CN181687

Overview
NameCN181687
Unique NameCN181687
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181687 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.407e-33
Identity = 66/154 (42.86%), Postives = 103/154 (66.88%), Query Frame = -1
Query:  219 LFGGEEIGACLRVNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPMKEFVTRNRPALYPPMTYDEYRLYIRTKGPCGKAQVESL 680
            LF   +    +R+N+YP CPQPD  +GL+PHSD  G+T+L+   +V GLQ+++   W+ VKP+PNAFIVNIGD +++++N  Y+S+EHR +VNSEK+R+S+A F+N      + P K  V R + A +  +T  EY   + ++   GKA +++L
Sbjct:  203 LFDDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVEGLQIKKDGKWVPVKPLPNAFIVNIGDVLEIITNGTYRSIEHRGVVNSEKERLSIATFHNVGMYKEVGPAKSLVERQKVARFKRLTMKEYNDGLFSRTLDGKAYLDAL 356          
BLAST of CN181687 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.699e-30
Identity = 61/138 (44.20%), Postives = 90/138 (65.22%), Query Frame = -1
Query:  273 KMLFGGEEIGACLRVNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPMKEFVTRNRPALYPPMTYDEY 686
            K   GG+++   L++N+YP CP+PDL LG+  H+D   +T+L+P+E V GLQV + D+W  VK +PNA I++IGDQI+++SN  YKSV HR  VN +K R+S   F  P  +LL  P+ + +T   PA +    Y +Y
Sbjct:  191 KKASGGDDLIYMLKINYYPPCPRPDLALGVVAHTDMSAITILVPNE-VQGLQVHKDDHWYDVKYIPNALIIHIGDQIEIMSNGKYKSVYHRTTVNKDKTRMSWPVFLEPPPELLTGPISKLITDENPAKFKTKKYKDY 327          
BLAST of CN181687 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.525e-30
Identity = 65/160 (40.62%), Postives = 99/160 (61.88%), Query Frame = -1
Query:  219 KMLFGGEEIGACLRVNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPMKEFVTRN---RPALYPPMTYDEY-RLYIRTKGPCGKAQVESL 686
            K  +G +      +V+ YP CP+PDL  GL  H+D GG+ LL  D+ V+GLQ+ + D WI V P+ ++ ++N+GDQ++V++N  YKSV HRVI  ++  R+SLA FYNP SD +I P    V R+      +YP   +D+Y +LY R K    + + E++
Sbjct:  145 KAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVPHRVIAQTDGTRMSLASFYNPASDAVIYPAPALVERDAEENKQIYPKFVFDDYMKLYARLKFQAKEPRFEAM 304          
BLAST of CN181687 vs. ExPASy Swiss-Prot
Match: FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.090e-29
Identity = 58/134 (43.28%), Postives = 87/134 (64.93%), Query Frame = -1
Query:  273 GGEEIGACLRVNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPMKEFVTRNRPALYPPMTYDEY 674
            GG++I   L++N+YP CP+PDL LG+  H+D   +T+L+P+E V GLQV + D WI  K +PNA +++IGDQI++LSN  YK+V HR  VN +K R+S   F  P +D ++ P+ + V    P  Y    + +Y
Sbjct:  193 GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDY 325          
BLAST of CN181687 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.648e-29
Identity = 64/125 (51.20%), Postives = 84/125 (67.20%), Query Frame = -1
Query:  276 VNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRRGDN--WITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPMKEFVTRNRPALYPPMTYDE 644
            VNFYPKCPQPDLTLGL  H+DPG +TLLL D+ V GLQ  R D   WITV+PV  AF+VN+GD   +LSN  +K+ +H+ +VNS   R+S+A F NP  + ++ P+       +P L  P+TY E
Sbjct:  200 VNFYPKCPQPDLTLGLKRHTDPGTITLLLQDQ-VGGLQATRDDGKTWITVQPVEGAFVVNLGDHGHLLSNGRFKNADHQAVVNSNSSRLSIATFQNPAQEAIVYPL-SVREGEKPILEAPITYTE 322          
BLAST of CN181687 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.683e-29
Identity = 61/157 (38.85%), Postives = 101/157 (64.33%), Query Frame = -1
Query:  192 RVNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPMKEFVTR----NRPALYPPMTYDEY-RLYIRTKGPCGKAQVESLTSSP*VLNT 647
            +V+ YP CP+P+L  GL  H+D GG+ LL  D+ V+GLQ+ + + WI V P+ ++ +VNIGDQ++V++N  YKSV HRV+  +  +R+S+A FYNP SD +I P  E V +     +   YP   +++Y +LY+R K    + + E++ +   V+++
Sbjct:  156 KVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDTVSGLQLLKDEEWIDVPPMRHSIVVNIGDQLEVITNGKYKSVMHRVVAQTNGNRMSIASFYNPGSDAVIFPAPELVEKEAAEKKKETYPKFVFEDYMKLYVRQKFEAKEPRFEAMKTMDAVISS 312          
BLAST of CN181687 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.134e-28
Identity = 59/147 (40.14%), Postives = 94/147 (63.95%), Query Frame = -1
Query:  213 RVNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPMKEFVTRNRPAL-YPPMTYDEY-RLYIRTKGPCGKAQVESLTS 647
            +V+ YP CP+PDL  GL  H+D GG+ LL  D++V GLQ+ +   W+ V P+ ++ +VN+GDQ++V++N  YKSV HRV+  ++ +R+S+A FYNP SD +I P    V      + YP   +++Y +LY+R K    + + E+  S
Sbjct:  164 KVSSYPPCPRPDLVKGLRAHTDAGGIILLFQDDSVGGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVITNGRYKSVMHRVVAQTDGNRMSIASFYNPGSDAVISPAPALVKEEEAVVAYPKFVFEDYMKLYVRHKFEAKEPRFEAFKS 310          
BLAST of CN181687 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.481e-28
Identity = 62/164 (37.80%), Postives = 103/164 (62.80%), Query Frame = -1
Query:  213 KMLFGGEEIGACLRVNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPMKEFVTRNRPA-LYPPMTYDEY-RLYI----RTKGPCGKAQVESLTS 686
            K  +G +      +V+ YP CP+P+L  GL  H+D GG+ LL  D+ V+GLQ+ + D WI V P+ ++ ++N+GDQ++V++N  YKSV HRVI  ++  R+S+A FYNP  D +I P    +  N  + +YP   +D+Y +LY+    + K P  +A +++++S
Sbjct:  145 KAFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVMHRVIAQTDGARMSIASFYNPGDDAVISPASTLLKENETSEVYPKFVFDDYMKLYMGLKFQAKEPRFEAMMKAMSS 308          
BLAST of CN181687 vs. ExPASy Swiss-Prot
Match: FL3H_CALCH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.526e-28
Identity = 63/125 (50.40%), Postives = 85/125 (68.00%), Query Frame = -1
Query:  276 VNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRR--GDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPMKEFVTRNRPALYPPMTYDE 644
            VN+YPKCPQPDLTLGL  H+DPG +TLLL D+ V GLQ  R  G++WITVKPV  AF+VN+GD    LSN  +K+ +H+ +VNS   R+S+A F NP  + ++ P+K      +  +  PMT+ E
Sbjct:  197 VNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQ-VGGLQATRDGGESWITVKPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSSTSRLSIATFQNPAPEAIVYPLK-INEGEKSIMEEPMTFME 319          
BLAST of CN181687 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.526e-28
Identity = 64/158 (40.51%), Postives = 98/158 (62.03%), Query Frame = -1
Query:  192 RVNFYPKCPQPDLTLGLSPHSDPGGMTLLLPDENVAGLQVRRGDNWITVKPVPNAFIVNIGDQIQVLSNAIYKSVEHRVIVNSEKDRVSLAFFYNPKSDLLIEPM-----KEFVTRNRPALYPPMTYDEY-RLYIRTKGPCGKAQVESLTSSP*VLNT 647
            +V+ YP CP+PDL  GL  H+D GG+ LL  D+ V+GLQ+ +   WI V P+  + +VNIGDQ++V++N  YKSV HRV+  ++ +R+S+A FYNP SD +I P      KE     +  +YP   + +Y  LYIR K    + + E++ S   V+++
Sbjct:  162 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDREWIEVPPLRYSIVVNIGDQLEVITNGKYKSVLHRVVAQTDGNRMSIASFYNPGSDAVIFPAPALVEKEAEEEEKKEIYPKFVFQDYMNLYIRKKFEAKEPRFEAMKSMEIVMSS 319          
The following BLAST results are available for this feature:
BLAST of CN181687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
SRG1_ARATH3.407e-3342.86Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
FLS_PETCR2.699e-3044.20Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]
ACCO4_PETHY3.525e-3040.631-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
FLS_CITUN5.090e-2943.28Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]
FL3H_MALDO6.648e-2951.20Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]
ACCO_DENCR8.683e-2938.851-aminocyclopropane-1-carboxylate oxidase OS=Dendr... [more]
ACCO1_ORYSI1.134e-2840.141-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO_PEA1.481e-2837.801-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
FL3H_CALCH2.526e-2850.40Naringenin,2-oxoglutarate 3-dioxygenase OS=Callist... [more]
ACCO2_DORSP2.526e-2840.511-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001F09_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181687 ID=CN181687; Name=CN181687; organism=Citrus sinensis; type=EST; length=689bp
TTTTTTTTTTTTTTTTTCATATGAGCAAGAAGCTCCACCACACAACATCC
CTTTGATTTATTTTGTTTCCTAAATGATACAGGCAGCTCCTCATTGTAGA
TCAAAAGCAAGAGACGAATCGAAAGTTTCCATGATCAATTGATTCATATG
GATTTAGAAGCTAATAATTTATTTAAAAAGGACAGTTTACATGTATTTAG
AACCTATGGGCTTGATGTTAAGGATTCGACTTGTGCCTTGCCACAGGGAC
CCTTTGTCCGAATGTAAAGTCTATACTCATCATAAGTCATTGGTGGATAC
AAGGCTGGTCTGTTCCTTGTAACAAATTCCTTCATTGGTTCAATGAGCAA
ATCACTCTTAGGGTTGTAGAAGAAAGCTAGTGAGACTCTGTCTTTCTCTG
AATTCACAATCACTCGATGCTCCACGCTCTTGTAAATTGCGTTGCTTAGC
ACCTGAATTTGATCTCCGATGTTAACAATAAAAGCATTCGGGACAGGCTT
AACGGTGATCCAGTTATCGCCCCTACGGACTTGGAGTCCGGCGACGTTTT
CATCGGGCAGGAGAAGGGTCATGCCACCGGGGTCTGAGTGTGGGGAGAGG
CCCAGTGTAAGGTCCGGCTGGGGACATTTTGGGTAAAAATTAACCCTCAA
GCAAGCACCAATTTCCTCTCCACCGAAAAGCATTTTGAA
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