CN181650

Overview
NameCN181650
Unique NameCN181650
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1296 contig Csv1_Contig1296:885..1556. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181650 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.607e-24
Identity = 60/134 (44.78%), Postives = 84/134 (62.69%), Query Frame = -3
Query:  212 CPLDVIQLPSDMQNGIELTLSPYNNST-IVRESTDLNLRFSVLLSGRD-YCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCHNVGR-SFEDGVRRLVL 604
            CP  V+Q  SD+ NG  +  S  ++   +VR STD+N+ F  +   RD  C+   +W++DNYD ++GKW++TT G+ G PG  TL +WFK+EK G     YK   CPSVC+SC  LC ++GR S +DG  RL L
Sbjct:   69 CPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPI---RDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG--YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLAL 197          
BLAST of CN181650 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 101.679 bits (252), Expect = 3.705e-21
Identity = 53/140 (37.86%), Postives = 80/140 (57.14%), Query Frame = -3
Query:  188 CPLDVIQLPSDMQNGIELTLSPYN-NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCHNVGRSFEDGVRRLVLVRDDEPAF 604
            CP  V+Q   ++ +   L   P N    +VR STDLN+ FS  +  R       +W++D YD ++G++F+T GG+ G+PG ET+ +WFK+E+     G YK+V CP+VC SC   C +VG   +   RR + + D   AF
Sbjct:   76 CPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCR--WTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCG-SGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSDKPFAF 212          
BLAST of CN181650 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.326e-15
Identity = 58/160 (36.25%), Postives = 80/160 (50.00%), Query Frame = -3
Query:  203 IVSAIWXXXXXXXXXXXXXXGY-CPLDVIQLPSDMQNGIELTLSPYNN--STIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCHNVGRSFED-GVRRLVLVRD 670
            +VSAIW                 CPL V+Q P D  NG  +  S   N    IV ES DLN++F++ ++    CNE   WKVD +    G W +T GG  G+ G E+  + FK++K G  P  YK   CPS   + +  C+NV   F+   +RRL+L  D
Sbjct:   22 VVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFD--NGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN----CNETTAWKVDRFPGVIG-WTVTLGGEKGYHGFESTHSMFKIKKAG-LPFSYKFHFCPSYPRTRLIPCNNVDIFFDKYRIRRLILTND 173          
The following BLAST results are available for this feature:
BLAST of CN181650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ASP_THECC1.607e-2444.7821 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU3.705e-2137.86Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA2.326e-1536.25Latex serine proteinase inhibitor OS=Carica papaya... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0001E13_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001E13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181650 ID=CN181650; Name=CN181650; organism=Citrus sinensis; type=EST; length=672bp
AGGATACACCAACAGTAGAATTTATTAACCCCGAAAGGATCACAGGGTAC
TTATTCATAATTTTAATCCTAGAGATTAAAGAGCAGCTAGCCTGGTCCGT
TATTTAGAATAATAATACCGCTAGCTGGTTAGGGTACATTGATTACACAG
ACGTTGATCTTTCTGTAGCGGGAATTAACACAACAGGAAATGCCGGCTCA
TCATCACGAACCAGAACCAGACGTCGAACGCCATCCTCAAACGAACGGCC
AACGTTGTGGCAGAGTTTGACACAAGACTCGCAAACGGATGGACAATGAA
CGATTTTGTATATACCTGGAAAATTTCCAATTTTCTCAAGCTTAAACCAA
TTTAGCAAAGTTTCAGCTCCAGGGTGACCATCAAGTCCCCCGGTTGTTAT
AAACCATTTGCCTGATGCCGCGTCATAATTATCAACTTTCCACAACGGTT
GTTCGTTACAATAGTCACGTCCAGATAGCAACACTGAGAATCTCAAGTTG
AGATCAGTGGATTCTCGGACAATTGTAGAATTGTTATACGGTGACAGTGT
TAATTCGATTCCATTTTGCATATCAGAAGGTAACTGGATAACGTCCAGCG
GACAATATCCGTTTCTGCCACCGTGTAGGCTAACTCCACCACCGCCAGCT
CCCCAGATGGCTGAGACTATGT
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