CN188670

Overview
NameCN188670
Unique NameCN188670
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2680 contig Csv1_Contig2680:1..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188670 vs. ExPASy Swiss-Prot
Match: PTRB_ECOLI (Protease 2 OS=Escherichia coli (strain K12) GN=ptrB PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 4.929e-27
Identity = 82/220 (37.27%), Postives = 117/220 (53.18%), Query Frame = 1
Query:   55 HFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVY----SIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVY-RKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGG 699
            H F  R +    N  L    + +  +   LIP RE++ L+   LF D L V ER+ GL       L  +    + + G   + F DP Y    + +P         LR+ YSS+ TP ++++ DMD G   + K +T + GF   NY +E  W  A DG ++P+ +VY RK+  K  G +PLL+YGYGSY    D  F+ SRLSLLDRGF++AI  +RGG
Sbjct:  280 HRFYLRSNRHGKNFGLYRTRMRDEQQWEELIPPRENIMLEGFTLFTDWLVVEERQRGLTS-----LRQINRKTREVIG---IAFDDPAYVTWIAYNPEPETAR---LRYGYSSMTTPDTLFELDMDTGERRVLK-QTEVPGFYAANYRSEHLWIVARDGVEVPVSLVYHRKHFRK--GHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGG 485          
BLAST of CN188670 vs. ExPASy Swiss-Prot
Match: PTRB_MORLA (Protease 2 OS=Moraxella lacunata GN=ptrB PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.365e-23
Identity = 61/204 (29.90%), Postives = 107/204 (52.45%), Query Frame = 1
Query:   91 NSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDP-SESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGG 699
            N +LL CP+++ S    ++ + E   LQ++  F D L +  RE GL +I       +          + + + +P+Y++   SE  + +  +   Y SL TP + +  ++  G     ++  V G +D + +  E+ WA+   G ++P+  VY +  +  +G  PL+LYGYGSY   +DP F+  RL LL++G +F  AQ+RGG
Sbjct:  295 NFQLLRCPLNDLSSKVNVVEYNEERYLQEMYPFRDKLLIAGRENGLTQIWVVHDGEL----------QQISWDEPLYTVAVLSEQSYDTNEVLIQYESLLTPKTTFGLNLQTGEKQCLQVAPVSGEYDRSQFRQEQLWATGRSGVKVPMTAVYLEGALD-NGPAPLILYGYGSYGSNSDPRFDPYRLPLLEKGIVFVTAQVRGG 487          
BLAST of CN188670 vs. ExPASy Swiss-Prot
Match: Y4SO_RHISN (Uncharacterized peptidase y4sO OS=Rhizobium sp. (strain NGR234) GN=NGR_a01580 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16
Identity = 74/243 (30.45%), Postives = 117/243 (48.15%), Query Frame = 1
Query:    1 RLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETT--VLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTY-RLPAVGEPLKSLQGGKSVEF-IDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF------NSSRLSLLDRGFIFAIAQIRGG 699
            R+  R +G +  A H GN F   R +D   N  L+   +D+TS +    ++PHR  + L++I +  +H+ V EREG   ++  + R   VG  +  ++   +V   +    S   +   +    L +   S  TP     +D+    S +    T++ GF+   Y      A A DG ++PI IV R++  + DG  P+LL  YG Y   + PAF       ++RLSLLDRG  F I  +RGG
Sbjct:  270 RILARELGHEIYAEHWGNEFLF-RVNDTGPNLRLVRTAIDDTSPSRWQEVVPHRAGITLEEIHVLEEHVIVLEREGIQPRLVAHHRNGRVGPSIVPVEHSCTVTVGLSAGGSYSCARHPYRVSALTYKICSFVTPDIFIQHDLLTDKSKVL-YRTLVSGFEPELYEARVVMAKAEDGVEVPISIVARRDRGE-DG--PVLLNVYGCYGAQSLPAFFGWPSSMTARLSLLDRGVAFGIVHVRGG 507          
BLAST of CN188670 vs. ExPASy Swiss-Prot
Match: PPCE_AERHY (Prolyl endopeptidase OS=Aeromonas hydrophila PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 8.720e-16
Identity = 41/113 (36.28%), Postives = 70/113 (61.95%), Query Frame = 1
Query:  361 LRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGG 699
            L F + +   PP++Y ++ + G   L +       F   +Y +E+++  + DGT++P+ I YRK L KLDGS+P +LYGYG +++   P+F+ S  + LD G ++A+A +RGG
Sbjct:  382 LYFGFENYAQPPTLYKFEPNSGAISLYRASAA--PFKPEDYVSEQRFYRSKDGTRVPLIISYRKGL-KLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGG 491          
BLAST of CN188670 vs. ExPASy Swiss-Prot
Match: Y4QF_RHISN (Uncharacterized peptidase y4qF OS=Rhizobium sp. (strain NGR234) GN=NGR_a01920 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.382e-15
Identity = 77/248 (31.05%), Postives = 113/248 (45.56%), Query Frame = 1
Query:    1 RLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETT--VLIPHRESVKLQDIQLFIDHLAVYEREGGLQK-ITTYRLPAVG------EPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF------NSSRLSLLDRGFIFAIAQIRGG 699
            R+  R +G    A H  + F   R  D      L++ P+D+ S +    ++PHR  V + +I +   HL + EREG   + I+  R   VG      EP  +++ G S       YS   +   F S  L +  SS  TP +  ++D     SV+   E  + G+D   Y      A A DG Q+PI +V R++        P+LL  YG Y I   P+F       ++RLSLLDR   F I  +RGG
Sbjct:  301 RIVMRELGHQIYAEHWYDRFLF-RVDDAGPYWRLVSAPIDDPSPSRWEEVVPHRAGVTIDEIHVLEQHLVLLEREGLRPRLISRNRSGRVGAVIVPDEPSCTIRVGLSA---GGCYSA--ARHPFRSSKLTYSVSSFVTPDTFIEHDFANDRSVVL-CEARVPGYDATQYLATVVMAEAEDGVQVPISLVARRDRT---SPGPVLLSVYGCYGIPRLPSFLAWPSSMTARLSLLDREVAFGIVHVRGG 538          
BLAST of CN188670 vs. ExPASy Swiss-Prot
Match: PPCE_FLAME (Prolyl endopeptidase OS=Flavobacterium meningosepticum GN=f1pep1 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.259e-14
Identity = 53/170 (31.18%), Postives = 88/170 (51.76%), Query Frame = 1
Query:  190 IDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGG 699
            ID +  Y++ G L  +   +LP  G    S  GG+  E                 + L + +++  TPP+++ Y++  G S + +   V   F+  NY +E+ + ++SDGT+IP+ I Y+K L K DG +P +LY YG + I   PAF+      ++ G I+A+  IRGG
Sbjct:  364 IDQVKQYDKNGKL--VRAIKLPGSGNA--SGFGGEKTE-----------------KDLYYSFTNYITPPTIFKYNVTTGNSEVYQKPKVK--FNPENYVSEQVFYTSSDGTKIPMMISYKKGLKK-DGKNPTILYSYGGFNISLQPAFSVVNAIWMENGGIYAVPNIRGG 509          
BLAST of CN188670 vs. ExPASy Swiss-Prot
Match: PPCF_ELIMR (Prolyl endopeptidase OS=Elizabethkingia miricola PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.290e-13
Identity = 39/113 (34.51%), Postives = 68/113 (60.18%), Query Frame = 1
Query:  361 LRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGG 699
            L + +++  TPP+++ + +D G S + +   V   F+  NY +E+ + +++DGT+IP+ I  +K L K DG +P +LY YG + I   PAF+      ++ G I+A+  IRGG
Sbjct:  400 LYYSFTNYITPPTIFKFSIDSGKSEVYQKPKVK--FNPENYVSEQVFYTSADGTKIPMMISNKKGLKK-DGKNPTILYSYGGFNISLQPAFSVVNAIWMENGGIYAVPNIRGG 509          
BLAST of CN188670 vs. ExPASy Swiss-Prot
Match: Y174_RICPR (Uncharacterized peptidase RP174 OS=Rickettsia prowazekii GN=RP174 PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.303e-11
Identity = 38/104 (36.54%), Postives = 61/104 (58.65%), Query Frame = 1
Query:  391 PPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSL-LDRGFIFAIAQIRGG 699
            PP++Y +     + V++K    L  FD+ NY  E+K A++ DG +IP  IVY+K  +K DG +P LL  YG +++ N P F+  +  + +  G +  +A IRGG
Sbjct:  429 PPTIYLWVKTHELKVIRK---ALYSFDSENYVLEQKEATSFDGVKIPYFIVYKKG-IKFDGKNPTLLEAYGGFQVINSPYFSRIKNEVWVKNGGVSVLANIRGG 528          
BLAST of CN188670 vs. ExPASy Swiss-Prot
Match: PPCE_HUMAN (Prolyl endopeptidase OS=Homo sapiens GN=PREP PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.702e-11
Identity = 42/115 (36.52%), Postives = 67/115 (58.26%), Query Frame = 1
Query:  367 FHYSSLRTPPSVYDYDM---DMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLL-DRGFIFAIAQIRGG 699
            + ++S  +P  +Y  D+   ++   V +  E  + G D ++Y T + +  + DGT+IP+ IV++K  +KLDGS P  LYGYG + I   P ++ SRL  +   G I A+A IRGG
Sbjct:  396 YQFTSFLSPGIIYHCDLTKEELEPRVFR--EVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKG-IKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGILAVANIRGG 507          
BLAST of CN188670 vs. ExPASy Swiss-Prot
Match: PPCE_RAT (Prolyl endopeptidase OS=Rattus norvegicus GN=Prep PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.223e-11
Identity = 41/115 (35.65%), Postives = 67/115 (58.26%), Query Frame = 1
Query:  367 FHYSSLRTPPSVYDYDM---DMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLL-DRGFIFAIAQIRGG 699
            + ++S  +P  +Y  D+   ++   V +  E  + G D ++Y T + +  + DGT+IP+ IV++K  +KLDGS P  LYGYG + I   P ++ SRL  +   G + A+A IRGG
Sbjct:  396 YQFTSFLSPGVIYHCDLTREELEPRVFR--EVTVKGIDASDYQTIQVFYPSKDGTKIPMFIVHKKG-IKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGG 507          
The following BLAST results are available for this feature:
BLAST of CN188670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
PTRB_ECOLI4.929e-2737.27Protease 2 OS=Escherichia coli (strain K12) GN=ptr... [more]
PTRB_MORLA7.365e-2329.90Protease 2 OS=Moraxella lacunata GN=ptrB PE=3 SV=1[more]
Y4SO_RHISN2.295e-1630.45Uncharacterized peptidase y4sO OS=Rhizobium sp. (s... [more]
PPCE_AERHY8.720e-1636.28Prolyl endopeptidase OS=Aeromonas hydrophila PE=1 ... [more]
Y4QF_RHISN7.382e-1531.05Uncharacterized peptidase y4qF OS=Rhizobium sp. (s... [more]
PPCE_FLAME1.259e-1431.18Prolyl endopeptidase OS=Flavobacterium meningosept... [more]
PPCF_ELIMR5.290e-1334.51Prolyl endopeptidase OS=Elizabethkingia miricola P... [more]
Y174_RICPR1.303e-1136.54Uncharacterized peptidase RP174 OS=Rickettsia prow... [more]
PPCE_HUMAN1.702e-1136.52Prolyl endopeptidase OS=Homo sapiens GN=PREP PE=1 ... [more]
PPCE_RAT2.223e-1135.65Prolyl endopeptidase OS=Rattus norvegicus GN=Prep ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006I14_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006I14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188670 ID=CN188670; Name=CN188670; organism=Citrus sinensis; type=EST; length=701bp
AGGTTGACACCTCGTGTAGTAGGAGTTGATACAGCAGCCAGTCATCGTGG
AAACCATTTCTTCATAACAAGGAGAAGTGATGAGTTATTCAATTCAGAAC
TACTAGCATGTCCTGTGGACAACACATCTGAAACTACGGTTCTTATTCCA
CACAGAGAAAGTGTAAAACTTCAGGACATACAACTTTTTATTGATCATCT
TGCTGTGTATGAGCGTGAAGGGGGTCTGCAAAAAATAACTACTTATCGTC
TTCCAGCTGTAGGGGAGCCACTCAAAAGCCTCCAAGGTGGCAAGTCTGTT
GAATTTATAGATCCAGTATACTCAATCGATCCATCAGAATCAGTGTTTTC
ATCCAGGATTTTGCGGTTTCATTATAGCTCATTGAGGACACCTCCTTCCG
TATATGATTATGATATGGACATGGGGATTTCTGTTTTGAAGAAAATTGAA
ACTGTCTTGGGAGGTTTTGATACAAACAATTATTTTACTGAAAGGAAGTG
GGCCAGTGCTTCAGATGGCACACAGATTCCTATATGCATTGTCTATCGGA
AGAATCTTGTGAAGCTTGATGGATCAGATCCATTACTACTTTATGGCTAT
GGTTCGTATGAGATCTGCAATGATCCTGCTTTCAACTCATCTCGGCTTTC
TCTATTAGATCGTGGTTTCATCTTTGCGATAGCTCAGATTCGGGGGGGTG
G
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