CN181696

Overview
NameCN181696
Unique NameCN181696
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1526 contig Csv1_Contig1526:57..755. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181696 vs. ExPASy Swiss-Prot
Match: AAPC_CENCI (Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.667e-83
Identity = 146/190 (76.84%), Postives = 164/190 (86.32%), Query Frame = 1
Query:  124 EFCKGNNGLDKVVLRESRGSSAEVYLYGGHVTSWKNDHGEELLFVSSKATFKPPKAIRGGIPICFPQFASLGSLESHGFARNRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPHSFEFRLRVALTPGGDLMLISRVRNTSTDGKPFSFTFAYHTYFSVSDISEVRVEGLETLDYLDNLQNKERF 693
            E  K  +GL+KVVLR +R   AE+YLYGG VTSWKND+GEELLF+SSKA FKPPKAIRGGIPIC PQF + G+LE HGFARNRFWSID DPP  P N + KA++DLILRP+EEDLKIWPHSFEFRLRVAL P GDL L SR+RNT+TDG+PFS+TFAYHTYF VSDISEVRVEGLET+DYLDNL+ KERF
Sbjct:   25 ELVKTPSGLEKVVLRGARNCCAEIYLYGGQVTSWKNDNGEELLFLSSKAIFKPPKAIRGGIPICLPQFGTHGNLEQHGFARNRFWSIDNDPPPLPVNPAIKAFVDLILRPAEEDLKIWPHSFEFRLRVALGPSGDLSLTSRIRNTNTDGRPFSYTFAYHTYFFVSDISEVRVEGLETMDYLDNLKAKERF 214          
BLAST of CN181696 vs. ExPASy Swiss-Prot
Match: YEAD_ECOLI (Putative glucose-6-phosphate 1-epimerase OS=Escherichia coli (strain K12) GN=yeaD PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.462e-18
Identity = 67/191 (35.08%), Postives = 94/191 (49.21%), Query Frame = 1
Query:   88 FKIMSTEKFLPVEFCKGNNGLDKVVLRESRGSSAEVYLYGGHVTSWKNDHGEELLFVSSKATFKPPKAIRGGIPICFPQF--ASLGSLESHGFARNRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPHSFEF--RLRVALTPGGDLMLISRVRNTSTDGKPFSFTFAYHTYFSVSDISEVRVEGL 648
            F +   E+  PV   +  + LD +V+   +   A   L G H+ SWK    EE+L++S+   FK   AIRGG+P+C+P F  A+   L +HGFARN  W++ +         +    +   L  SEE  K WPH F      RV  T   DL          + G+ F  T A HTYF+V DI++V V GL
Sbjct:    6 FALPVIEQISPVLSRRKLDELDLIVVDHPQ-VKASFALQGAHLLSWKPAGEEEVLWLSNNTPFKNGVAIRGGVPVCWPWFGPAAQQGLPAHGFARNLPWTLKSH-----HEDADGVALTFELTQSEETKKFWPHDFTLLAHFRVGKTCEIDL---------ESHGE-FETTSALHTYFNVGDIAKVSVSGL 180          
BLAST of CN181696 vs. ExPASy Swiss-Prot
Match: YMY9_YEAST (Glucose-6-phosphate 1-epimerase OS=Saccharomyces cerevisiae GN=YMR099C PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.024e-13
Identity = 57/175 (32.57%), Postives = 75/175 (42.86%), Query Frame = 1
Query:  181 SSAEVYLYGGHVTSWKNDHGEELLFVSSKATFKPPKAIRGGIPICFPQFAS------LGSLESHGFARNRFWSIDTDPPAFPTNSSSKAYIDLILRP---SEEDLKIWPHSFEFRLRVALTPGGD-LMLISRVRNTSTDGKPFSFTFAYHTYFSVSDISEVRVEGLETLDYLDNL 675
            +S  +  YG  V SWK    EE L++S+ A     K +RGGIP+ FP F        L  L  HG ARN  W              +   +   L+P   + E  K+WP  +   L V L  G D L     V NTS+  K   F + +HTYF + DI    V  L  +   D L
Sbjct:   20 TSVHILKYGATVYSWKLK-SEEQLWLSTAAKLDGSKPVRGGIPLVFPVFGKNSTDEHLSKLPQHGLARNSTWEF------LGQTKENPPTVQFGLKPEIANPELTKLWPMDYLLILTVEL--GSDYLKTAIEVENTSS-SKELKFNWLFHTYFRIEDIEGTMVSNLAGMKLYDQL 184          
The following BLAST results are available for this feature:
BLAST of CN181696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
AAPC_CENCI1.667e-8376.84Putative glucose-6-phosphate 1-epimerase OS=Cenchr... [more]
YEAD_ECOLI5.462e-1835.08Putative glucose-6-phosphate 1-epimerase OS=Escher... [more]
YMY9_YEAST9.024e-1332.57Glucose-6-phosphate 1-epimerase OS=Saccharomyces c... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0001F13_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001F13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181696 ID=CN181696; Name=CN181696; organism=Citrus sinensis; type=EST; length=699bp
GGAGATTTCATTTTCATATCAAATGCTGTGAATTTTCACATTAAACGAAG
AGTAGAAAATCTTGGCGGCGGCGGTGGCGGCAGCGGCTTCAAAATCATGT
CGACGGAGAAGTTTCTTCCAGTTGAGTTCTGCAAGGGCAATAACGGCCTC
GACAAGGTCGTTCTCCGCGAGTCACGCGGCAGCTCCGCTGAGGTGTATTT
GTACGGGGGTCATGTGACGTCTTGGAAGAATGATCATGGAGAGGAATTGC
TTTTTGTCAGTAGTAAGGCTACATTCAAGCCTCCCAAAGCGATTCGCGGA
GGAATTCCAATCTGCTTTCCTCAGTTTGCAAGTCTTGGCTCTCTGGAGTC
GCATGGGTTTGCTAGAAATCGGTTTTGGAGTATTGACACTGACCCGCCTG
CTTTTCCAACTAATTCCTCAAGTAAGGCTTATATTGATTTGATACTAAGG
CCCTCGGAAGAAGATCTGAAGATCTGGCCTCACAGTTTTGAGTTCCGTCT
CAGGGTAGCTTTGACTCCTGGTGGTGATCTGATGTTGATCTCTCGCGTTA
GGAATACTAGCACTGATGGAAAGCCATTTTCGTTCACATTTGCATATCAT
ACCTATTTCTCTGTTTCAGACATCAGTGAAGTTCGCGTTGAGGGATTGGA
GACACTGGATTACCTCGACAACTTGCAGAATAAGGAGCGTTTTTACTGA
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