CN181692
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181692 vs. ExPASy Swiss-Prot
Match: UTP7_YEAST (U3 small nucleolar RNA-associated protein 7 OS=Saccharomyces cerevisiae GN=UTP7 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.593e-20 Identity = 45/91 (49.45%), Postives = 68/91 (74.73%), Query Frame = -3 Query: 430 HNYSRYMGHSMVKGYQIGKVSFRPYEDVLGIGHSMGWSSILVPGSGEPNFDSWVANPFETSKQRREKEVRSLLDKLPPETIMLNPSKIGTV 702 H + YM H + G ++ + F P+ED+LG+GH G ++++VPG+GE N+D+ NPFET KQR+E+EVR+LL+KLP +TI L+P+ IG+V Sbjct: 363 HRNTPYMSH-LFAGNKVENLGFVPFEDLLGVGHQTGITNLIVPGAGEANYDALELNPFETKKQRQEQEVRTLLNKLPADTITLDPNSIGSV 452
BLAST of CN181692 vs. ExPASy Swiss-Prot
Match: UTP7_SCHPO (Probable U3 small nucleolar RNA-associated protein 7 OS=Schizosaccharomyces pombe GN=utp7 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.053e-20 Identity = 56/134 (41.79%), Postives = 77/134 (57.46%), Query Frame = -3 Query: 307 YMGHSMVKGYQIGKVSFRPYEDVLGIGHSMGWSSILVPGSGEPNFDSWVANPFETSKQRREKEVRSLLDKLPPETIMLNPSKIGTV-------REAKKKEKPTKQERXXXXXXXXXXVKGFVWKNKTKGRNKPS 687 YM H ++ + + + PYED+LGIGH+ G+ SI+VPGSGEPN+DS+ +PF + KQR+E EVR LL+KL PE I LN IG V R+A+ +E+ +E+ W K K R K S Sbjct: 343 YMNH-LLPSSSVVDLHYCPYEDILGIGHAKGFESIIVPGSGEPNYDSYENDPFASRKQRQETEVRQLLEKLRPEMISLNADFIGNVDRAAPSLRKAEAEEEKPPEEK---------------WVPKAKARGKNS 460
BLAST of CN181692 vs. ExPASy Swiss-Prot
Match: WDR46_MOUSE (WD repeat-containing protein 46 OS=Mus musculus GN=Wdr46 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.400e-18 Identity = 52/124 (41.94%), Postives = 75/124 (60.48%), Query Frame = -3 Query: 316 YMGHSMVKGYQIGKVSFRPYEDVLGIGHSMGWSSILVPGSGEPNFDSWVANPFETSKQRREKEVRSLLDKLPPETIMLNPSKIGTVREAKKKEKPTKQERXXXXXXXXXXVKGFVWKNKTKGRN 687 Y+ H + G+ G + F P+EDVLG+GHS G++S+LVPG+ EPNFD NP+ + KQR+E EV++LL+K+P E I LNP + V +++ K+ER F K K KGR+ Sbjct: 440 YLTHRL-SGHVHG-LQFCPFEDVLGVGHSGGFTSMLVPGAAEPNFDGLENNPYRSRKQRQEWEVKALLEKVPAELICLNPRALAEVDVVTLEQQ--KKERIERLGYDPDAKAAFQPKAKQKGRS 559
BLAST of CN181692 vs. ExPASy Swiss-Prot
Match: WDR46_CANFA (WD repeat-containing protein 46 OS=Canis familiaris GN=WDR46 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.823e-16 Identity = 51/124 (41.13%), Postives = 74/124 (59.68%), Query Frame = -3 Query: 316 YMGHSMVKGYQIGKVSFRPYEDVLGIGHSMGWSSILVPGSGEPNFDSWVANPFETSKQRREKEVRSLLDKLPPETIMLNPSKIGTVREAKKKEKPTKQERXXXXXXXXXXVKGFVWKNKTKGRN 687 Y+ H + G+ G + F P+EDVLG+GHS G +S+LVPG+ EPNFD NP+ + KQR+E EV++LL+K+P E I L+P + V +++ K+ER F K K KGR+ Sbjct: 442 YLTHRL-SGHVHG-LHFCPFEDVLGLGHSGGITSMLVPGAAEPNFDGLENNPYRSQKQRQEWEVKALLEKVPAELICLDPRALAEVDVISLEQE--KKERIERLGYDPEAKAPFQPKPKQKGRS 561
BLAST of CN181692 vs. ExPASy Swiss-Prot
Match: WDR46_HUMAN (WD repeat-containing protein 46 OS=Homo sapiens GN=WDR46 PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.380e-16 Identity = 46/110 (41.82%), Postives = 68/110 (61.82%), Query Frame = -3 Query: 316 VSFRPYEDVLGIGHSMGWSSILVPGSGEPNFDSWVANPFETSKQRREKEVRSLLDKLPPETIMLNPSKIGTVREAKKKEKPTKQERXXXXXXXXXXVKGFVWKNKTKGRN 645 + F P+EDVLG+GH+ G +S+LVPG+GEPNFD +NP+ + KQR+E EV++LL+K+P E I L+P + V ++ K+E+ F K K KGR+ Sbjct: 453 LQFCPFEDVLGVGHTGGITSMLVPGAGEPNFDGLESNPYRSRKQRQEWEVKALLEKVPAELICLDPRALAEVDVISLEQ--GKKEQIERLGYDPQAKAPFQPKPKQKGRS 560 The following BLAST results are available for this feature:
BLAST of CN181692 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181692 ID=CN181692; Name=CN181692; organism=Citrus sinensis; type=EST; length=719bpback to top |