CN181636

Overview
NameCN181636
Unique NameCN181636
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length617
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181636 vs. ExPASy Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 6.308e-38
Identity = 74/102 (72.55%), Postives = 84/102 (82.35%), Query Frame = 2
Query:   68 PSFATVYNVGESSGWTMGTDYSTWTSGKTFAVGDSLVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVTV 370
            PS ATVY VG++SGW +G DYSTW S KTFAVGDSLVFNYG+G HTVDEV  SDY SCT GN+I++DS+GATTI LK AG HYFICGVPGH   GMKL++ V
Sbjct:   21 PSLATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVDEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKV 122          
BLAST of CN181636 vs. ExPASy Swiss-Prot
Match: BCB2_ARATH (Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.277e-22
Identity = 49/89 (55.06%), Postives = 56/89 (62.92%), Query Frame = 2
Query:  110 WTMGTDYSTWTSGKTFAVGDSLVFNYGSGHTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHC--GSGMKLAVTV 370
            WT G DYS W +GKTF VGD L F YGS HTVD V  + Y+ C   ++  + S G T I LKT G +YFIC  PGHC    GMKLAV V
Sbjct:   36 WTTGVDYSGWATGKTFRVGDILEFKYGSSHTVDVVDKAGYDGCDASSSTENHSDGDTKIDLKTVGINYFICSTPGHCRTNGGMKLAVNV 124          
BLAST of CN181636 vs. ExPASy Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.726e-19
Identity = 47/101 (46.53%), Postives = 63/101 (62.38%), Query Frame = 2
Query:   77 ATVYNVGESSGWT--MGTDYSTWTSGKTFAVGDSLVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVTV 370
            ATV+ VG+S+GWT  +  DY+ W S   F VGDSL+FNY +  H V +V    + SC   +   S +SGA +I LK  GT YF+CG+PGHC  G K+ + V
Sbjct:    1 ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 101          
BLAST of CN181636 vs. ExPASy Swiss-Prot
Match: BABL_LILLO (Chemocyanin OS=Lilium longiflorum PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.492e-18
Identity = 49/98 (50.00%), Postives = 56/98 (57.14%), Query Frame = 2
Query:   77 ATVYNVGESSGWTMGTDYSTWTSGKTFAVGDSLVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVT 367
            + VY VG+  GWT GT  S W +GKTF  GD LVF Y    H V  V    Y SCT         SG   ITL + GT+YFIC VPGHC  G+K+AVT
Sbjct:   30 SVVYTVGDGGGWTFGT--SGWPAGKTFRAGDVLVFKYNPAVHNVVSVPAGGYKSCTASPGSRVFKSGDDRITL-SRGTNYFICSVPGHCQGGLKIAVT 124          
BLAST of CN181636 vs. ExPASy Swiss-Prot
Match: STEL_RHUVE (Stellacyanin OS=Rhus vernicifera PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.755e-17
Identity = 47/103 (45.63%), Postives = 59/103 (57.28%), Query Frame = 2
Query:   80 TVYNVGESSGWTM----GTDYS-TWTSGKTFAVGDSLVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVTV 370
            TVY VG+S+GW +      DY   W S KTF +GD LVF Y    H VD+V+  +Y SC     I S ++G   I LKT G  Y+ICGVP HC  G K+ + V
Sbjct:    1 TVYTVGDSAGWKVPFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQSCNDTTPIASYNTGBBRINLKTVGQKYYICGVPKHCDLGQKVHINV 103          
BLAST of CN181636 vs. ExPASy Swiss-Prot
Match: BCB1_ARATH (Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 9.800e-15
Identity = 43/103 (41.75%), Postives = 58/103 (56.31%), Query Frame = 2
Query:   74 FATVYNVGESSGWTMGTD---YSTWTSGKTFAVGDSLVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVTV 370
            FA  Y+VG+ + WT   D   Y+TW +GKTF VGD L F++ +G H V  VS + + +C     I+  +     I L T G  YFIC V  HC  G KL++TV
Sbjct:   21 FAEDYDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVAVVSEAAFENCEKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITV 123          
BLAST of CN181636 vs. ExPASy Swiss-Prot
Match: BABL_CUCSA (Basic blue protein OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.117e-13
Identity = 42/95 (44.21%), Postives = 51/95 (53.68%), Query Frame = 2
Query:   83 VYNVGESSGWTMGTDYSTWTSGKTFAVGDSLVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAV 364
            VY VG S GWT  T+  +W  GK F  GD L+FNY    H V  V+   +++C         +SG   I L   G  YFIC  PGHC SGMK+AV
Sbjct:    2 VYVVGGSGGWTFNTE--SWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIKLPK-GQSYFICNFPGHCQSGMKIAV 93          
BLAST of CN181636 vs. ExPASy Swiss-Prot
Match: BABL_ARATH (Basic blue protein OS=Arabidopsis thaliana GN=At2g02850 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 4.117e-13
Identity = 42/98 (42.86%), Postives = 50/98 (51.02%), Query Frame = 2
Query:   77 ATVYNVGESSGWTMGTDYSTWTSGKTFAVGDSLVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVT 367
            A  Y VG+S  WT       W  GK F  GD LVFNY    H V +V    YN+C         +SG   ITL + G ++FIC  P HC S MK+AVT
Sbjct:   33 AATYTVGDSGIWTFNA--VGWPKGKHFRAGDVLVFNYNPRMHNVVKVDSGSYNNCKTPTGAKPYTSGKDRITL-SKGQNFFICNFPNHCESDMKIAVT 127          
BLAST of CN181636 vs. ExPASy Swiss-Prot
Match: CPC_CUCSA (Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.198e-12
Identity = 41/107 (38.32%), Postives = 63/107 (58.88%), Query Frame = 2
Query:   77 ATVYNVGESSGWTMGTD---YSTWTSGKTFAVGDSLVFNY-GSGHTVDEV-SGSDYNSCTVGNAITSDSSGATTI----TLKTAGTHYFICGVPGHCGSGMKLAVTV 370
            +TV+ VG+++GW++ +    YS W +GKTF VGDSL FN+  + H V E+ +   +++C   N + SD+    T      L   G HYF+C V  HC +G KL++ V
Sbjct:    2 STVHIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDAC---NFVNSDNDVERTSPVIERLDELGMHYFVCTVGTHCSNGQKLSINV 105          
BLAST of CN181636 vs. ExPASy Swiss-Prot
Match: UMEC_ARMRU (Umecyanin OS=Armoracia rusticana PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.669e-12
Identity = 38/99 (38.38%), Postives = 54/99 (54.55%), Query Frame = 2
Query:   86 YNVGESSGWTMGTD---YSTWTSGKTFAVGDSLVFNYGSG-HTVDEVSGSDYNSCTVGNAITSDSSGATTITLKTAGTHYFICGVPGHCGSGMKLAVTV 370
            Y+VG    W   +D   Y TW +GKTF VGD L F++ +G H V  V+   +++C   N I+  ++    I L T G  Y+IC V  HC  G KL++ V
Sbjct:    3 YDVGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPISHMTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINV 101          
The following BLAST results are available for this feature:
BLAST of CN181636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
BCP_PEA6.308e-3872.55Blue copper protein OS=Pisum sativum PE=2 SV=1[more]
BCB2_ARATH8.277e-2255.06Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 ... [more]
MAVI_CUCPE1.726e-1946.53Mavicyanin OS=Cucurbita pepo PE=1 SV=1[more]
BABL_LILLO2.492e-1850.00Chemocyanin OS=Lilium longiflorum PE=1 SV=1[more]
STEL_RHUVE2.755e-1745.63Stellacyanin OS=Rhus vernicifera PE=1 SV=1[more]
BCB1_ARATH9.800e-1541.75Blue copper protein OS=Arabidopsis thaliana GN=BCB... [more]
BABL_CUCSA4.117e-1344.21Basic blue protein OS=Cucumis sativus PE=1 SV=1[more]
BABL_ARATH4.117e-1342.86Basic blue protein OS=Arabidopsis thaliana GN=At2g... [more]
CPC_CUCSA1.198e-1238.32Cucumber peeling cupredoxin OS=Cucumis sativus PE=... [more]
UMEC_ARMRU2.669e-1238.38Umecyanin OS=Armoracia rusticana PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001E03_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181636 ID=CN181636; Name=CN181636; organism=Citrus sinensis; type=EST; length=617bp
CTCTTAAATGGCAGGAGTTTTCTCTGGGTTGGTTGTTTGTGCAGTTTTAG
TCTTTTGTGTGGTGGTTCCAAGCTTTGCTACAGTTTACAATGTAGGAGAG
TCCTCAGGCTGGACAATGGGTACTGACTATAGCACTTGGACCAGTGGCAA
GACATTTGCTGTTGGTGACAGCCTTGTTTTCAACTATGGAAGTGGGCACA
CTGTTGATGAAGTGAGTGGTAGTGACTACAACTCATGCACCGTGGGAAAT
GCAATCACATCAGACAGTTCAGGTGCCACCACCATCACTCTAAAGACTGC
CGGAACACACTACTTCATTTGTGGTGTCCCTGGTCACTGCGGCAGCGGCA
TGAAGCTTGCCGTCACTGTGGGATCAGGGTCACCAACCGCTTCTCCATCA
GGCTCAGGTTCATCATCTACAGGTGGCTCTGGCGGTTCTTCGCTGCCTTC
TGGCCGCAATACGACAACCACCAAAACTTCACCTTATACACCTGATTTAT
CTTCGGGGGCTAATTTCTCTCCATTTGTTGCTCTAGGAATTACTTTGTGT
TGCATTCTTCATGTTGGTTCTCTCATAAGCTTTCTCCTTGCTGATGACCA
GGATAGAGGCAGTGCTT
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