CN181646
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_BACSK (Ribosome-recycling factor OS=Bacillus clausii (strain KSM-K16) GN=frr PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.733e-14 Identity = 41/85 (48.24%), Postives = 56/85 (65.88%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGL 720 +K A ++M+ AI LSREL KLR GRA+P +LD + VE G + PLN LA V+V +++ L I PYD + +E AI+ S LGL Sbjct: 5 IKADAKTRMDKAIDVLSRELAKLRAGRANPALLDRVTVEYYGAQTPLNQLASVTVPEARLLLITPYDKTAVASIEKAILKSDLGL 89
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_SERP5 (Ribosome-recycling factor OS=Serratia proteamaculans (strain 568) GN=frr PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.264e-14 Identity = 41/86 (47.67%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 +++ A S+ME ++ A +++K+RTGRASP +LD I+VE G PL LA V+V DS+TL IN +D + +E AI+SS LGLN Sbjct: 5 IRKDADSRMEKSVEAFKNQISKIRTGRASPSILDGIMVEYYGASTPLRQLASVTVEDSRTLKINVFDRSISAAVEKAIMSSDLGLN 90
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_SACD2 (Ribosome-recycling factor OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=frr PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 8.602e-14 Identity = 39/86 (45.35%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 +K + +M AI AL K+RTGRA P +LD ++V G PL+ +A V+VLD++TLSI+P++ N + E+E AI+ S LGLN Sbjct: 5 IKSDSEERMSRAIEALGTHFNKIRTGRAHPSILDGVMVSYYGSATPLSQVANVTVLDARTLSISPWEKNIVPEIEKAIMKSDLGLN 90
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_BACHD (Ribosome-recycling factor OS=Bacillus halodurans GN=frr PE=3 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 1.123e-13 Identity = 41/85 (48.24%), Postives = 54/85 (63.53%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGL 720 V A +M A AL REL KLR GRA+P MLD I VE G + PLN LA +SV +++ L I P+D +++ ++E AI S LGL Sbjct: 5 VLNDAEQRMTKATEALGRELAKLRAGRANPAMLDRITVEYYGAETPLNQLATISVPEARLLVIQPFDKSSISDIERAIQKSDLGL 89
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_KLEP3 (Ribosome-recycling factor OS=Klebsiella pneumoniae (strain 342) GN=frr PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.467e-13 Identity = 39/86 (45.35%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 +++ A +ME + A +++K+RTGRASP +LD I+VE G PL LA V+V DS+TL IN +D + +E AI++S LGLN Sbjct: 5 IRKDAEIRMEKCVEAFKNQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMSAAVEKAIMASDLGLN 90
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_GEOTN (Ribosome-recycling factor OS=Geobacillus thermodenitrificans (strain NG80-2) GN=frr PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.916e-13 Identity = 37/85 (43.53%), Postives = 58/85 (68.24%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGL 720 V + A +M+ A+ A SREL +R GRA+ G+L+ + V+ GV P+N LA +SV +++ L I PYD + +KE+E AI++S LG+ Sbjct: 5 VIQQAKEKMDKAVQAFSRELATVRAGRANAGLLEKVTVDYYGVATPINQLATISVPEARMLVIQPYDKSVIKEMEKAILASDLGV 89
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_GEOKA (Ribosome-recycling factor OS=Geobacillus kaustophilus GN=frr PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.916e-13 Identity = 37/85 (43.53%), Postives = 58/85 (68.24%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGL 720 V + A +M+ A+ A +REL +R GRA+ G+L+ + V+ GV P+N LA +SV +++ L I PYD + +KE+E AI++S LGL Sbjct: 5 VIQQAKEKMDKAVQAFTRELASIRAGRANAGLLEKVTVDYYGVPTPINQLASISVPEARLLVIQPYDKSAIKEMEKAILASDLGL 89
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_THIDA (Ribosome-recycling factor OS=Thiobacillus denitrificans (strain ATCC 25259) GN=frr PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13 Identity = 36/86 (41.86%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 +K++A +M + AL +L K+RTGRA G+LDH++V+ G P+ +A VS++DS+TL + PY+ N + ++E AI LGLN Sbjct: 9 IKQSAEQKMGKTLEALKNDLAKVRTGRAHAGILDHVLVDYYGNPTPVPQVANVSLVDSRTLGVQPYEKNMVGKIEKAIRDGDLGLN 94
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_PSEPW (Ribosome-recycling factor OS=Pseudomonas putida (strain W619) GN=frr PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13 Identity = 40/86 (46.51%), Postives = 55/86 (63.95%), Query Frame = 1 Query: 466 VKETAVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 +K+ A +M +I AL R L +RTGRA P +LD + V G +MPLN +A VSV D++TL I +D N +E AI++S LGLN Sbjct: 5 IKKDAQDRMGKSIEALGRNLASIRTGRAHPSILDSVKVPAWGSEMPLNQVAAVSVEDARTLKIVAHDKNLSAAIEKAILTSDLGLN 90
BLAST of CN181646 vs. ExPASy Swiss-Prot
Match: RRF_DESVM (Ribosome-recycling factor OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=frr PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13 Identity = 40/82 (48.78%), Postives = 56/82 (68.29%), Query Frame = 1 Query: 478 AVSQMEAAIVALSRELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELESAIVSSPLGLN 723 A +ME A+ +L RE KLRTGRAS ++D+I V+ G P++ LA VSV DS+TL+I P+D + + +E AI+ S LGLN Sbjct: 10 AEERMEKALGSLDREFAKLRTGRASTSLVDNIKVDYYGTPTPISQLASVSVPDSRTLTIQPWDRSAFQLVEKAIMKSDLGLN 91 The following BLAST results are available for this feature:
BLAST of CN181646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 303
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181646 ID=CN181646; Name=CN181646; organism=Citrus sinensis; type=EST; length=723bpback to top |