CN181697

Overview
NameCN181697
Unique NameCN181697
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length511
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9291 contig Csv1_Contig9291:867..1376. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181697 vs. ExPASy Swiss-Prot
Match: CHS2_CITSI (Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 1.535e-48
Identity = 98/120 (81.67%), Postives = 98/120 (81.67%), Query Frame = -1
Query:  152 PGLISKNIEKSLFEGFAPLGIRDWNSIFWIAHPGGPAILAQVEFXXXXXXXXXKAPRQVLSEYGNMSRACVLFILDEMRKNFVEEAKAPPGEGLDWGVLFGFGPGFTVETVVLHSVPFKA 511
            PGLISKNIEKSL E FAPLGI DWNSIFWIAHPGGPAIL QVE          KA RQVLSEYGNMS ACVLFILDEMRK  VEEAKA  GEGLDWGVLFGFGPG TVETVVLHSVP KA
Sbjct:  272 PGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVESKLGLKGEKLKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 391          
BLAST of CN181697 vs. ExPASy Swiss-Prot
Match: CHS1_RUTGR (Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 3.200e-46
Identity = 92/120 (76.67%), Postives = 95/120 (79.17%), Query Frame = -1
Query:  152 PGLISKNIEKSLFEGFAPLGIRDWNSIFWIAHPGGPAILAQVEFXXXXXXXXXKAPRQVLSEYGNMSRACVLFILDEMRKNFVEEAKAPPGEGLDWGVLFGFGPGFTVETVVLHSVPFKA 511
            PGLISKNIEKSL E F P+GI DWNSIFWIAHPGGPAIL QVE          +A RQVLSEYGNMS ACVLFILDEMRKN  EE +A  GEGLDWGVLFGFGPG TVETVVL SVP KA
Sbjct:  274 PGLISKNIEKSLKEAFGPIGISDWNSIFWIAHPGGPAILDQVEAKLGLKEEKLRATRQVLSEYGNMSSACVLFILDEMRKNCAEEGRATTGEGLDWGVLFGFGPGLTVETVVLRSVPIKA 393          
BLAST of CN181697 vs. ExPASy Swiss-Prot
Match: CHSY_PETCR (Chalcone synthase OS=Petroselinum crispum GN=CHS PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 9.311e-46
Identity = 89/117 (76.07%), Postives = 94/117 (80.34%), Query Frame = -1
Query:  161 PGLISKNIEKSLFEGFAPLGIRDWNSIFWIAHPGGPAILAQVEFXXXXXXXXXKAPRQVLSEYGNMSRACVLFILDEMRKNFVEEAKAPPGEGLDWGVLFGFGPGFTVETVVLHSVP 511
            PGLISKNIEKSL E F P+GI DWNS+FWIAHPGGPAIL QVE          +A RQVLS+YGNMS ACVLFILDEMRK  +EE KA  GEGLDWGVLFGFGPG TVETVVLHSVP
Sbjct:  277 PGLISKNIEKSLKEAFGPIGISDWNSLFWIAHPGGPAILDQVELKLGLKEEKMRATRQVLSDYGNMSSACVLFILDEMRKKSIEEGKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 393          
BLAST of CN181697 vs. ExPASy Swiss-Prot
Match: CHS2_DAUCA (Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.074e-45
Identity = 88/117 (75.21%), Postives = 94/117 (80.34%), Query Frame = -1
Query:  161 PGLISKNIEKSLFEGFAPLGIRDWNSIFWIAHPGGPAILAQVEFXXXXXXXXXKAPRQVLSEYGNMSRACVLFILDEMRKNFVEEAKAPPGEGLDWGVLFGFGPGFTVETVVLHSVP 511
            PGLISKNIEKSL E F P+GI DWNS+FWIAHPGGPAIL QVE          +A RQVLS+YGNMS ACVLFILDEMRK  +EE KA  G+GLDWGVLFGFGPG TVETVVLHSVP
Sbjct:  276 PGLISKNIEKSLKEAFGPIGISDWNSLFWIAHPGGPAILDQVELKLGLKEEKMRATRQVLSDYGNMSSACVLFILDEMRKKSIEEGKATTGDGLDWGVLFGFGPGLTVETVVLHSVP 392          
BLAST of CN181697 vs. ExPASy Swiss-Prot
Match: CHS2_RUTGR (Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 6.035e-45
Identity = 90/120 (75.00%), Postives = 93/120 (77.50%), Query Frame = -1
Query:  152 PGLISKNIEKSLFEGFAPLGIRDWNSIFWIAHPGGPAILAQVEFXXXXXXXXXKAPRQVLSEYGNMSRACVLFILDEMRKNFVEEAKAPPGEGLDWGVLFGFGPGFTVETVVLHSVPFKA 511
            PGLISKNIEKSL E F P+GI DWNSIFWIAHPGGPAIL QVE          +A RQVLSEYGNMS ACVLFILDEMRK   EE +A  GEGLDWGVLFGFGPG TVETVVL SVP  A
Sbjct:  274 PGLISKNIEKSLKEAFGPIGISDWNSIFWIAHPGGPAILDQVEAKLGLKEEKLRATRQVLSEYGNMSSACVLFILDEMRKKCAEEGRATTGEGLDWGVLFGFGPGLTVETVVLRSVPINA 393          
BLAST of CN181697 vs. ExPASy Swiss-Prot
Match: CHSY_BETVE (Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 2.995e-44
Identity = 87/117 (74.36%), Postives = 93/117 (79.49%), Query Frame = -1
Query:  161 PGLISKNIEKSLFEGFAPLGIRDWNSIFWIAHPGGPAILAQVEFXXXXXXXXXKAPRQVLSEYGNMSRACVLFILDEMRKNFVEEAKAPPGEGLDWGVLFGFGPGFTVETVVLHSVP 511
            PG+ISKNIEKSL E FAPLGI DWNS+FWIAHPGGPAIL QVE          +A R VLSEYGNMS ACVLFILDEMR+N +E  K   GEGL+WGVLFGFGPG TVETVVLHSVP
Sbjct:  272 PGIISKNIEKSLAEAFAPLGISDWNSLFWIAHPGGPAILDQVESKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRRNSLEGGKVTTGEGLEWGVLFGFGPGLTVETVVLHSVP 388          
BLAST of CN181697 vs. ExPASy Swiss-Prot
Match: CHSY_VITVI (Chalcone synthase OS=Vitis vinifera GN=CHS PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 5.109e-44
Identity = 86/116 (74.14%), Postives = 91/116 (78.45%), Query Frame = -1
Query:  164 PGLISKNIEKSLFEGFAPLGIRDWNSIFWIAHPGGPAILAQVEFXXXXXXXXXKAPRQVLSEYGNMSRACVLFILDEMRKNFVEEAKAPPGEGLDWGVLFGFGPGFTVETVVLHSV 511
            PGLISKNIEKSL E F P+GI DWNS+FWIAHPGGPAIL QVE          +A R VLSEYGNMS ACVLFILDEMRK  +EE K   GEGL+WGVLFGFGPG TVETVVLHSV
Sbjct:  272 PGLISKNIEKSLVEAFTPIGISDWNSLFWIAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CN181697 vs. ExPASy Swiss-Prot
Match: CHS3_RUTGR (Chalcone synthase 3 OS=Ruta graveolens GN=CHS3 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 5.109e-44
Identity = 89/120 (74.17%), Postives = 92/120 (76.67%), Query Frame = -1
Query:  152 PGLISKNIEKSLFEGFAPLGIRDWNSIFWIAHPGGPAILAQVEFXXXXXXXXXKAPRQVLSEYGNMSRACVLFILDEMRKNFVEEAKAPPGEGLDWGVLFGFGPGFTVETVVLHSVPFKA 511
            PGLISKNIEKSL E F P+GI DWNSIFWIAHPGGPAIL QVE          +A R VLSEYGNMS ACVLFILDEMRK   EE  A  GEGL+WGVLFGFGPG TVETVVL SVP KA
Sbjct:  274 PGLISKNIEKSLKEAFGPIGISDWNSIFWIAHPGGPAILDQVEEKLELKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKCAEEGMATTGEGLEWGVLFGFGPGLTVETVVLRSVPIKA 393          
BLAST of CN181697 vs. ExPASy Swiss-Prot
Match: CHSY_ANTMA (Chalcone synthase OS=Antirrhinum majus GN=CHS PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 8.715e-44
Identity = 87/117 (74.36%), Postives = 93/117 (79.49%), Query Frame = -1
Query:  161 PGLISKNIEKSLFEGFAPLGIRDWNSIFWIAHPGGPAILAQVEFXXXXXXXXXKAPRQVLSEYGNMSRACVLFILDEMRKNFVEEAKAPPGEGLDWGVLFGFGPGFTVETVVLHSVP 511
            PGLISKNIEKSL E F PLGI DWNS+FWIAHPGGPAIL QVE          ++ RQVLSEYGNMS ACVLFILDEMRK+  +E  +  GEGLDWGVLFGFGPG TVETVVLHSVP
Sbjct:  272 PGLISKNIEKSLKEAFDPLGISDWNSVFWIAHPGGPAILDQVEEKLGLKPEKLRSTRQVLSEYGNMSSACVLFILDEMRKSSAKEGMSTTGEGLDWGVLFGFGPGLTVETVVLHSVP 388          
BLAST of CN181697 vs. ExPASy Swiss-Prot
Match: CHSY_CALCH (Chalcone synthase OS=Callistephus chinensis GN=CHS PE=2 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 1.487e-43
Identity = 85/117 (72.65%), Postives = 92/117 (78.63%), Query Frame = -1
Query:  161 PGLISKNIEKSLFEGFAPLGIRDWNSIFWIAHPGGPAILAQVEFXXXXXXXXXKAPRQVLSEYGNMSRACVLFILDEMRKNFVEEAKAPPGEGLDWGVLFGFGPGFTVETVVLHSVP 511
            PGLISKNIEK+L + F+PLGI DWNSIFWIAHPGGPAIL QVE          +A R VLSEYGNMS ACVLFI+DEMRK   E+  A  GEGLDWGVLFGFGPG TVETVVLHS+P
Sbjct:  275 PGLISKNIEKALTQAFSPLGITDWNSIFWIAHPGGPAILDQVELKLGLKEEKMRATRHVLSEYGNMSSACVLFIIDEMRKKSAEDGAATTGEGLDWGVLFGFGPGLTVETVVLHSLP 391          
The following BLAST results are available for this feature:
BLAST of CN181697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHS2_CITSI1.535e-4881.67Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=... [more]
CHS1_RUTGR3.200e-4676.67Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=... [more]
CHSY_PETCR9.311e-4676.07Chalcone synthase OS=Petroselinum crispum GN=CHS P... [more]
CHS2_DAUCA2.074e-4575.21Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 ... [more]
CHS2_RUTGR6.035e-4575.00Chalcone synthase 2 OS=Ruta graveolens GN=CHS2 PE=... [more]
CHSY_BETVE2.995e-4474.36Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 ... [more]
CHSY_VITVI5.109e-4474.14Chalcone synthase OS=Vitis vinifera GN=CHS PE=2 SV... [more]
CHS3_RUTGR5.109e-4474.17Chalcone synthase 3 OS=Ruta graveolens GN=CHS3 PE=... [more]
CHSY_ANTMA8.715e-4474.36Chalcone synthase OS=Antirrhinum majus GN=CHS PE=3... [more]
CHSY_CALCH1.487e-4372.65Chalcone synthase OS=Callistephus chinensis GN=CHS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001F14_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001F14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181697 ID=CN181697; Name=CN181697; organism=Citrus sinensis; type=EST; length=511bp
TTTTTTTTTTTTTTTTTAAAAAAAAAGGCACGATGCCTTAAACTCAATTG
ACAAAACTAAACCTTCCCACGATCAACCAATAACTCAACTGGGAAAGCAT
ACAACATAAAGTTACTGAACTACTAAACATACTGGTGGAGTTCTCACTTC
AAGCTTTGAAGGGGACACTGTGCAGCACAACGGTCTCCACGGTGAACCCC
GGCCCGAACCCGAACAGCACACCCCAATCAAGCCCTTCCCCGGGGGGGGC
TTTCGCTTCCTCAACAAAATTCTTTCTCATCTCGTCAAGGATGAACAAGA
CACAAGCCCTTGACATGTTACCGTACTCACTCAACACTTGACGTGGGGCC
TTCAGCTTCTCCCCTTTGAGGCCCAATTTAAACTCCACTTGGGCCAAAAT
TGCGGGCCCCCCGGGGTGAGCGATCCAAAATATCGAGTTCCAGTCCCTGA
TGCCAAGCGGGGCGAACCCTTCAAAAAGGCTTTTCTCTATATTCTTTGAA
ATCAAGCCGGG
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