CN181691

Overview
NameCN181691
Unique NameCN181691
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN181691 vs. ExPASy Swiss-Prot
Match: UTP7_YEAST (U3 small nucleolar RNA-associated protein 7 OS=Saccharomyces cerevisiae GN=UTP7 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.742e-14
Identity = 43/125 (34.40%), Postives = 69/125 (55.20%), Query Frame = 3 
Query:  360 EQEISNELDTNVKKYLRGEGANLEILKDKKLKGQLALREELYGKSAKAAAKVEKWLMPSEGGYLEAEG-VEKTWRIKQEAIAREVDILSSRNQYDIVLPELGPYTLDFTSSGRYMAAAGRKGHIA 731
            E+E  N+ + +   Y      N    KDKKL+  L   +E Y K+  +AA  + +L+P   GYLE E  +EKT++++Q  I   VD+ ++    D+ L E GPY + +  +G ++   GRKGH+A
Sbjct:   14 ERENQNKFERST--YTNNAKNNHTQTKDKKLRAGLKKIDEQYKKAVSSAAATD-YLLPESNGYLEPENELEKTFKVQQSEIKSSVDVSTANKALDLSLKEFGPYHIKYAKNGTHLLITGRKGHVA 135
[Close]
BLAST of CN181691 vs. ExPASy Swiss-Prot
Match: UTP7_SCHPO (Probable U3 small nucleolar RNA-associated protein 7 OS=Schizosaccharomyces pombe GN=utp7 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.805e-14
Identity = 41/118 (34.75%), Postives = 67/118 (56.78%), Query Frame = 3 
Query:  378 ELDTNVKKYLRGEGANLEILKDKKLKGQLALREELYGKSAKAAAKVEKWLMPSEGGYLEAEGVEKTWRIKQEAIAREVDILSSRNQYDIVLPELGPYTLDFTSSGRYMAAAGRKGHIA 731
            +++ + KKY RG   N + +KDKKL+  +   EE       + AK E  L     G LEAEG+E+T++ +Q+ +A  V + ++   + + L + G Y+ D+T  GR +   GRKGHI+
Sbjct:   10 DVNASTKKYSRGRKLNPKKIKDKKLRSNIQKIEERIENVESSLAKTEI-LHEDNPGLLEAEGLERTYKFRQDQLAPNVALETATKSFSLDLDKFGGYSFDYTRDGRMILLGGRKGHIS 126
The following BLAST results are available for this feature:
BLAST of CN181691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
UTP7_YEAST6.742e-1434.40U3 small nucleolar RNA-associated protein 7 OS=Sac... [more]
UTP7_SCHPO8.805e-1434.75Probable U3 small nucleolar RNA-associated protein... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0001F11_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181691 ID=CN181691; Name=CN181691; organism=Citrus sinensis; type=EST; length=736bp
CTTTGCTCGTTAAAAGGGCGAAAAAAAAAAAAACTAAAACCCTAGAGCTC
GGTTCTCCTCTCCTTCTTCTTCTCTCTGAAATTTGGAACTCGTCGTCGCC
GCCGCCGTTTGAAGCTCGCCGCGGCTGGAAGCTAGGCCCCATCACCGTGT
TACTGTTGCTGCACTAAGATCTTCGCTGCACGTAGCTCACCTAGTCTCCG
CTGCACGGCTGCACTGCATCTCCGTTAACTCTCTAAACGGTGCTTGTTGA
TTGCTGATTGGTGTCGGTTTTGCTGGCCTGGGCATCTGTTGAAGATTGCA
CGTCTGGGATGGGTGCGAAAGAAGAGAACGGAGATGGTGGAGGTATTTGG
CCTCCTATTGAACAGGAGATCTCCAACGAATTAGATACAAACGTGAAGAA
ATATCTCAGAGGAGAGGGTGCTAATTTGGAGATTTTAAAAGACAAAAAAT
TGAAGGGTCAACTTGCTCTCAGAGAAGAATTATATGGAAAATCTGCGAAA
GCTGCTGCCAAAGTTGAGAAGTGGCTTATGCCAAGTGAGGGAGGCTATTT
GGAGGCAGAAGGTGTAGAAAAGACATGGCGGATCAAACAAGAAGCAATTG
CTCGGGAAGTAGATATCCTAAGCTCCAGAAATCAATATGATATCGTGTTA
CCGGAACTTGGTCCATATACTCTGGATTTTACATCAAGTGGTCGCTATAT
GGCAGCTGCTGGACGCAAGGGGCACATAGCTGTTGT
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