CN181730

Overview
NameCN181730
Unique NameCN181730
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length589
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1875 contig Csv1_Contig1875:183..770. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2)

HSP 1 Score: 288.886 bits (738), Expect = 2.449e-78
Identity = 125/175 (71.43%), Postives = 141/175 (80.57%), Query Frame = -1
Query:   38 RGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVLGP 562
            RGQ W I    GTK AR+W RT C FD +G+GKC+TGDCNGLL+CQ +G  PNTLAEYAL QFN++DF D+S +DGFNV MEFS  S  C R IKCTA+I G+CPNEL+ PGGCN PC VFKTD+YCCNSGNCG T FSKFFKDRCPD YSYPKDD TSTFTCP+GT+YKVV  P
Sbjct:   51 RGQNWIINPGAGTKGARVWPRTGCNFDGAGRGKCQTGDCNGLLQCQAFGQPPNTLAEYALNQFNNLDFFDISLVDGFNVAMEFSPTSGGCTRGIKCTADINGQCPNELRAPGGCNNPCTVFKTDQYCCNSGNCGLTNFSKFFKDRCPDAYSYPKDDQTSTFTCPAGTNYKVVFCP 225          

HSP 2 Score: 24.6386 bits (52), Expect = 2.449e-78
Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = -3
Query:  552 PGGGRQLDKGSN 587
            PGGG++LD+G N
Sbjct:   43 PGGGKRLDRGQN 54          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: P21_SOYBN (Protein P21 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 8.004e-72
Identity = 114/174 (65.52%), Postives = 136/174 (78.16%), Query Frame = -1
Query:   38 GQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVLGP 559
            GQ+W++    GTK AR+WART C FD SG+G C+TGDC G+L+C+ YGA PNTLAEY L  FN++DF D+S +DGFNVPM+FS  S  C R I CTA+I G+CP+ELK  GGCN PC VFKTD+YCCNSG+CGPT +S+FFK RCPD YSYPKDD  STFTC  GTDY+VV  P
Sbjct:   29 GQSWSVDVPAGTKGARVWARTGCNFDGSGRGGCQTGDCGGVLDCKAYGAPPNTLAEYGLNGFNNLDFFDISLVDGFNVPMDFSPTSNGCTRGISCTADINGQCPSELKTQGGCNNPCTVFKTDQYCCNSGSCGPTDYSRFFKQRCPDAYSYPKDDPPSTFTCNGGTDYRVVFCP 202          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: PRR1_TOBAC (Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 1.091e-66
Identity = 113/176 (64.20%), Postives = 135/176 (76.70%), Query Frame = -1
Query:   38 GQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNS--GNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVLGP 559
            GQ+W+I   PGT  ARIW RT C FD SG+G CETGDCNG+LECQGYG APNTLAE+AL Q N  DF+D+S +DGFN+PMEFS  +  C R ++CTA I  +CP +LK  GGCN PC V KT+EYCC +  G+CGPT  S+FFK+RCPD YSYP+DD TS FTCPSGT+Y+VV  P
Sbjct:   53 GQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYGKAPNTLAEFALNQPN-QDFVDISLVDGFNIPMEFSPTNGGC-RNLRCTAPINEQCPAQLKTQGGCNNPCTVIKTNEYCCTNGPGSCGPTDLSRFFKERCPDAYSYPQDDPTSLFTCPSGTNYRVVFCP 226          

HSP 2 Score: 23.0978 bits (48), Expect = 1.091e-66
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = -3
Query:  552 PGGGRQLDKGSN 587
            PGGGR+LD G +
Sbjct:   44 PGGGRRLDSGQS 55          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: OSMO_TOBAC (Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2)

HSP 1 Score: 251.906 bits (642), Expect = 1.727e-66
Identity = 111/178 (62.36%), Postives = 133/178 (74.72%), Query Frame = -1
Query:   38 RGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSG-TDYKVVLGP 562
            RGQTW I A  GTK AR+W RT C F+A+G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+ +DF D+S +DGFN+PM F+  +PS  +   I CTANI GECP EL+VPGGCN PC  F   +YCC  G CGPT FSKFFK RCPD YSYP+DD TSTFTCP G T+Y+V+  P
Sbjct:   49 RGQTWVINAPRGTKMARVWGRTNCNFNAAGRGTCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSGLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPRELRVPGGCNNPCTTFGGQQYCCTQGPCGPTFFSKFFKQRCPDAYSYPQDDPTSTFTCPGGSTNYRVIFCP 226          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: OS13_SOLCO (Osmotin-like protein OSML13 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 2.946e-66
Identity = 111/178 (62.36%), Postives = 132/178 (74.16%), Query Frame = -1
Query:   38 RGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSG-TDYKVVLGP 562
            RGQTW I A  GTK ARIW RT C FD +G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+++DF D+S +DGFN+PM F+  +PS  +   I CTANI GECP  L+VPGGCN PC  F   +YCC  G CGPT  S+FFK RCPD YSYP+DD TSTFTCPSG T+Y+VV  P
Sbjct:   49 RGQTWVINAPRGTKMARIWGRTNCNFDGAGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 226          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: TPM1_SOLLC (Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 3.847e-66
Identity = 111/178 (62.36%), Postives = 131/178 (73.60%), Query Frame = -1
Query:   38 RGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSG-TDYKVVLGP 562
            RGQTW I A  GTK ARIW RT C FD  G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+++DF D+S +DGFN+PM F+  +PS  +   I CTANI GECP  L+VPGGCN PC  F   +YCC  G CGPT  S+FFK RCPD YSYP+DD TSTFTCPSG T+Y+VV  P
Sbjct:   41 RGQTWVINAPRGTKMARIWGRTNCNFDGDGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 218          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: OS81_SOLCO (Osmotin-like protein OSML81 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 3.847e-66
Identity = 112/178 (62.92%), Postives = 132/178 (74.16%), Query Frame = -1
Query:   38 RGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSG-TDYKVVLGP 562
            +GQTW I A  GTK ARIW RT C F+A+G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+++DF D+S +DGFN+PM F+   PS  +   I CTANI GECP  LKVPGGCN PC  F   +YCC  G CGPT  SKFFK RCPD YSYP+DD TSTFTCPSG T+Y+VV  P
Sbjct:   49 KGQTWVINAPRGTKMARIWGRTGCNFNAAGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSAGKCHAIHCTANINGECPRALKVPGGCNNPCTTFGGQQYCCTQGPCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 226          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: NP24_SOLLC (Protein NP24 OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 1.462e-65
Identity = 112/178 (62.92%), Postives = 131/178 (73.60%), Query Frame = -1
Query:   38 RGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSG-TDYKVVLGP 562
            RGQTW I A  GTK ARIW RT C F+A+G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+++DF D+S +DGFN+PM F+   PS  +   I CTANI GECP  LKVPGGCN PC  F   +YCC  G CGPT  SKFFK RCPD YSYP+DD TSTFTCP G T+Y+VV  P
Sbjct:   49 RGQTWVINAPRGTKMARIWGRTGCNFNAAGRGTCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSGGKCHAIHCTANINGECPRALKVPGGCNNPCTTFGGQQYCCTQGPCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPGGSTNYRVVFCP 226          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: ZEAM_MAIZE (Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2)

HSP 1 Score: 248.054 bits (632), Expect = 2.494e-65
Identity = 113/179 (63.13%), Postives = 135/179 (75.42%), Query Frame = -1
Query:   38 RGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPS-CNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCC---NSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVLGP 562
            RG++W ITA  GT AARIWART C+FDASG+G C TGDC G+L+C GYG APNTLAEYALKQFN++DF D+S IDGFNVPM F     S C+R  +C  ++   CP EL+  G CN  CPVFK DEYCC    + +C PT +S++FK +CPD YSYPKDDATSTFTCP+GT+YKVV  P
Sbjct:   49 RGESWRITAPAGTTAARIWARTGCKFDASGRGSCRTGDCGGVLQCTGYGRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCSRGPRCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANDCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 227          
BLAST of CN181730 vs. ExPASy Swiss-Prot
Match: OSL3_ARATH (Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 3.438e-65
Identity = 107/176 (60.80%), Postives = 139/176 (78.98%), Query Frame = -1
Query:   38 GQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNS--GNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVLGP 559
            GQ+W +  A GTK ARIW RT C FD+SG+G+C+TGDC+G L+C G+G  PNTLAEYAL QFN++DF D+S +DGFN+PMEFS  S +C+R++ CTA+I G+CPN L+ PGGCN PC VF+T++YCC +  G+C  T +S+FFK RCPD YSYP+DD TSTFTC + T+Y+VV  P
Sbjct:   50 GQSWRLDVAAGTKMARIWGRTNCNFDSSGRGRCQTGDCSGGLQCTGWGQPPNTLAEYALNQFNNLDFYDISLVDGFNIPMEFSPTSSNCHRIL-CTADINGQCPNVLRAPGGCNNPCTVFQTNQYCCTNGQGSCSDTEYSRFFKQRCPDAYSYPQDDPTSTFTC-TNTNYRVVFCP 223          

HSP 2 Score: 22.7126 bits (47), Expect = 3.438e-65
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = -3
Query:  552 PGGGRQLDKGSN 587
            PGGGR+LD G +
Sbjct:   41 PGGGRRLDAGQS 52          
The following BLAST results are available for this feature:
BLAST of CN181730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
TLP_ACTDE2.449e-7871.43Thaumatin-like protein OS=Actinidia deliciosa GN=t... [more]
P21_SOYBN8.004e-7265.52Protein P21 OS=Glycine max PE=1 SV=1[more]
PRR1_TOBAC1.091e-6664.20Pathogenesis-related protein R major form OS=Nicot... [more]
OSMO_TOBAC1.727e-6662.36Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2[more]
OS13_SOLCO2.946e-6662.36Osmotin-like protein OSML13 OS=Solanum commersonii... [more]
TPM1_SOLLC3.847e-6662.36Osmotin-like protein TPM-1 (Fragment) OS=Solanum l... [more]
OS81_SOLCO3.847e-6662.92Osmotin-like protein OSML81 OS=Solanum commersonii... [more]
NP24_SOLLC1.462e-6562.92Protein NP24 OS=Solanum lycopersicum PE=1 SV=2[more]
ZEAM_MAIZE2.494e-6563.13Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2[more]
OSL3_ARATH3.438e-6560.80Osmotin-like protein OSM34 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001G08_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181730 ID=CN181730; Name=CN181730; organism=Citrus sinensis; type=EST; length=589bp
TTCTATTTCCATTTCTACCCCTGAAAAAAATGCTTCAGGGGCCCAATACA
ACCTTGTAGTCGGTCCCACTCGGGCAAGTAAATGTGCTGGTAGCGTCATC
CTTAGGGTAACTGTAAACATCCGGGCACCTATCCTTGAAAAACTTGGAGA
AACCTGTAGGTCCGCAGTTGCCTGAATTGCAACAGTACTCGTCGGTCTTG
AACACGGGGCACGGCCCGTTACATCCTCCAGGAACCTTCAATTCATTAGG
GCACTCGCCAAGAATGTTAGCAGTGCACTTGATCACGCGGTTGCATGAGG
GAGAGACAGAGCTAAATTCCATGGGAACATTGAATCCGTCAATGTTGGAC
ATGTCAATGAAATCCATGTCATTGAATTGCTTCAACGCGTACTCGGCCAA
GGTGTTAGGTGCTGCACCGTAGCCTTGGCACTCGAGGAGTCCGTTACAGT
CACCGGTCTCGCATTTGCCTTTGCCGGAAGCATCAAACTGGCATTTGGTT
CGAGCCCAAATGCGGGCTGCTTTTGTGCCTGGCGCGGCGGTGATGGTCCA
TGTTTGACCCCTTGTCGAGTTGCCTGCCGCCTCCGGGCA
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