CN181666
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181666 vs. ExPASy Swiss-Prot
Match: PUB6_ARATH (U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6 PE=2 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 1.228e-41 Identity = 94/147 (63.95%), Postives = 111/147 (75.51%), Query Frame = -1 Query: 186 GKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFREQRQRDHPPVDIGQQDDDSSEKLKPTYTPTPDHAPES--KPLCKSISRRK-MGKAFSFLWKSKSYSV 617 GKEEM +T G++S LATVLDTG+ +EQEQAVSCL +LC G+E C QMVLQEGVIP+LVSISVNGS RGRDK+Q+LLMLFREQR RD P + +++ P P P APES KPL KSISRRK M + FSFLWK KS+S+ Sbjct: 626 GKEEMITTQGMISTLATVLDTGDTVEQEQAVSCLVILCTGSESCIQMVLQEGVIPSLVSISVNGSPRGRDKSQKLLMLFREQRHRDQPSPN--KEEAPRKTVSAPMAIPAPVSAPESEVKPLTKSISRRKTMTRPFSFLWK-KSHSI 769
BLAST of CN181666 vs. ExPASy Swiss-Prot
Match: PUB45_ARATH (U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.961e-39 Identity = 87/146 (59.59%), Postives = 107/146 (73.29%), Query Frame = -1 Query: 180 GKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFREQRQRDHPPVDIGQQDDDSSEKLKPTYTPTPDHAPESKPLCKSISRRKMGKAFSFLWKSKSYSVSQ 617 GK+EM S P LVS L T+LDTGE EQEQAVS L +LCN +E C +MVLQEGVIP+LVSISVNG+ RGR++AQ+LL LFRE RQRD + Q + +S + ++ E+KP CKS SR+KMG+AFSFLWKSKS+SV Q Sbjct: 624 GKDEMVSAPSLVSNLCTILDTGEPNEQEQAVSLLLILCNHSEICSEMVLQEGVIPSLVSISVNGTQRGRERAQKLLTLFRELRQRDQTHLTEPQHTEVTSP--EDGFSVASAAVTETKPQCKSASRKKMGRAFSFLWKSKSFSVYQ 767
BLAST of CN181666 vs. ExPASy Swiss-Prot
Match: PUB7_ARATH (U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7 PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 6.528e-35 Identity = 86/157 (54.78%), Postives = 105/157 (66.88%), Query Frame = -1 Query: 180 GKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFREQRQ--------RDHPPVDIGQQDDDSSEKLKPTYTPTPDHAPESKP--LCKSISRRK-MGKAFSFLWKSKSYSVSQ 617 GK+E S+ G++S LATVLD G+ EQEQAVSCL +LCNG E C QMVLQEGVIP+LVSISVNG+ RGR+K+Q+LLMLFRE+RQ RD PP + S+ TP + +P L KS+SRRK M + FSF WK KSYSV + Sbjct: 627 GKDEAVSSQGMISSLATVLDMGDTTEQEQAVSCLLILCNGRESCIQMVLQEGVIPSLVSISVNGTPRGREKSQKLLMLFREERQQRDQPSSNRDEPPQKEPARKSLSAPLSVHGSTPASASVQDYEPRVLSKSMSRRKSMARPFSFFWK-KSYSVRE 782 The following BLAST results are available for this feature:
BLAST of CN181666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181666 ID=CN181666; Name=CN181666; organism=Citrus sinensis; type=EST; length=617bpback to top |