CN181669

Overview
NameCN181669
Unique NameCN181669
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3695 contig Csv1_Contig3695:46..686. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181669 vs. ExPASy Swiss-Prot
Match: HPRT_MYCLE (Hypoxanthine-guanine phosphoribosyltransferase OS=Mycobacterium leprae GN=hpt PE=3 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 8.666e-33
Identity = 75/179 (41.90%), Postives = 105/179 (58.66%), Query Frame = 1
Query:    7 TQDQISRRVTELAAQITHDFNXXXXXXXXXXXAT----GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECYK 531
            TQ+QI  R+ EL AQI HD+                  GA +F+ DL R I LP   +F+   SYGS   SSG   +  D   D+ D++V++VED+VD+G TLS L+ NL ++   S+ VCTLL KP   +  V++      Y GF+ P+ FVVGYG+D+ E YR+LPY+G+L P  Y+
Sbjct:   29 TQEQIQARIAELGAQIGHDYRDRSPASDQDLLLVTVLKGAVIFVTDLARAIPLPTQFEFMAVSSYGSSMSSSGVVRILKDLDRDIHDRNVLIVEDVVDSGLTLSWLLRNLATRRPQSLQVCTLLRKPDALRANVDIT-----YVGFDIPNDFVVGYGLDYDERYRDLPYIGMLDPRVYQ 202          
BLAST of CN181669 vs. ExPASy Swiss-Prot
Match: HPRT_STAAW (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus aureus (strain MW2) GN=hpt PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 9.581e-32
Identity = 73/176 (41.48%), Postives = 106/176 (60.23%), Query Frame = 1
Query:    1 LWTQDQISRRVTELAAQITHDFNXXXXXXXXXXXATGAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 528
            L T++ I     EL AQ+T D+              G+ +F++DL++ I   +S+DF+   SY  GT S+G   +  D    +++K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LKPE Y
Sbjct:    9 LLTEEDIQNICKELGAQLTKDYQGKPLVCVGILK--GSAMFMSDLIKRIDTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVY 177          
BLAST of CN181669 vs. ExPASy Swiss-Prot
Match: HPRT_STAAS (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=hpt PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 9.581e-32
Identity = 73/176 (41.48%), Postives = 106/176 (60.23%), Query Frame = 1
Query:    1 LWTQDQISRRVTELAAQITHDFNXXXXXXXXXXXATGAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 528
            L T++ I     EL AQ+T D+              G+ +F++DL++ I   +S+DF+   SY  GT S+G   +  D    +++K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LKPE Y
Sbjct:    9 LLTEEDIQNICKELGAQLTKDYQGKPLVCVGILK--GSAMFMSDLIKRIDTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVY 177          
BLAST of CN181669 vs. ExPASy Swiss-Prot
Match: HPRT_STAAR (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=hpt PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 9.581e-32
Identity = 73/176 (41.48%), Postives = 106/176 (60.23%), Query Frame = 1
Query:    1 LWTQDQISRRVTELAAQITHDFNXXXXXXXXXXXATGAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 528
            L T++ I     EL AQ+T D+              G+ +F++DL++ I   +S+DF+   SY  GT S+G   +  D    +++K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LKPE Y
Sbjct:    9 LLTEEDIQNICKELGAQLTKDYQGKPLVCVGILK--GSAMFMSDLIKRIDTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVY 177          
BLAST of CN181669 vs. ExPASy Swiss-Prot
Match: HPRT_STAAN (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus aureus (strain N315) GN=hpt PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 9.581e-32
Identity = 73/176 (41.48%), Postives = 106/176 (60.23%), Query Frame = 1
Query:    1 LWTQDQISRRVTELAAQITHDFNXXXXXXXXXXXATGAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 528
            L T++ I     EL AQ+T D+              G+ +F++DL++ I   +S+DF+   SY  GT S+G   +  D    +++K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LKPE Y
Sbjct:    9 LLTEEDIQNICKELGAQLTKDYQGKPLVCVGILK--GSAMFMSDLIKRIDTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVY 177          
BLAST of CN181669 vs. ExPASy Swiss-Prot
Match: HPRT_STAAM (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=hpt PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 9.581e-32
Identity = 73/176 (41.48%), Postives = 106/176 (60.23%), Query Frame = 1
Query:    1 LWTQDQISRRVTELAAQITHDFNXXXXXXXXXXXATGAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 528
            L T++ I     EL AQ+T D+              G+ +F++DL++ I   +S+DF+   SY  GT S+G   +  D    +++K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LKPE Y
Sbjct:    9 LLTEEDIQNICKELGAQLTKDYQGKPLVCVGILK--GSAMFMSDLIKRIDTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVY 177          
BLAST of CN181669 vs. ExPASy Swiss-Prot
Match: HPRT_STAAC (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus aureus (strain COL) GN=hpt PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 9.581e-32
Identity = 73/176 (41.48%), Postives = 106/176 (60.23%), Query Frame = 1
Query:    1 LWTQDQISRRVTELAAQITHDFNXXXXXXXXXXXATGAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 528
            L T++ I     EL AQ+T D+              G+ +F++DL++ I   +S+DF+   SY  GT S+G   +  D    +++K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LKPE Y
Sbjct:    9 LLTEEDIQNICKELGAQLTKDYQGKPLVCVGILK--GSAMFMSDLIKRIDTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVY 177          
BLAST of CN181669 vs. ExPASy Swiss-Prot
Match: HPRT_DICDI (Hypoxanthine-guanine phosphoribosyltransferase OS=Dictyostelium discoideum GN=hprT PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.634e-31
Identity = 73/180 (40.56%), Postives = 110/180 (61.11%), Query Frame = 1
Query:    1 LWTQDQISRRVTELAAQITHDFNXXXXXXXXXXXATGAFLFLADLVRNIHLP---ISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECYK 531
            ++T+ +I  RV+EL  QIT D+              G+F+F++DLVR+IHLP   +S++F+   SYG+ T SSG   + +D +  ++ K V+++EDIVD+G TL  L+  L  +  +S+    LL K    K++V +      Y GF+ P  F++GYG+DFAE YR LPY+G LK ECYK
Sbjct:    6 IFTEKEIKERVSELGRQITQDYKDSKNLVLVGILK-GSFVFMSDLVRSIHLPNTNVSLEFMSISSYGAETSSSGVIRIMMDLRTSIEGKDVLIIEDIVDSGLTLKHLMELLNHRNPNSLHTAVLLRKKEGLKVEVPVK-----YMGFDIPMVFIIGYGLDFAENYRELPYLGELKEECYK 179          
BLAST of CN181669 vs. ExPASy Swiss-Prot
Match: HPRT_BACSU (Hypoxanthine-guanine phosphoribosyltransferase OS=Bacillus subtilis GN=hprT PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.634e-31
Identity = 70/177 (39.55%), Postives = 110/177 (62.15%), Query Frame = 1
Query:    1 LWTQDQISRRVTELAAQITHDFNXXXXXXXXXXXATGAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECYK 531
            L ++++I ++V EL A++T ++              GA  F+ADL+++I   + +DF+   SYG+ T+SSG   +  D    V+ + ++++EDI+D+G TLS L+     + A S+ + TLLDKP+ RK  ++       + GFE PD FVVGYG+D+AE YRNLPY+GVLKP  Y+
Sbjct:   10 LISEEEIQKKVKELGAELTSEYQDTFPLAIGVLK--GALPFMADLIKHIDTYLEMDFMDVSSYGNSTVSSGEVKIIKDLDTSVEGRDILIIEDIIDSGLTLSYLVELFRYRKAKSIKIVTLLDKPSGRKADIK-----ADFVGFEVPDAFVVGYGLDYAERYRNLPYIGVLKPAVYE 179          
BLAST of CN181669 vs. ExPASy Swiss-Prot
Match: TILS_LISMO (Bifunctional protein tilS/hprT OS=Listeria monocytogenes GN=tilS/hprT PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.211e-31
Identity = 69/176 (39.20%), Postives = 108/176 (61.36%), Query Frame = 1
Query:    1 LWTQDQISRRVTELAAQITHDFNXXXXXXXXXXXATGAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 528
            L ++D++  ++ EL  ++T ++              GA  F+ DL++ +   + +DF+   SYG+GT+SSG   +  D    V+ + V+++EDI+D+G TLS L+  +  + A SV + TLLDKPA R +++E       Y GF  P+ FVVGYG+D+AE YRNLPY+G+LKPE Y
Sbjct:  478 LISEDELQEKIRELGRELTTEYEGRNPLVVGVLK--GATPFMTDLLKRVDTYLEMDFMDVSSYGNGTVSSGEVKIIKDLNASVEGRDVLVIEDIIDSGRTLSYLVDLIKYRKAKSVKLVTLLDKPAGRNVEIE-----ADYVGFVVPNEFVVGYGLDYAERYRNLPYIGILKPEIY 646          
The following BLAST results are available for this feature:
BLAST of CN181669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
HPRT_MYCLE8.666e-3341.90Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STAAW9.581e-3241.48Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STAAS9.581e-3241.48Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STAAR9.581e-3241.48Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STAAN9.581e-3241.48Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STAAM9.581e-3241.48Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STAAC9.581e-3241.48Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_DICDI1.634e-3140.56Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_BACSU1.634e-3139.55Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
TILS_LISMO6.211e-3139.20Bifunctional protein tilS/hprT OS=Listeria monocyt... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001E24_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001E24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181669 ID=CN181669; Name=CN181669; organism=Citrus sinensis; type=EST; length=641bp
CTTTGGACACAGGACCAAATTTCTCGCCGAGTAACGGAGCTTGCCGCCCA
AATCACCCACGATTTCAACTCCGTTTCCCCGCCGCCTGTCGTCGTGGGTG
TCGCCACCGGAGCGTTTCTCTTCTTGGCTGACCTGGTCAGAAATATTCAC
CTCCCTATCTCCGTTGATTTCATTCGTGCTGAATCCTACGGCTCCGGTAC
TCTCTCCAGTGGAGCCCCTGTTCTTTCCCTCGATTCGAAACTCGATGTTA
AGGACAAGCACGTAATCTTGGTCGAGGACATTGTAGATACAGGAACCACA
TTATCATCTCTTATTGCAAACTTGGTATCCAAAGGAGCATCTTCTGTCTC
AGTCTGCACTCTCCTTGATAAACCAGCCAGAAGAAAGATTCAGGTGGAGC
TAGTGGGTGAAGGAAAGTTCTATCGGGGATTTGAGTGTCCAGATTATTTC
GTTGTGGGCTATGGAATGGACTTCGCTGAATTATATAGGAACCTGCCTTA
TGTTGGAGTGTTGAAGCCTGAATGCTACAAATAATTTTATCCGTCACTGG
CTCTTTGACAGGGCGGTCAATAAACTTATTCTACAAATCCAGACTCTTTG
CAACTTCTACAGATTCTTGGCATTTGGTAATTGATGATAAA
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