CN181684

Overview
NameCN181684
Unique NameCN181684
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length645
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181684 vs. ExPASy Swiss-Prot
Match: THS3_VITVI (Stilbene synthase 3 (Fragment) OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 8.457e-36
Identity = 77/184 (41.85%), Postives = 115/184 (62.50%), Query Frame = 3
Query:   96 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDES-IKEKLERLCKTTTVKTRYTVMSKAILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSEIRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETTILGF 644
            G AT+LAIG A P   + Q    + Y R TK E  S +K+K  R+C  + +K RY  +++ +L+++P +    + ++  R EI    V ++  EA+L  +KEWG+P   ITH+V+ ++S + +PG D  L++ LGL + V RVMLY  GCY G T LR AKD+AENN G+RVL+  SE T++ F
Sbjct:   12 GPATILAIGTATPDHCVYQSDYADYYFRVTKSEPMSELKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLETSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTF 195          
BLAST of CN181684 vs. ExPASy Swiss-Prot
Match: THS4_VITVI (Stilbene synthase 4 OS=Vitis vinifera GN=GSVIVT00005194001 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.461e-35
Identity = 77/184 (41.85%), Postives = 114/184 (61.96%), Query Frame = 3
Query:   96 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDES-IKEKLERLCKTTTVKTRYTVMSKAILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSEIRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETTILGF 644
            G ATVLAIG A P   + Q    + Y R TK E  + +K+K  R+C  + +K RY  +++ +L+++P +    + ++  R EI    V ++  EA+L  +KEWG+P   ITH+V+ ++S + +PG D  L++ LGL   V RVMLY  GCY G T LR AKD+AENN G+RVL+  SE T++ F
Sbjct:   15 GPATVLAIGTATPDNCLYQSDFADYYFRVTKSEHMTELKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTF 198          
BLAST of CN181684 vs. ExPASy Swiss-Prot
Match: THS2_VITVI (Stilbene synthase 2 OS=Vitis vinifera GN=GSVIVT00004047001 PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 2.461e-35
Identity = 76/184 (41.30%), Postives = 114/184 (61.96%), Query Frame = 3
Query:   96 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCED-ESIKEKLERLCKTTTVKTRYTVMSKAILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSEIRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETTILGF 644
            G AT+LAIG A P   + Q    + Y R TK E   ++K+K  R+C  + +K RY  +++ +L+++P +    + ++  R EI    V ++  EA+L  +KEWG+P   ITH+V+ ++S + +PG D  L++ LGL   V RVMLY  GCY G T LR AKD+AENN G+RVL+  SE T++ F
Sbjct:   15 GPATILAIGTATPDHCVYQSDYADYYFRVTKSEHMTALKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTF 198          
BLAST of CN181684 vs. ExPASy Swiss-Prot
Match: THS5_VITVI (Stilbene synthase 5 OS=Vitis vinifera GN=GSVIVT00007357001 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.197e-35
Identity = 75/184 (40.76%), Postives = 115/184 (62.50%), Query Frame = 3
Query:   96 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDES-IKEKLERLCKTTTVKTRYTVMSKAILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSEIRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETTILGF 644
            G AT+LAIG A P   + Q    + Y + TK E  + +K+K  R+C  + +K RY  +++ +L+++P +    + ++  R EI    V ++  EA+L  +KEWG+P   ITH+V+ ++S + +PG D  L++ LGL + V RVMLY  GCY G T LR AKD+AENN G+RVL+  SE T++ F
Sbjct:   15 GPATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTELKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLETSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTF 198          
BLAST of CN181684 vs. ExPASy Swiss-Prot
Match: THS7_VITVI (Stilbene synthase 6 OS=Vitis vinifera GN=STS PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.482e-35
Identity = 75/184 (40.76%), Postives = 114/184 (61.96%), Query Frame = 3
Query:   96 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDES-IKEKLERLCKTTTVKTRYTVMSKAILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSEIRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETTILGF 644
            G AT+LAIG A P   + Q    + Y R TK E  + +K+K  R+C  + +K RY  +++ +L+++P +    + ++  R EI    V  +  +A+L  +KEWG+P   ITH+V+ ++S + +PG D  L++ LGL + V RVMLY  GCY G T LR AKD+AENN G+RVL+  SE T++ F
Sbjct:   15 GPATILAIGTATPDHCVYQSDYADYYFRVTKSEHMTELKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPRLGRDAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLETSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTF 198          
BLAST of CN181684 vs. ExPASy Swiss-Prot
Match: THS1_VITVI (Stilbene synthase 1 OS=Vitis vinifera GN=VINST1 PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 5.482e-35
Identity = 75/184 (40.76%), Postives = 114/184 (61.96%), Query Frame = 3
Query:   96 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDES-IKEKLERLCKTTTVKTRYTVMSKAILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSEIRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETTILGF 644
            G AT+LAIG A P   + Q    + Y R TK E  + +K+K  R+C  + +K RY  +++ +L+++P +    + ++  R EI    V  +  +A+L  +KEWG+P   ITH+V+ ++S + +PG D  L++ LGL + V RVMLY  GCY G T LR AKD+AENN G+RVL+  SE T++ F
Sbjct:   15 GPATILAIGTATPDHCVYQSDYADYYFRVTKSEHMTELKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPRLGRDAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLETSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTF 198          
BLAST of CN181684 vs. ExPASy Swiss-Prot
Match: CHS9_DAUCA (Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.221e-34
Identity = 75/184 (40.76%), Postives = 112/184 (60.87%), Query Frame = 3
Query:   96 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDE-SIKEKLERLCKTTTVKTRYTVMSKAILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSEIRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETTILGF 644
            G ATVLAIG A P   + Q    + Y R T  ED+  +KEK  R+C+ + + TRY  +++ +L + P      ++++  R +I    V ++  EA+L  IKEWGRP   ITH+++ ++S + +PG D  L+  LGLR  V R M+Y  GC+ G T LR+AKD+AENN  +RVL+  SE T++ F
Sbjct:   15 GPATVLAIGTATPPNCVDQSAYADYYFRITNSEDKPELKEKFRRMCEKSMINTRYMHLTEDLLKQNPSFCEYMASSLDARQDIVVNEVPKLGKEAALRAIKEWGRPKSKITHLIFCTTSGVDMPGADFRLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKNARVLVVCSEITVITF 198          
BLAST of CN181684 vs. ExPASy Swiss-Prot
Match: CHS1_DAUCA (Chalcone synthase 1 OS=Daucus carota GN=CHS1 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.553e-34
Identity = 74/184 (40.22%), Postives = 112/184 (60.87%), Query Frame = 3
Query:   96 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDE-SIKEKLERLCKTTTVKTRYTVMSKAILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSEIRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETTILGF 644
            G ATVLAIG A P   + Q    + Y R T  ED+  +KEK  R+C+ + + TRY  +++ +L + P      ++++  R +I    V ++  EA+L  IKEWG+P   ITH+++ ++S + +PG D  L+  LGLR  V R M+Y  GC+ G T LR+AKD+AENN  +RVL+  SE T++ F
Sbjct:   15 GPATVLAIGTATPPNCVDQSAYADYYFRITNSEDKPELKEKFRRMCEKSMINTRYMHLTEDLLKQNPSFCEYMASSLDARQDIVVNEVPKLGKEAALRAIKEWGQPKSKITHLIFCTTSGVDMPGADFRLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKNARVLVVCSEITVITF 198          
BLAST of CN181684 vs. ExPASy Swiss-Prot
Match: CHSJ_PETHY (Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 6.061e-34
Identity = 75/184 (40.76%), Postives = 114/184 (61.96%), Query Frame = 3
Query:   96 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDES-IKEKLERLCKTTTVKTRYTVMSKAILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSEIRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETTILGF 644
            G AT++AIG A PS  + Q    + Y R T  E ++ +KEK +R+C  + +K RY  +++ IL + P +    + ++  R +I    V ++  EA+   IKEWG+P   ITH+V+ ++S + +PG D  L+  LGLRS V R+M+Y  GC+ G T LR+AKD+AENN G+RVL+  SE T + F
Sbjct:   15 GPATIMAIGTATPSNCVDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYMHLTEEILKENPNICEYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTF 198          
BLAST of CN181684 vs. ExPASy Swiss-Prot
Match: VPS_HUMLU (Phloroisovalerophenone synthase OS=Humulus lupulus GN=VPS PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 7.916e-34
Identity = 76/180 (42.22%), Postives = 110/180 (61.11%), Query Frame = 3
Query:   96 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDES-IKEKLERLCKTTTVKTRYTVMSKAILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSEIRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 632
            G AT+LAIG A P+    Q    + Y R TK E  + +K+K +R+C+ +T+K RY  +++  L + P L    + ++  R ++    V ++  EA++  IKEWG+P   ITH+++ + S I +PG D   +  LGLR  V RVMLY LGCY G   LR+AKDIAENN G+RVL+  SE T
Sbjct:   17 GPATILAIGTAVPANCFNQADFPDYYFRVTKSEHMTDLKKKFQRMCEKSTIKKRYLHLTEEHLKQNPHLCEYNAPSLNTRQDMLVVEVPKLGKEAAINAIKEWGQPKSKITHLIFCTGSSIDMPGADYQCAKLLGLRPSVKRVMLYQLGCYAGGKVLRIAKDIAENNKGARVLIVCSEIT 196          
The following BLAST results are available for this feature:
BLAST of CN181684 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
THS3_VITVI8.457e-3641.85Stilbene synthase 3 (Fragment) OS=Vitis vinifera P... [more]
THS4_VITVI2.461e-3541.85Stilbene synthase 4 OS=Vitis vinifera GN=GSVIVT000... [more]
THS2_VITVI2.461e-3541.30Stilbene synthase 2 OS=Vitis vinifera GN=GSVIVT000... [more]
THS5_VITVI4.197e-3540.76Stilbene synthase 5 OS=Vitis vinifera GN=GSVIVT000... [more]
THS7_VITVI5.482e-3540.76Stilbene synthase 6 OS=Vitis vinifera GN=STS PE=2 ... [more]
THS1_VITVI5.482e-3540.76Stilbene synthase 1 OS=Vitis vinifera GN=VINST1 PE... [more]
CHS9_DAUCA1.221e-3440.76Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 ... [more]
CHS1_DAUCA3.553e-3440.22Chalcone synthase 1 OS=Daucus carota GN=CHS1 PE=2 ... [more]
CHSJ_PETHY6.061e-3440.76Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=... [more]
VPS_HUMLU7.916e-3442.22Phloroisovalerophenone synthase OS=Humulus lupulus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001F07_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181684 ID=CN181684; Name=CN181684; organism=Citrus sinensis; type=EST; length=645bp
GCTTGTCTTCCGGCCCCGACTTCAAGATGTCACAAATTAACGGCAGTGGC
AGCGACGGGCACCATTCTGCTTCAGCTAGGCGGACTCCCACTCCCGGAAA
GGCAACTGTTCTTGCTATTGGCAAGGCCTTCCCTAGTCAGCTCATTCCTC
AGGAATGCTTGGTTGAGGGCTACCTTCGGGACACTAAATGTGAAGATGAG
TCCATCAAGGAGAAACTTGAACGCCTGTGTAAAACCACTACTGTGAAGAC
AAGATACACCGTCATGTCCAAGGCGATCCTGGACAAATATCCTGAACTGA
CAACCGAGGGCTCAGCAACCATCAAACAAAGACTTGAAATAGCAAACCCA
GCAGTGGTAGAGATGGCCTTGGAAGCAAGCCTTGCTTGCATTAAGGAATG
GGGGAGGCCTGCGGAAGACATCACTCACATTGTCTATGTTTCATCCAGTG
AGATTCGTCTACCCGGTGGCGATCTCTACCTCTCCAGCAAGCTTGGCCTT
AGGAGTGATGTTGGCCGAGTAATGCTTTACTTTCTGGGCTGTTATGGCGG
TGTCACTGGCCTCCGTGTTGCTAAAGACATAGCTGAAAACAACCCTGGAA
GCCGCGTTTTGCTTACCACTTCTGAAACTACCATACTTGGGTTTC
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