CN188659

Overview
NameCN188659
Unique NameCN188659
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4852 contig Csv1_Contig4852:7..720. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188659 vs. ExPASy Swiss-Prot
Match: HBP2_CASGL (Hemoglobin-2 OS=Casuarina glauca GN=HBII PE=3 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 8.829e-72
Identity = 134/156 (85.90%), Postives = 146/156 (93.59%), Query Frame = 1
Query:   70 EGRAFTEEQEALVVQSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKPHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEMKPSS 537
            EGR FTEEQEALVV+SW+ MK NAGELGLKFFL+IFEIAPSAQKLFSFL+DSNVPLE+N KLK HAMSVF+MTCESAVQLRKAGKVTVRES+LKKLGA HFK+GV +EHFEVTKF+LLETIKEAVPE WSPEMK+AW EAYD+LVAAIK EMKPSS
Sbjct:    5 EGRGFTEEQEALVVKSWSAMKPNAGELGLKFFLKIFEIAPSAQKLFSFLKDSNVPLERNPKLKSHAMSVFLMTCESAVQLRKAGKVTVRESSLKKLGASHFKHGVADEHFEVTKFALLETIKEAVPETWSPEMKNAWGEAYDKLVAAIKLEMKPSS 160          
BLAST of CN188659 vs. ExPASy Swiss-Prot
Match: HBL1_MEDSA (Non-symbiotic hemoglobin 1 OS=Medicago sativa GN=MHB1 PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 1.967e-71
Identity = 133/154 (86.36%), Postives = 144/154 (93.51%), Query Frame = 1
Query:   76 RAFTEEQEALVVQSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKPHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEMKPSS 537
            + FTEEQEALVV+SWN MKKN+ ELGLK FL+IFEIAPSAQKLFSFL+DS VPLEQN KLKPHAMSVF+MTCESAVQLRK+GKVTVRES+LKKLGA HFKYGVV+EHFEVTKF+LLETIKEAVPEMWSP MK+AW EAYDQLV AIKSEMKPSS
Sbjct:    7 KGFTEEQEALVVKSWNAMKKNSAELGLKLFLKIFEIAPSAQKLFSFLKDSKVPLEQNTKLKPHAMSVFLMTCESAVQLRKSGKVTVRESSLKKLGANHFKYGVVDEHFEVTKFALLETIKEAVPEMWSPAMKNAWGEAYDQLVNAIKSEMKPSS 160          
BLAST of CN188659 vs. ExPASy Swiss-Prot
Match: HBL1_GOSHI (Non-symbiotic hemoglobin 1 OS=Gossypium hirsutum GN=HB1 PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 2.569e-71
Identity = 134/156 (85.90%), Postives = 143/156 (91.67%), Query Frame = 1
Query:   70 EGRAFTEEQEALVVQSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKPHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEMKPSS 537
            EG+ FTEEQEALVV+SW VMKK   ELGLKFFL+IFEIAPSA+KLFSFLRDSNVPLEQN KLKPHAMSVFVMTCESAVQLRKAGKVTVRES LKKLGA HFKYGVV+EHFEVTKF+LLETIKEAVP+MWS EMK+AW EAYD+LVAAIK EMK  S
Sbjct:    5 EGKVFTEEQEALVVKSWTVMKKKTAELGLKFFLKIFEIAPSAKKLFSFLRDSNVPLEQNTKLKPHAMSVFVMTCESAVQLRKAGKVTVRESNLKKLGATHFKYGVVDEHFEVTKFALLETIKEAVPDMWSDEMKNAWGEAYDRLVAAIKIEMKACS 160          
BLAST of CN188659 vs. ExPASy Swiss-Prot
Match: HBL_TRETO (Non-symbiotic hemoglobin OS=Trema tomentosa GN=GLB1 PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.841e-69
Identity = 131/161 (81.37%), Postives = 147/161 (91.30%), Query Frame = 1
Query:   55 MANINEGRAFTEEQEALVVQSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKPHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEMKPSS 537
            M++    + FTEEQEALVV+SW VMKKN+ ELGLKFFL+IFEIAPSA+ LFS+L+DS +PLEQN KLKPHAM+VFVMTCESAVQLRKAGKVTVRES LK+LGA+HFK GVVNEHFE T+F+LLETIKEAVPEMWSPEMK+AW EAYDQLVAAIKSEMKPSS
Sbjct:    1 MSSSEVDKVFTEEQEALVVKSWAVMKKNSAELGLKFFLKIFEIAPSAKNLFSYLKDSPIPLEQNPKLKPHAMTVFVMTCESAVQLRKAGKVTVRESNLKRLGAIHFKNGVVNEHFE-TRFALLETIKEAVPEMWSPEMKNAWGEAYDQLVAAIKSEMKPSS 160          
BLAST of CN188659 vs. ExPASy Swiss-Prot
Match: HBPL_PARRI (Non-legume hemoglobin OS=Parasponia rigida PE=1 SV=2)

HSP 1 Score: 255.373 bits (651), Expect = 2.250e-67
Identity = 125/161 (77.64%), Postives = 144/161 (89.44%), Query Frame = 1
Query:   55 MANINEGRAFTEEQEALVVQSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKPHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEMKPSS 537
            M++    + FTEEQEALVV++W VMKKN+ ELGL+FFL+IFEIAPSA+ LFS+L+DS VPLEQN KLKPHA +VFVMTCESAVQLRKAGK TV+ES LK++GA+HFK GVVNEHFEVT+F+LLETIKEAVPEMWSPEMK+AW  AYDQLVAAIK EMKPSS
Sbjct:    1 MSSSEVNKVFTEEQEALVVKAWAVMKKNSAELGLQFFLKIFEIAPSAKNLFSYLKDSPVPLEQNPKLKPHATTVFVMTCESAVQLRKAGKATVKESDLKRIGAIHFKTGVVNEHFEVTRFALLETIKEAVPEMWSPEMKNAWGVAYDQLVAAIKFEMKPSS 161          
BLAST of CN188659 vs. ExPASy Swiss-Prot
Match: HBPL_PARAD (Non-legume hemoglobin OS=Parasponia andersonii PE=1 SV=2)

HSP 1 Score: 255.373 bits (651), Expect = 2.250e-67
Identity = 125/161 (77.64%), Postives = 144/161 (89.44%), Query Frame = 1
Query:   55 MANINEGRAFTEEQEALVVQSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKPHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEMKPSS 537
            M++    + FTEEQEALVV++W VMKKN+ ELGL+FFL+IFEIAPSA+ LFS+L+DS VPLEQN KLKPHA +VFVMTCESAVQLRKAGK TV+ES LK++GA+HFK GVVNEHFEVT+F+LLETIKEAVPEMWSPEMK+AW  AYDQLVAAIK EMKPSS
Sbjct:    1 MSSSEVNKVFTEEQEALVVKAWAVMKKNSAELGLQFFLKIFEIAPSAKNLFSYLKDSPVPLEQNPKLKPHATTVFVMTCESAVQLRKAGKATVKESDLKRIGAIHFKTGVVNEHFEVTRFALLETIKEAVPEMWSPEMKNAWGVAYDQLVAAIKFEMKPSS 161          
BLAST of CN188659 vs. ExPASy Swiss-Prot
Match: HBL1_ARATH (Non-symbiotic hemoglobin 1 OS=Arabidopsis thaliana GN=AHB1 PE=1 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 3.041e-64
Identity = 121/158 (76.58%), Postives = 140/158 (88.61%), Query Frame = 1
Query:   67 NEGR-AFTEEQEALVVQSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKPHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVPEMWSPEMKSAWSEAYDQLVAAIKSEMKPSS 537
            +EG+  FTEEQEALVV+SW+VMKKN+ ELGLK F++IFEIAP+ +K+FSFLRDS +P EQN KLKPHAMSVFVM CESAVQLRK GKVTVRE+TLK+LGA H KYGVV+EHFEV K++LLETIKEAVPEMWSPEMK AW +AYD LVAAIK+EM  S+
Sbjct:    3 SEGKIVFTEEQEALVVKSWSVMKKNSAELGLKLFIKIFEIAPTTKKMFSFLRDSPIPAEQNPKLKPHAMSVFVMCCESAVQLRKTGKVTVRETTLKRLGASHSKYGVVDEHFEVAKYALLETIKEAVPEMWSPEMKVAWGQAYDHLVAAIKAEMNLSN 160          
BLAST of CN188659 vs. ExPASy Swiss-Prot
Match: HBL2_ORYSJ (Non-symbiotic hemoglobin 2 OS=Oryza sativa subsp. japonica GN=HB2 PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.082e-61
Identity = 114/153 (74.51%), Postives = 140/153 (91.50%), Query Frame = 1
Query:   79 AFTEEQEALVVQSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKPHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVP-EMWSPEMKSAWSEAYDQLVAAIKSEMKPS 534
            +F+EEQEALV++SW +MKK++  +GL+FFL+IFE+APSA ++FSFLR+S+VPLE+N KLK HAMSVFVMTCE+A QLRKAGKVTVR++TLK+LGA HFKYGV + HFEVT+F+LLETIKEAVP +MWSP MKSAWSEAY+QLVAAIK EMKP+
Sbjct:   16 SFSEEQEALVLKSWAIMKKDSANIGLRFFLKIFEVAPSASQMFSFLRNSDVPLEKNPKLKTHAMSVFVMTCEAAAQLRKAGKVTVRDTTLKRLGATHFKYGVGDAHFEVTRFALLETIKEAVPVDMWSPAMKSAWSEAYNQLVAAIKQEMKPA 168          
BLAST of CN188659 vs. ExPASy Swiss-Prot
Match: HBL_MAIZE (Non-symbiotic hemoglobin OS=Zea mays GN=HB PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.480e-60
Identity = 116/164 (70.73%), Postives = 141/164 (85.98%), Query Frame = 1
Query:   52 SMANINEGRA-FTEEQEALVVQSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKPHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVP-EMWSPEMKSAWSEAYDQLVAAIKSEMKPSS 537
            ++A  ++G   F EEQEALV++SW VMKK+A  LGL+FFL++FEIAPSA+++FSFLRDS+VPLE+N KLK HAMSVFVMTCE+A QLRKAGKVTVRE+TLK+LGA H +YGV + HFEVT F+LLETIKEA+P +MWS EMK AW+EAY QLVAAIK EMKP +
Sbjct:    2 ALAEADDGAVVFGEEQEALVLKSWAVMKKDAANLGLRFFLKVFEIAPSAEQMFSFLRDSDVPLEKNPKLKTHAMSVFVMTCEAAAQLRKAGKVTVRETTLKRLGATHLRYGVADGHFEVTGFALLETIKEALPADMWSLEMKKAWAEAYSQLVAAIKREMKPDA 165          
BLAST of CN188659 vs. ExPASy Swiss-Prot
Match: HBL_ZEAMP (Non-symbiotic hemoglobin OS=Zea mays subsp. parviglumis GN=HB PE=1 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.545e-60
Identity = 116/164 (70.73%), Postives = 141/164 (85.98%), Query Frame = 1
Query:   52 SMANINEGRA-FTEEQEALVVQSWNVMKKNAGELGLKFFLRIFEIAPSAQKLFSFLRDSNVPLEQNQKLKPHAMSVFVMTCESAVQLRKAGKVTVRESTLKKLGAVHFKYGVVNEHFEVTKFSLLETIKEAVP-EMWSPEMKSAWSEAYDQLVAAIKSEMKPSS 537
            ++A  ++G   F EEQEALV++SW VMKK+A  LGL+FFL++FEIAPSA+++FSFLRDS+VPLE+N KLK HAMSVFVMTCE+A QLRKAGKVTVRE+TLK+LGA H +YGV + HFEVT F+LLETIKEA+P +MWS EMK AW+EAY QLVAAIK EMKP +
Sbjct:    2 ALAEADDGAVVFGEEQEALVLKSWAVMKKDAANLGLRFFLKVFEIAPSAKQMFSFLRDSDVPLEKNPKLKTHAMSVFVMTCEAAAQLRKAGKVTVRETTLKRLGATHLRYGVADGHFEVTGFALLETIKEALPADMWSLEMKKAWAEAYSQLVAAIKREMKPDA 165          
The following BLAST results are available for this feature:
BLAST of CN188659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
HBP2_CASGL8.829e-7285.90Hemoglobin-2 OS=Casuarina glauca GN=HBII PE=3 SV=1[more]
HBL1_MEDSA1.967e-7186.36Non-symbiotic hemoglobin 1 OS=Medicago sativa GN=M... [more]
HBL1_GOSHI2.569e-7185.90Non-symbiotic hemoglobin 1 OS=Gossypium hirsutum G... [more]
HBL_TRETO1.841e-6981.37Non-symbiotic hemoglobin OS=Trema tomentosa GN=GLB... [more]
HBPL_PARRI2.250e-6777.64Non-legume hemoglobin OS=Parasponia rigida PE=1 SV... [more]
HBPL_PARAD2.250e-6777.64Non-legume hemoglobin OS=Parasponia andersonii PE=... [more]
HBL1_ARATH3.041e-6476.58Non-symbiotic hemoglobin 1 OS=Arabidopsis thaliana... [more]
HBL2_ORYSJ1.082e-6174.51Non-symbiotic hemoglobin 2 OS=Oryza sativa subsp. ... [more]
HBL_MAIZE3.480e-6070.73Non-symbiotic hemoglobin OS=Zea mays GN=HB PE=2 SV... [more]
HBL_ZEAMP4.545e-6070.73Non-symbiotic hemoglobin OS=Zea mays subsp. parvig... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006I08_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006I08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188659 ID=CN188659; Name=CN188659; organism=Citrus sinensis; type=EST; length=714bp
CATTAAGGGCATTTTGGGTATNANATTCAATCCTCAGGTGCCTAAAAGAA
ATCAATGGCCAACATTAACGAAGGTAGAGCCTTTACTGAAGAGCAAGAAG
CTTTAGTTGTCCAGTCATGGAATGTAATGAAGAAGAATGCTGGAGAATTG
GGTCTTAAATTCTTCTTGAGGATCTTTGAGATTGCACCATCAGCCCAAAA
GCTGTTCTCATTCTTGAGAGACTCAAATGTGCCTCTAGAGCAGAACCAGA
AGCTCAAGCCCCACGCCATGTCTGTTTTTGTTATGACGTGTGAATCAGCA
GTGCAACTGAGGAAAGCAGGCAAAGTGACAGTAAGAGAATCAACTCTAAA
AAAATTAGGAGCTGTCCACTTCAAATATGGTGTTGTTAATGAGCATTTTG
AGGTCACAAAATTTTCACTACTGGAAACCATAAAAGAGGCAGTACCAGAG
ATGTGGTCGCCAGAAATGAAGAGTGCCTGGTCAGAAGCTTACGATCAATT
GGTTGCAGCCATTAAGTCGGAGATGAAGCCCTCCTCTTAGAGTTTCCTGA
ACAAATTTCTCTTCCCCTGTAATATTAAAGAATTTCAAAAAGAGCATTGT
TTATTTGTTAGTCTTTACATTGGTACCCACGTGTGTTTCTTGTGCCTTTT
TGTATAATCACTTGTGTTCAACTCTTGAATCTTAATAACAAAAGTTTGTT
CCTAATGTTTGCAT
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