CN181635

Overview
NameCN181635
Unique NameCN181635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3666 contig Csv1_Contig3666:132..829. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181635 vs. ExPASy Swiss-Prot
Match: TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2)

HSP 1 Score: 328.946 bits (842), Expect = 1.543e-89
Identity = 144/186 (77.42%), Postives = 157/186 (84.41%), Query Frame = -2
Query:  140 AAVPGGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 697
            AAVPGGG+RLDRGQNW +N   GTK AR+W RT C FDGAGRG+CQTGDC GLLQCQA+G PPNTLAE+ALNQF NLDF DIS +DGFNV MEFS  SGGC R I+CTADI  QCPNELR PGGCN PC VFKT+++CCNSG CG T FS+FFK+RCPDAYSYPKDD TS FTCP GTNYKVVFCP
Sbjct:   40 AAVPGGGKRLDRGQNWIINPGAGTKGARVWPRTGCNFDGAGRGKCQTGDCNGLLQCQAFGQPPNTLAEYALNQFNNLDFFDISLVDGFNVAMEFSPTSGGCTRGIKCTADINGQCPNELRAPGGCNNPCTVFKTDQYCCNSGNCGLTNFSKFFKDRCPDAYSYPKDDQTSTFTCPAGTNYKVVFCP 225          
BLAST of CN181635 vs. ExPASy Swiss-Prot
Match: P21_SOYBN (Protein P21 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 6.500e-80
Identity = 130/187 (69.52%), Postives = 153/187 (81.82%), Query Frame = -2
Query:  140 AAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 697
            A+VP GGG +L+ GQ+W ++V  GTK AR+WART C FDG+GRG CQTGDCGG+L C+AYG+PPNTLAE+ LN F NLDF DIS +DGFNVPM+FS  S GC R I CTADI  QCP+EL+  GGCN PC VFKT+++CCNSG CGPT +SRFFK+RCPDAYSYPKDD  S FTC GGT+Y+VVFCP
Sbjct:   16 ASVPVGGGVQLNPGQSWSVDVPAGTKGARVWARTGCNFDGSGRGGCQTGDCGGVLDCKAYGAPPNTLAEYGLNGFNNLDFFDISLVDGFNVPMDFSPTSNGCTRGISCTADINGQCPSELKTQGGCNNPCTVFKTDQYCCNSGSCGPTDYSRFFKQRCPDAYSYPKDDPPSTFTCNGGTDYRVVFCP 202          
BLAST of CN181635 vs. ExPASy Swiss-Prot
Match: PRR1_TOBAC (Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 4.213e-79
Identity = 132/188 (70.21%), Postives = 150/188 (79.79%), Query Frame = -2
Query:  140 AAVPGGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNS--GKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 697
            AA PGGGRRLD GQ+W +NVNPGT  ARIW RTNC FDG+GRG C+TGDC G+L+CQ YG  PNTLAEFALNQ  N DF+DIS +DGFN+PMEFS  +GGC R +RCTA I  QCP +L+  GGCN PC V KT E+CC +  G CGPT  SRFFKERCPDAYSYP+DD TS+FTCP GTNY+VVFCP
Sbjct:   41 AASPGGGRRLDSGQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYGKAPNTLAEFALNQ-PNQDFVDISLVDGFNIPMEFSPTNGGC-RNLRCTAPINEQCPAQLKTQGGCNNPCTVIKTNEYCCTNGPGSCGPTDLSRFFKERCPDAYSYPQDDPTSLFTCPSGTNYRVVFCP 226          
BLAST of CN181635 vs. ExPASy Swiss-Prot
Match: PRR2_TOBAC (Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 5.150e-77
Identity = 129/188 (68.62%), Postives = 148/188 (78.72%), Query Frame = -2
Query:  140 AAVPGGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNS--GKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 697
            AA PGGGR+L+ GQ+W +NVNPGT  ARIW RTNC FDG+GRG C+TGDC G+L+CQ YG PPNTLAEFALNQ  N DF+DIS +DGFN+PMEFS  +GGC R +RCTA I  QCP +L+  GGCN PC V KT E CC +  G CGPT  SRFFK RCPDAYSYP+DD  S+FTCP GTNY+VVFCP
Sbjct:   41 AASPGGGRQLNSGQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYGKPPNTLAEFALNQ-PNQDFVDISLVDGFNIPMEFSPTNGGC-RNLRCTAPINEQCPAQLKTQGGCNNPCTVIKTNEFCCTNGPGSCGPTDLSRFFKARCPDAYSYPQDDPPSLFTCPPGTNYRVVFCP 226          
BLAST of CN181635 vs. ExPASy Swiss-Prot
Match: OSL3_ARATH (Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2)

HSP 1 Score: 284.648 bits (727), Expect = 3.338e-76
Identity = 129/188 (68.62%), Postives = 149/188 (79.26%), Query Frame = -2
Query:  140 AAVPGGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNSGK--CGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 697
            AA PGGGRRLD GQ+W L+V  GTK ARIW RTNC FD +GRGRCQTGDC G LQC  +G PPNTLAE+ALNQF NLDF DIS +DGFN+PMEFS  S  C+R++ CTADI  QCPN LR PGGCN PC VF+T ++CC +G+  C  T++SRFFK+RCPDAYSYP+DD TS FTC   TNY+VVFCP
Sbjct:   38 AASPGGGRRLDAGQSWRLDVAAGTKMARIWGRTNCNFDSSGRGRCQTGDCSGGLQCTGWGQPPNTLAEYALNQFNNLDFYDISLVDGFNIPMEFSPTSSNCHRIL-CTADINGQCPNVLRAPGGCNNPCTVFQTNQYCCTNGQGSCSDTEYSRFFKQRCPDAYSYPQDDPTSTFTCT-NTNYRVVFCP 223          
BLAST of CN181635 vs. ExPASy Swiss-Prot
Match: OS13_SOLCO (Osmotin-like protein OSML13 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 4.820e-75
Identity = 126/185 (68.11%), Postives = 143/185 (77.30%), Query Frame = -2
Query:  140 GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEF--SSVSGGCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCP-GGTNYKVVFCP 685
            GGGRRLDRGQ W +N   GTK ARIW RTNC FDGAGRG CQTGDCGG+LQC  +G PPNTLAE+AL+QF NLDF DIS +DGFN+PM F  ++ SGG    I CTA+I  +CP  LRVPGGCN PC  F  +++CC  G CGPT  SRFFK+RCPDAYSYP+DD TS FTCP G TNY+VVFCP
Sbjct:   42 GGGRRLDRGQTWVINAPRGTKMARIWGRTNCNFDGAGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 226          
BLAST of CN181635 vs. ExPASy Swiss-Prot
Match: TPM1_SOLLC (Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 2.392e-74
Identity = 125/185 (67.57%), Postives = 142/185 (76.76%), Query Frame = -2
Query:  140 GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEF--SSVSGGCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCP-GGTNYKVVFCP 685
            GGGRRLDRGQ W +N   GTK ARIW RTNC FDG GRG CQTGDCGG+LQC  +G PPNTLAE+AL+QF NLDF DIS +DGFN+PM F  ++ SGG    I CTA+I  +CP  LRVPGGCN PC  F  +++CC  G CGPT  SRFFK+RCPDAYSYP+DD TS FTCP G TNY+VVFCP
Sbjct:   34 GGGRRLDRGQTWVINAPRGTKMARIWGRTNCNFDGDGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 218          
BLAST of CN181635 vs. ExPASy Swiss-Prot
Match: OSMO_TOBAC (Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2)

HSP 1 Score: 278.1 bits (710), Expect = 3.124e-74
Identity = 123/185 (66.49%), Postives = 144/185 (77.84%), Query Frame = -2
Query:  140 GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEF--SSVSGGCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGG-TNYKVVFCP 685
            GGGRRLDRGQ W +N   GTK AR+W RTNC F+ AGRG CQTGDCGG+LQC  +G PPNTLAE+AL+QF  LDF DIS +DGFN+PM F  ++ SGG    I CTA+I  +CP ELRVPGGCN PC  F  +++CC  G CGPT FS+FFK+RCPDAYSYP+DD TS FTCPGG TNY+V+FCP
Sbjct:   42 GGGRRLDRGQTWVINAPRGTKMARVWGRTNCNFNAAGRGTCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSGLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPRELRVPGGCNNPCTTFGGQQYCCTQGPCGPTFFSKFFKQRCPDAYSYPQDDPTSTFTCPGGSTNYRVIFCP 226          
BLAST of CN181635 vs. ExPASy Swiss-Prot
Match: NP24_SOLLC (Protein NP24 OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 272.322 bits (695), Expect = 1.714e-72
Identity = 121/185 (65.41%), Postives = 142/185 (76.76%), Query Frame = -2
Query:  140 GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSV--SGGCNRVIRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGG-TNYKVVFCP 685
            GGGRRL+RGQ W +N   GTK ARIW RT C F+ AGRG CQTGDCGG+LQC  +G PPNTLAE+AL+QF NLDF DIS +DGFN+PM F+    SGG    I CTA+I  +CP  L+VPGGCN PC  F  +++CC  G CGPT+ S+FFK+RCPDAYSYP+DD TS FTCPGG TNY+VVFCP
Sbjct:   42 GGGRRLNRGQTWVINAPRGTKMARIWGRTGCNFNAAGRGTCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSGGKCHAIHCTANINGECPRALKVPGGCNNPCTTFGGQQYCCTQGPCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPGGSTNYRVVFCP 226          
BLAST of CN181635 vs. ExPASy Swiss-Prot
Match: OLPA_TOBAC (Osmotin-like protein OS=Nicotiana tabacum GN=OLPA PE=1 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 3.233e-71
Identity = 123/190 (64.74%), Postives = 144/190 (75.79%), Query Frame = -2
Query:  140 AAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRV--IRCTADIVRQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPG-GTNYKVVFCP 697
            AA P GGGRRL+RGQ+W     PGTK ARIW RTNC FDGAGRG CQTGDCGG+L+C+ +G PPNTLAE+ALNQF NLDF DIS IDGFN+PM F     G  +   I+CTA+I  +CP  LRVPGGCN PC  F  +++CC  G CGPT+ SR+FK+RCPDAYSYP+DD TS FTC    T+YKV+FCP
Sbjct:   38 AATPVGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCP 227          
The following BLAST results are available for this feature:
BLAST of CN181635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
TLP_ACTDE1.543e-8977.42Thaumatin-like protein OS=Actinidia deliciosa GN=t... [more]
P21_SOYBN6.500e-8069.52Protein P21 OS=Glycine max PE=1 SV=1[more]
PRR1_TOBAC4.213e-7970.21Pathogenesis-related protein R major form OS=Nicot... [more]
PRR2_TOBAC5.150e-7768.62Pathogenesis-related protein R minor form OS=Nicot... [more]
OSL3_ARATH3.338e-7668.62Osmotin-like protein OSM34 OS=Arabidopsis thaliana... [more]
OS13_SOLCO4.820e-7568.11Osmotin-like protein OSML13 OS=Solanum commersonii... [more]
TPM1_SOLLC2.392e-7467.57Osmotin-like protein TPM-1 (Fragment) OS=Solanum l... [more]
OSMO_TOBAC3.124e-7466.49Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2[more]
NP24_SOLLC1.714e-7265.41Protein NP24 OS=Solanum lycopersicum PE=1 SV=2[more]
OLPA_TOBAC3.233e-7164.74Osmotin-like protein OS=Nicotiana tabacum GN=OLPA ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001E02_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181635 ID=CN181635; Name=CN181635; organism=Citrus sinensis; type=EST; length=698bp
GAGGATTTATTAATGTGACGCGGCTTGAAGCCACAAAGGCAAATTAAAGC
CTTATTCCTTACACATAGATTGCAGCGACCATACAACGTATAGCAGATAA
TTCCAACCAACAAATGATAGGCAGCTGACTCAGTCTTCACGGGCAGAACA
CAACCTTATAATTAGTCCCACCAGGACAAGTGAAAACGCTTGTTGCATCA
TCTTTAGGGTAACTATAAGCATCCGGGCACCTTTCCTTGAAAAACCTGGA
GAATTTTGTAGGTCCACATTTGCCTGAATTGCAACAGTGCTCTTCGGTCT
TGAACACGGGACATGGCCCATTACATCCTCCTGGAACCCTCAATTCATTC
GGGCACTGCCTGACAATATCAGCCGTACATCTAATCACACGGTTGCATCC
TCCGGACACCGAACTGAATTCCATAGGAACATTAAACCCATCAATGTTCG
AAATATCAATAAAATCCAAGTTTTGGAACTGGTTTAGTGCAAATTCAGCT
AAGGTGTTGGGGGGTGAGCCATAGGCTTGACATTGGAGTAGTCCCCCACA
GTCACCAGTCTGGCACCGCCCGCGCCCGGCTCCATCGAATTGGCAGTTGG
TCCTAGCCCAGATGCGGGCTGCCTTGGTGCCGGGGTTGACATTAAGGGGC
CAGTTTTGGCCCCGGTCGAGTCTCCTGCCTCCACCTGGCACTGCTGCA
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