYYIDYRNKRPDYVDIFIKHMINWEFVENNL 207
BLAST of CN181732 vs. ExPASy Swiss-Prot
Match: SODF_RHIME (Superoxide dismutase [Mn] OS=Rhizobium meliloti GN=sodB PE=1 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 4.415e-17 Identity = 41/95 (43.16%), Postives = 57/95 (60.00%), Query Frame = -2 Query: 204 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 488 QFGSGWAWL S K+ L + KTPN NPLV +P+L +DVWEH+YY+D++N RP Y+ F+D L++W+ V + E+A Sbjct: 122 QFGSGWAWL------------------SVKNGKLEISKTPNGENPLVHGATPILGVDVWEHSYYIDYRNARPKYLEAFVDNLINWDYVLELYEAA 198 The following BLAST results are available for this feature:
BLAST of CN181732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 110
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181732 ID=CN181732; Name=CN181732; organism=Citrus sinensis; type=EST; length=597bpback to top |