CN181677

Overview
NameCN181677
Unique NameCN181677
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length567
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig567 contig Csv1_Contig567:116..681. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181677 vs. ExPASy Swiss-Prot
Match: CYTI_VIGUN (Cysteine proteinase inhibitor OS=Vigna unguiculata PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.331e-23
Identity = 52/92 (56.52%), Postives = 65/92 (70.65%), Query Frame = 2
Query:   20 VGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQS 295
            +GG R+V    N+ EI +LARFAV+EHNKKQN+ L+F            GTLY ITLEA +GGQKK++EAKVWEKPW+ FKEL+EF  V  +
Sbjct:    4 LGGNRDVAGNQNSLEIDSLARFAVEEHNKKQNALLEFGRVVSAQQQVVSGTLYTITLEAKDGGQKKVYEAKVWEKPWLNFKELQEFKHVGDA 95          
BLAST of CN181677 vs. ExPASy Swiss-Prot
Match: CYT6_ARATH (Cysteine proteinase inhibitor 6 OS=Arabidopsis thaliana GN=CYS6 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 4.104e-22
Identity = 50/97 (51.55%), Postives = 67/97 (69.07%), Query Frame = 2
Query:   20 VGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSSTA 310
            VGGV +V A  N+ E+ +LARFAVDEHNKK+N+ L+F            GTL+ +TLE +E GQKKL+EAKVW KPW+ FKEL+EF   + + + T+
Sbjct:   37 VGGVGDVPANQNSGEVESLARFAVDEHNKKENALLEFARVVKAKEQVVAGTLHHLTLEILEAGQKKLYEAKVWVKPWLNFKELQEFKPASDAPAITS 133          
BLAST of CN181677 vs. ExPASy Swiss-Prot
Match: CYT12_ORYSJ (Cysteine proteinase inhibitor 12 OS=Oryza sativa subsp. japonica GN=Os01g0270100 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.118e-19
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = 2
Query:   20 VGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSST 307
            +GG  +  + AN+ E   LARFAVDEHNK++N+ L+F            GTL+ +TLEA+E G+KK++EAKVW KPW+ FKEL+EF     + + T
Sbjct:   48 LGGAHDAPSAANSVETDALARFAVDEHNKRENALLEFVRVVEAKEQVVAGTLHHLTLEALEAGRKKVYEAKVWVKPWLDFKELQEFRNTGDATTFT 143          
BLAST of CN181677 vs. ExPASy Swiss-Prot
Match: CYT3_ARATH (Cysteine proteinase inhibitor 3 OS=Arabidopsis thaliana GN=CYS3 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 2.490e-19
Identity = 46/90 (51.11%), Postives = 58/90 (64.44%), Query Frame = 2
Query:    8 KNGYVGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEF 277
            K   +GGV ++    N+ EI +LARFA+ EHNK+QN  L+F            GT+Y +TLEA EG Q K FEAKVW KPWM FK+L+EF
Sbjct:   31 KTMMLGGVHDLRGNQNSGEIESLARFAIQEHNKQQNKILEFKKIVKAREQVVAGTMYHLTLEAKEGDQTKNFEAKVWVKPWMNFKQLQEF 120          
BLAST of CN181677 vs. ExPASy Swiss-Prot
Match: CYT1_ORYSJ (Cysteine proteinase inhibitor 1 OS=Oryza sativa subsp. japonica GN=Os01g0803200 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 4.247e-19
Identity = 50/92 (54.35%), Postives = 58/92 (63.04%), Query Frame = 2
Query:   20 VGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQS 295
            +GGV  V    N+  +V+LARFAV EHNKK NS L+F            GTLY  T+E  EG  KKL+EAKVWEKPWM FKEL+EF  V  S
Sbjct:   47 LGGVEPV-GNENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPWMDFKELQEFKPVDAS 137          
BLAST of CN181677 vs. ExPASy Swiss-Prot
Match: CYT1_MAIZE (Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.595e-18
Identity = 43/94 (45.74%), Postives = 61/94 (64.89%), Query Frame = 2
Query:   23 GGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQSHSS 304
            GG+++V A  N+ ++  LARFAV+EHN+K N+ L F            GT+Y +T+E  +G  KKL+EAKVWEKPW  FK+L+EF  V +  S+
Sbjct:   42 GGIKDVPANENDLQLQELARFAVNEHNQKANALLGFEKLVKAKTQVVAGTMYYLTIEVKDGEVKKLYEAKVWEKPWENFKQLQEFKPVEEGASA 135          
BLAST of CN181677 vs. ExPASy Swiss-Prot
Match: CYTA_HELAN (Cysteine proteinase inhibitor A OS=Helianthus annuus PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.191e-17
Identity = 44/75 (58.67%), Postives = 49/75 (65.33%), Query Frame = 2
Query:   62 EIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTV 286
            EI  LARFAVDEHNKKQN+ L+F            G +Y ITLEA  GG KK +EAKVW KPW  FKEL+EF  V
Sbjct:    3 EIDELARFAVDEHNKKQNALLEFGKVVNTKEQVVAGKMYYITLEATNGGVKKTYEAKVWVKPWENFKELQEFKPV 77          
BLAST of CN181677 vs. ExPASy Swiss-Prot
Match: CYT1_ARATH (Cysteine proteinase inhibitor 1 OS=Arabidopsis thaliana GN=CYS1 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 3.365e-16
Identity = 38/87 (43.68%), Postives = 57/87 (65.52%), Query Frame = 2
Query:   20 VGGVREVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFN 280
            VGGVR+++A AN+ ++ +LARFAVDEHNK +N  L++            GT++ +T+E  +G   K++EAKV EK W   K+L+ FN
Sbjct:   10 VGGVRDIDANANDLQVESLARFAVDEHNKNENLTLEYKRLLGAKTQVVAGTMHHLTVEVADGETNKVYEAKVLEKAWENLKQLESFN 96          
BLAST of CN181677 vs. ExPASy Swiss-Prot
Match: CYT1_HORVU (Cysteine proteinase inhibitor OS=Hordeum vulgare GN=ICY PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.848e-15
Identity = 42/91 (46.15%), Postives = 54/91 (59.34%), Query Frame = 2
Query:   20 VGGVREVEATANNQ-EIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVA 289
            +GGV++  A   N  E + LARFAV EHN K N+ L+F            G ++  T+E  EGG KKL+EAKVWEK W  FK+L+EF   A
Sbjct:   17 LGGVQDAPAGRENDLETIELARFAVAEHNAKANALLEFEKLVKVRQQVVAGCMHYFTIEVKEGGAKKLYEAKVWEKAWENFKQLQEFKPAA 107          
BLAST of CN181677 vs. ExPASy Swiss-Prot
Match: CYT7_ARATH (Cysteine proteinase inhibitor 7 OS=Arabidopsis thaliana GN=CYS7 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 3.720e-15
Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = 2
Query:   59 QEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNTVAQS 295
            +EI ++A FAV EHN+++N+ L+             G LY +TLE +E G+KK++EAKVW KPWM FK+L+EF  +  S
Sbjct:   59 KEIDDIALFAVQEHNRRENAVLELARVLKATEQVVAGKLYRLTLEVIEAGEKKIYEAKVWVKPWMNFKQLQEFKNIIPS 137          
The following BLAST results are available for this feature:
BLAST of CN181677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CYTI_VIGUN6.331e-2356.52Cysteine proteinase inhibitor OS=Vigna unguiculata... [more]
CYT6_ARATH4.104e-2251.55Cysteine proteinase inhibitor 6 OS=Arabidopsis tha... [more]
CYT12_ORYSJ1.118e-1946.88Cysteine proteinase inhibitor 12 OS=Oryza sativa s... [more]
CYT3_ARATH2.490e-1951.11Cysteine proteinase inhibitor 3 OS=Arabidopsis tha... [more]
CYT1_ORYSJ4.247e-1954.35Cysteine proteinase inhibitor 1 OS=Oryza sativa su... [more]
CYT1_MAIZE3.595e-1845.74Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1[more]
CYTA_HELAN5.191e-1758.67Cysteine proteinase inhibitor A OS=Helianthus annu... [more]
CYT1_ARATH3.365e-1643.68Cysteine proteinase inhibitor 1 OS=Arabidopsis tha... [more]
CYT1_HORVU2.848e-1546.15Cysteine proteinase inhibitor OS=Hordeum vulgare G... [more]
CYT7_ARATH3.720e-1545.57Cysteine proteinase inhibitor 7 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001F04_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181677 ID=CN181677; Name=CN181677; organism=Citrus sinensis; type=EST; length=567bp
CTTACCGAAAAATGGCTACGTAGGCGGTGTTCGTGAGGTTGAAGCAACAG
CCAACAATCAGGAGATCGTTAATCTCGCACGCTTCGCTGTGGATGAGCAT
AACAAGAAGCAGAATTCAAATCTGCAATTTGTAAAAGTTGTAAGTGCGAA
GCAGCAAGTGGTTTCAGGGACTCTGTACGACATCACCTTGGAGGCTGTTG
AAGGAGGTCAGAAGAAACTTTTTGAAGCTAAGGTCTGGGAGAAGCCTTGG
ATGCAATTCAAGGAGTTGAAAGAATTCAATACTGTGGCTCAGTCTCACTC
CTCAACCGCTTAGCTTGTGGTGACTGAAGATGACATCTACGTGTAGCTTG
CAATGGATCAAACAAAGAGACAGTATCAATAAGAATGGAGCTATAACCAT
GTTCAGAATATAAAAATAAATGTAACCGGATTTATGAGTTTGGTTCTTTA
ATCTTTTGCAAGTTATGTGTCGATTATTTATGGTAGTAGCTGCAACTCAG
CGCAACTTTTATAACTGTGTGAAAAATAATTGAAATGACCTTTGGTCTGT
AATATATATACAAGCCT
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