CN188671

Overview
NameCN188671
Unique NameCN188671
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1117 contig Csv1_Contig1117:290..921. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188671 vs. ExPASy Swiss-Prot
Match: GSTF3_ARATH (Glutathione S-transferase ERD13 OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3)

HSP 1 Score: 208.764 bits (530), Expect = 1.925e-53
Identity = 96/150 (64.00%), Postives = 124/150 (82.67%), Query Frame = -2
Query:  179 DGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDDQSVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSPIPFTHYLVGPMGRQHMIRARKHVSAWWDDISTRPPWKKV 628
            DGD+ ++ESRAIMRY AEKYRSQG +LLGKTIEERG VEQWL+VEA +Y+P +  LT+ ++F+   G P D++ +KES+EKL + LDVYE +LSK++YLAGDF SLADL+ +PFT YLVGP+G+ H+I+ RKHVSAWWD IS+R  WK+V
Sbjct:   58 DGDYKIFESRAIMRYIAEKYRSQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLALTLNIVFAPLMGFPADEKVIKESEEKLAEVLDVYEAQLSKNEYLAGDFVSLADLAHLPFTEYLVGPIGKAHLIKDRKHVSAWWDKISSRAAWKEV 207          
BLAST of CN188671 vs. ExPASy Swiss-Prot
Match: GSTF7_ARATH (Glutathione S-transferase OS=Arabidopsis thaliana GN=At3g03190 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 4.764e-36
Identity = 71/154 (46.10%), Postives = 103/154 (66.88%), Query Frame = -2
Query:  170 QDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDDQSVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSPIPFTHYLVGPMGRQHMIRARKHVSAWWDDISTRPPWKKVLEL 631
            +DG   L+ESRAI RYYA KY  QGT+LLGKT+E R +V+QW+EVE + +      L + ++F  K G+P D   V+E   K  K LDVYE RL+ ++YL GD F+LADLS +P   Y++       ++ +R++++ WW++IS RP WKK++EL
Sbjct:   58 EDGYLKLFESRAIARYYATKYADQGTDLLGKTLEGRAIVDQWVEVENNYFYAVALPLVMNVVFKPKSGKPCDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLSHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLMEL 211          
BLAST of CN188671 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 9.297e-32
Identity = 67/153 (43.79%), Postives = 94/153 (61.44%), Query Frame = -2
Query:  173 QDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDDQSVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSPIPFTHYLVGPMGRQHMIRARKHVSAWWDDISTRPPWKKVLE 631
            +DGD  L+ESRAI +Y A  Y  +G +LL    ++  ++  W+EVE+  ++P   +LT +++     G   DD +V E++EKLGK LDVYE RL  SKYL GD F+LADL   P  +YL+G   +  +  +R HVSAW  DI  RP W K +E
Sbjct:   58 EDGDLKLFESRAITQYIAHTYADKGNQLLANDPKKMAIMSVWMEVESQKFDPVASKLTFEIVIKPMLGMVTDDAAVAENEEKLGKVLDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMGTKVKS-LFDSRPHVSAWCADILARPAWSKAIE 209          
BLAST of CN188671 vs. ExPASy Swiss-Prot
Match: GSTF6_ARATH (Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 7.366e-29
Identity = 66/157 (42.04%), Postives = 97/157 (61.78%), Query Frame = -2
Query:  164 QDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEE-RGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDDQSVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSPIPFTHYLVGPMGRQHMIRARKHVSAWWDDISTRPPWKKVLELCK 631
            +DGD  L+ESRAI +Y AE+Y  +G +L+ +  ++ +     WL+VE   ++P   +L  + +F   FG   D  +V+E + KL K LDVYE RL+KS++LAGD F+LADL  +P  HYL+G   +  +  +R  VS W   IS RP W KV++L K
Sbjct:  107 EDGDLTLFESRAITQYLAEEYSEKGEKLISQDCKKVKATTNVWLQVEGQQFDPNASKLAFERVFKGMFGMTTDPAAVQELEGKLQKVLDVYEARLAKSEFLAGDSFTLADLHHLPAIHYLLGTDSKV-LFDSRPKVSEWIKKISARPAWAKVIDLQK 262          
BLAST of CN188671 vs. ExPASy Swiss-Prot
Match: GSTF2_ORYSJ (Probable glutathione S-transferase GSTF2 OS=Oryza sativa subsp. japonica GN=GSTF2 PE=1 SV=3)

HSP 1 Score: 122.865 bits (307), Expect = 1.389e-27
Identity = 69/159 (43.40%), Postives = 95/159 (59.75%), Query Frame = -2
Query:  158 QDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSK-FGRPVDDQSVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSPIPFTHYLVGPMGRQHMIRARKHVSAWWDDISTRPPWKKVLELCKTP 631
            QDGD  L+ESRAI +Y   K + +   L    ++E  +V+ WLEVE++ Y PA+  +  Q L     FG P D++ V+E+ EKL K L+VYE RL+K KYLAGD+ S+ADLS +  T   +G      ++ A  HV AWW D+  RP  +KV  L K P
Sbjct:   59 QDGDLFLWESRAICKYVCRKNKPE--LLKDGDLKESAMVDVWLEVESNQYTPALNPILFQCLIRPMMFGAPPDEKVVEENLEKLKKVLEVYEARLTKCKYLAGDYISVADLSHVAGT-VCLGATPHASVLDAYPHVKAWWTDLMARPSSQKVASLMKPP 214          
BLAST of CN188671 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.389e-27
Identity = 66/153 (43.14%), Postives = 92/153 (60.13%), Query Frame = -2
Query:  179 QDGDFILYESRAIMRYYAEKYRSQGTELLGK-TIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKF-GRPVDDQSVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSPIPFTHYLVGPMGRQHMIRARKHVSAWWDDISTRPPWKKV 631
            QDGD  L+ESRAI +Y   KY+++  +LL +  + E  +V+ W EVE H YN AI  +  + + +    G P + + V ES EKL K L+VYE RLS+S YLAGDF S ADL+  P+T Y +G      +  +  HV AWW+ +  RP  KK+
Sbjct:   59 QDGDLYLFESRAIGKYILRKYKTREADLLREGNLREAAMVDVWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMG-TPYASLFDSYPHVKAWWERLMARPSVKKL 210          
BLAST of CN188671 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 122.094 bits (305), Expect = 2.370e-27
Identity = 68/157 (43.31%), Postives = 90/157 (57.32%), Query Frame = -2
Query:  158 DGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDDQSVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSPIPFTHYLVGPMGRQHMIRARKHVSAWWDDISTRPPWKKVLELCKTP 628
            DGD +L+ESRAI RY A KY S+GT+LL  T     L E WLEVE+H+++P    L  QLL     G   D   V++  E+L K LDVYE  L+++KYLAGD F+LAD +             R   + AR HV AWW+ I+ RP ++K +     P
Sbjct:   60 DGDEVLFESRAINRYIASKYASEGTDLLPATASAAKL-EVWLEVESHHFHPNASPLVFQLLVRPLLGGAPDAAVVEKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADANHALLPALTSARPPRPGCVAARPHVKAWWEAIAARPAFQKTVAAIPLP 215          
BLAST of CN188671 vs. ExPASy Swiss-Prot
Match: GSTF_SILCU (Glutathione S-transferase OS=Silene cucubalus GN=GST PE=1 SV=3)

HSP 1 Score: 120.553 bits (301), Expect = 6.895e-27
Identity = 67/159 (42.14%), Postives = 94/159 (59.12%), Query Frame = -2
Query:  164 QDGDFILYESRAIMRY--YAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDDQSVKESDEKLGKTLDVYEERLSKSKYL-AGDFFSLADLSPIPFTHYLVGPMGRQHMIRARKHVSAWWDDISTRPPWKKVLELCK 631
            +DG+  L+ESRAI +Y  Y   ++++GT L+ K   E      W EVEAH ++P   +L  +L+F   FG   D   V+E++ KL K LDVYE RL++S+YL A D F+L DL  +P   YL+G   ++ +   R HVSAW   I  RP W+K L L K
Sbjct:   58 EDGEIKLFESRAITKYLAYTHDHQNEGTSLIHKEKHEMAAQLVWEEVEAHQFDPVASKLAWELVFKGIFGMQTDTTVVEENEAKLAKVLDVYEARLTESEYLGANDSFTLVDLHHLPLLGYLMGTQVKK-LFEERAHVSAWCKKILARPSWEKTLALQK 215          
BLAST of CN188671 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 9.005e-27
Identity = 64/153 (41.83%), Postives = 91/153 (59.48%), Query Frame = -2
Query:  173 QDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDDQSVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSPIPFTHYLVGPMGRQHMIRARKHVSAWWDDISTRPPWKKVLE 631
            +DGD  L+ESRAI +Y A  Y   G +L+ +  ++  ++  W+EVE   + P   +LT +L      G   DD +VKES+ +L K LD+YE RL++SKYL GD F+L DL  IP  +YL+    ++ +  +R  VSAW  DI  RP W K LE
Sbjct:   58 EDGDLKLFESRAITQYIAHVYADNGYQLILQDPKKMPIMSVWMEVEGQKFEPHASKLTWELGIKPIIGMTTDDDAVKESEVQLSKVLDIYETRLAESKYLGGDSFTLVDLHHIPNIYYLMSTKVKE-VFDSRPRVSAWCADILARPAWVKGLE 209          
BLAST of CN188671 vs. ExPASy Swiss-Prot
Match: GSTF4_MAIZE (Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 2.006e-26
Identity = 66/154 (42.86%), Postives = 91/154 (59.09%), Query Frame = -2
Query:  173 QDGDFILYESRAIMRYYAEKYRSQGTELLGK-TIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDDQSVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSPIPFTHYLVGPMGRQHMIRARKHVSAWWDDISTRPPWKKVLE 631
            +DGD  L+ESRAI R+   K++    ELLG   +E+  +V+ WLEVEAH  +P    + ++ +F+   GR  +   V E+ EKL K L+VYE RL+   YLAGDF SLADLSP    H L+       ++ A  HVSAWW  ++ RP   KV +
Sbjct:   61 EDGDLTLFESRAIARHVLRKHKP---ELLGGGRLEQTAMVDVWLEVEAHQLSPPAIAIVVECVFAPFLGRERNQAVVDENVEKLKKVLEVYEARLATCTYLAGDFLSLADLSPFTIMHCLMA-TEYAALVHALPHVSAWWQGLAARPAANKVAQ 210          
The following BLAST results are available for this feature:
BLAST of CN188671 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
GSTF3_ARATH1.925e-5364.00Glutathione S-transferase ERD13 OS=Arabidopsis tha... [more]
GSTF7_ARATH4.764e-3646.10Glutathione S-transferase OS=Arabidopsis thaliana ... [more]
GSTF_HYOMU9.297e-3243.79Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GSTF6_ARATH7.366e-2942.04Glutathione S-transferase 6, chloroplastic OS=Arab... [more]
GSTF2_ORYSJ1.389e-2743.40Probable glutathione S-transferase GSTF2 OS=Oryza ... [more]
GSTF1_ORYSJ1.389e-2743.14Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]
GSTF3_MAIZE2.370e-2743.31Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]
GSTF_SILCU6.895e-2742.14Glutathione S-transferase OS=Silene cucubalus GN=G... [more]
GSTF2_TOBAC9.005e-2741.83Glutathione S-transferase APIC OS=Nicotiana tabacu... [more]
GSTF4_MAIZE2.006e-2642.86Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006I15_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006I15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188671 ID=CN188671; Name=CN188671; organism=Citrus sinensis; type=EST; length=632bp
TTTTTTTTTTTTTTTTTAAAAGCTCCAACTCCAAACATTTCTTTATTTGA
AACACACATATGCAAGAAACATATCCCACAGCCTTAAACAAACCAAGTAG
TAGAGAAGTAAAACACAAGCCCGAAAATTGAAACACATACAATCAAGCTC
AGCCGAAAGGAGTCTTACAGAGCTCAAGGACTTTCTTCCAGGGGGGGCGG
GTGCTAATATCATCCCACCAGGCACTCACATGCTTCCTGGCTCTAATCAT
ATGCTGTCTCCCCATCGGCCCAACCAAGTAGTGGGTAAATGGAATGGGAC
TCAGATCAGCCAGGCTGAAGAAATCACCAGCCAAATACTTGCTCTTCGAC
AGCCTCTCCTCGTAAACGTCGAGCGTTTTTCCAAGCTTTTCGTCACTCTC
CTTCACCGATTGGTCATCAACGGGACGTCCAAACTTGGAGGAAAATAAAA
GTTGGATGGTCAGCTCGTAAATTGCTGGGTTGTAGTTGTGTGCCTCTACT
TCTAGCCACTGTTCCACCAGGCCTCTTTCTTCAATTGTTTTACCCAGAAG
TTCGGTTCCTTGAGACCTGTACTTTTCAGCGTAGTACCTCATGATAGCTC
GCGACTCGTATAAAATAAAATCTCCATCTTGA
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