CN188652
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_ARATH (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2) HSP 1 Score: 318.161 bits (814), Expect = 2.656e-86 Identity = 159/194 (81.96%), Postives = 177/194 (91.24%), Query Frame = 3 Query: 108 MWGIIRQKVAAGGGSPVARIRPVVSNLRNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 M GI+RQ+ A G S + R R + + R+Y++ K+M VR+ALNSA+DEEMSADPKVF+MGEEVG+YQGAYKI+KGLLEKYGPERV DTPITEAGFTGIGVGAAY GLKPVVEFMTFNFSMQAIDHIINSAAKSNYMS+GQI+VPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVL+PYS+EDARGLLKAA Sbjct: 1 MLGILRQR-AIDGASTLRRTRFALVSARSYAAGAKEMTVRDALNSAIDEEMSADPKVFVMGEEVGQYQGAYKITKGLLEKYGPERVYDTPITEAGFTGIGVGAAYAGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQINVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLAPYSAEDARGLLKAA 193
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_PEA (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 1.277e-80 Identity = 157/194 (80.93%), Postives = 166/194 (85.57%), Query Frame = 3 Query: 108 MWGIIRQKVAAGGGSPVARIRPVVSNLRNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 M G+IR K IRP S R +SSA KQM VR+ALNSALD EMSAD KVFLMGEEVGEYQGAYK++KGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMS+GQISVPIVFRG NG AAGVGAQHS CYA+WY S PGLKVL P+S+EDARGLLKAA Sbjct: 1 MLGVIRNKT----------IRPSFSAFRFFSSA-KQMTVRDALNSALDVEMSADSKVFLMGEEVGEYQGAYKVTKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQISVPIVFRGLNGDAAGVGAQHSHCYASWYGSCPGLKVLVPHSAEDARGLLKAA 183
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_SCHPO (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Schizosaccharomyces pombe GN=pdb1 PE=2 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 2.857e-64 Identity = 116/164 (70.73%), Postives = 141/164 (85.98%), Query Frame = 3 Query: 198 SSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 S+ VK+M VR+ALNSA++EEM D +VFL+GEEV +Y GAYKIS+GLL+K+GP+RV+DTPITE GFTG+ GAA+ GL+P+ EFMTFNFSMQAIDHI+NSAA++ YMS G + PIVFRGPNG AA V AQHSQ +A WY S+PGLKV+SPYS+EDARGLLKAA Sbjct: 32 SNGVKEMTVRDALNSAMEEEMKRDDRVFLIGEEVAQYNGAYKISRGLLDKFGPKRVIDTPITEMGFTGLATGAAFAGLRPICEFMTFNFSMQAIDHIVNSAARTLYMSGGIQACPIVFRGPNGPAAAVAAQHSQHFAPWYGSIPGLKVVSPYSAEDARGLLKAA 195
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_YEAST (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=PDB1 PE=1 SV=2) HSP 1 Score: 241.121 bits (614), Expect = 4.126e-63 Identity = 117/180 (65.00%), Postives = 143/180 (79.44%), Query Frame = 3 Query: 150 SPVARIRPVVSNLRNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 +P + +RP + S+ K M VREALNSA+ EE+ D VFL+GEEV +Y GAYK+SKGLL+++G RV+DTPITE GFTG+ VGAA GLKP+VEFM+FNFSMQAIDH++NSAAK++YMS G +VFRGPNGAA GVGAQHSQ ++ WY S+PGLKVL PYS+EDARGLLKAA Sbjct: 17 APTSFVRPSAAAAALRFSSTKTMTVREALNSAMAEELDRDDDVFLIGEEVAQYNGAYKVSKGLLDRFGERRVVDTPITEYGFTGLAVGAALKGLKPIVEFMSFNFSMQAIDHVVNSAAKTHYMSGGTQKCQMVFRGPNGAAVGVGAQHSQDFSPWYGSIPGLKVLVPYSAEDARGLLKAA 196
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_DICDI (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Dictyostelium discoideum GN=pdhB PE=1 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 4.126e-63 Identity = 111/162 (68.52%), Postives = 140/162 (86.42%), Query Frame = 3 Query: 204 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 A K++ VR+A+NSALDEE++ D KVF+MGEEV +Y GAYKI+KGL +KYG +R++DTPITEAGF GIGVGAA G +P++EFMTFNF+MQAIDHIINS+AK++YMS G++ PIV+RGPNG VGAQHSQC+AAWY SVPGLKV++P+S+ D RGLLK+A Sbjct: 25 ATKEVTVRDAINSALDEELARDEKVFIMGEEVAQYNGAYKITKGLFDKYGGDRIIDTPITEAGFAGIGVGAAMAGTRPIIEFMTFNFAMQAIDHIINSSAKTHYMSGGKVFNPIVWRGPNGPPTAVGAQHSQCFAAWYGSVPGLKVVAPWSAADHRGLLKSA 186
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_CAEEL (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Caenorhabditis elegans GN=C04C3.3 PE=1 SV=2) HSP 1 Score: 239.195 bits (609), Expect = 1.568e-62 Identity = 116/162 (71.60%), Postives = 137/162 (84.57%), Query Frame = 3 Query: 204 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 A M VR+ALN A+DEE+ D +VFLMGEEV +Y GAYKISKGL +K+G +RV+DTPITE GF GI VGAA+ GL+P+ EFMTFNFSMQAID IINSAAK+ YMS+G++ VPIVFRGPNGAAAGV AQHSQ ++AWYA PGLKV+ PYS+EDA+GLLKAA Sbjct: 21 AASTMTVRDALNQAMDEEIKRDDRVFLMGEEVAQYDGAYKISKGLWKKHGDKRVVDTPITEMGFAGIAVGAAFAGLRPICEFMTFNFSMQAIDQIINSAAKTYYMSAGRVPVPIVFRGPNGAAAGVAAQHSQDFSAWYAHCPGLKVVCPYSAEDAKGLLKAA 182
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_BOVIN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Bos taurus GN=PDHB PE=1 SV=2) HSP 1 Score: 235.728 bits (600), Expect = 1.733e-61 Identity = 111/162 (68.52%), Postives = 135/162 (83.33%), Query Frame = 3 Query: 204 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 A Q+ VREA+N +DEE+ D KVFL+GEEV +Y GAYK+S+GL +KYG +R++DTPI+E GF GI VGAA GL+P+ EFMTFNFSMQAID +INSAAK+ YMS G SVPIVFRGPNGA+AGV AQHSQC+AAWY PGLKV+SP+SSEDA+GL+K+A Sbjct: 29 AALQVTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQSVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWSSEDAKGLIKSA 190
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_RAT (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus GN=Pdhb PE=1 SV=2) HSP 1 Score: 233.417 bits (594), Expect = 8.603e-61 Identity = 109/162 (67.28%), Postives = 135/162 (83.33%), Query Frame = 3 Query: 204 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 A Q+ VREA+N +DEE+ D KVFL+GEEV +Y GAYK+S+GL +KYG +R++DTPI+E GF GI VGAA GL+P+ EFMTFNFSMQAID +INSAAK+ YMS+G VPIVFRGPNGA+AGV AQHSQC+AAWY PGLKV+SP++SEDA+GL+K+A Sbjct: 29 AAVQLTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSAGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSA 190
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_MOUSE (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Mus musculus GN=Pdhb PE=1 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 8.603e-61 Identity = 109/162 (67.28%), Postives = 135/162 (83.33%), Query Frame = 3 Query: 204 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 A Q+ VREA+N +DEE+ D KVFL+GEEV +Y GAYK+S+GL +KYG +R++DTPI+E GF GI VGAA GL+P+ EFMTFNFSMQAID +INSAAK+ YMS+G VPIVFRGPNGA+AGV AQHSQC+AAWY PGLKV+SP++SEDA+GL+K+A Sbjct: 29 AAVQLTVREAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSAGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSA 190
BLAST of CN188652 vs. ExPASy Swiss-Prot
Match: ODPB_RHIME (Pyruvate dehydrogenase E1 component subunit beta OS=Rhizobium meliloti GN=pdhB PE=3 SV=2) HSP 1 Score: 232.646 bits (592), Expect = 1.467e-60 Identity = 111/158 (70.25%), Postives = 134/158 (84.81%), Query Frame = 3 Query: 216 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAA 689 M VREAL A+ EEM A+ VF+MGEEV EYQGAYK+++GLL+++G RV+DTPITE GF G+GVGAA GL+P+VEFMTFNF+MQAID IINSAAK+ YMS GQ+ PIVFRGP+GAAA V AQHSQCYAAWY+ +PGLKV+ PY++ DA+GLLKAA Sbjct: 138 MTVREALRDAMAEEMRANEDVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPITEHGFAGVGVGAAMTGLRPIVEFMTFNFAMQAIDQIINSAAKTLYMSGGQMGAPIVFRGPSGAAARVAAQHSQCYAAWYSHIPGLKVVMPYTAADAKGLLKAA 295 The following BLAST results are available for this feature:
BLAST of CN188652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188652 ID=CN188652; Name=CN188652; organism=Citrus sinensis; type=EST; length=690bpback to top |