CN188647
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188647 vs. ExPASy Swiss-Prot
Match: TIM50_ARATH (Mitochondrial import inner membrane translocase subunit TIM50 OS=Arabidopsis thaliana GN=TIM50 PE=1 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 8.245e-54 Identity = 103/136 (75.74%), Postives = 119/136 (87.50%), Query Frame = -2 Query: 134 MYVDPVCERLDTNHCIRYRLSRGATKYQDGKHYRDLSKLNRDPAKILYVSGHAFESSLQPENCVPIKPYKLEPDDTALLDLIPFLEYVARNSPADIRAVLASYEKKDIAKEFLERSKDYQRRMQEQRQHNKSFWRR 541 MYV PVCE+LD N IRY+L+RGATKY++GKHYRDLSKLNRDP KIL+VS +AFES+LQPEN VPIKPYKLE DDTAL+DLIPFLEYVARNSPADIR VLAS+E+KDIAKEF++RS +YQ+R Q Q + FWRR Sbjct: 242 MYVLPVCEKLDPNGYIRYKLARGATKYENGKHYRDLSKLNRDPKKILFVSANAFESTLQPENSVPIKPYKLEADDTALVDLIPFLEYVARNSPADIRPVLASFERKDIAKEFIDRSIEYQKRKQGQLGQGR-FWRR 376
BLAST of CN188647 vs. ExPASy Swiss-Prot
Match: TIM50_YEAST (Mitochondrial import inner membrane translocase subunit TIM50 OS=Saccharomyces cerevisiae GN=TIM50 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.566e-20 Identity = 53/119 (44.54%), Postives = 75/119 (63.03%), Query Frame = -2 Query: 191 MYVDPVCERLDTNHC-IRYRLSRGATKYQDGKHYRDLSKLNRDPAKILYVSGHAFESSLQPENCVPIKPYKLEPDDTALLDLIPFLEYVARNSPADIRAVLASYE-KKDIAKEFLERSK 541 MY D + E+LD H + Y L + Y+DG H +DLSKLNRD +K++ + LQPEN +P++P+ E DD L+ LIPFLEY+A D+R +L S+E KK++A+EF R K Sbjct: 243 MYSDKIAEKLDPIHAFVSYNLFKEHCVYKDGVHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPMEPWNGEADD-KLVRLIPFLEYLATQQTKDVRPILNSFEDKKNLAEEFDHRVK 360
BLAST of CN188647 vs. ExPASy Swiss-Prot
Match: TIM50_CANGA (Mitochondrial import inner membrane translocase subunit TIM50 OS=Candida glabrata GN=TIM50 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.566e-20 Identity = 54/137 (39.42%), Postives = 81/137 (59.12%), Query Frame = -2 Query: 140 MYVDPVCERLDTNHC-IRYRLSRGATKYQDGKHYRDLSKLNRDPAKILYVSGHAFESSLQPENCVPIKPYKLEPDDTALLDLIPFLEYVARNSPADIRAVLASY-EKKDIAKEFLERSKDYQRRM-QEQRQHNKSFW 541 MY + + E++D H I Y L + Y+DG H +DLSKLNRD K++ + LQPEN +P+ P+ + DD LL LIPFLEY+A D+R +L SY K+++ EF +R + + + Q+Q++ N S W Sbjct: 249 MYAEKIAEKMDPIHAFISYNLFKEHCVYKDGVHIKDLSKLNRDLKKVMIIDTDENSYKLQPENAIPMDPWDGKADD-KLLRLIPFLEYMATQQVEDVRPILKSYHNKRELPAEFEQRVQKLKNKFEQDQKKKNDSNW 384
BLAST of CN188647 vs. ExPASy Swiss-Prot
Match: TIM50_EMENI (Mitochondrial import inner membrane translocase subunit tim50 OS=Emericella nidulans GN=tim50 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.964e-20 Identity = 50/127 (39.37%), Postives = 76/127 (59.84%), Query Frame = -2 Query: 164 NMYVDPVCERLDTNHCIRYRLSRGATKYQDGKHYRDLSKLNRDPAKILYVSGHAFESSLQPENCVPIKPYKLEPDDTALLDLIPFLEYVARNSPADIRAVLASYEKKDIAKEFLERSKDYQRRMQEQ 544 +M D V +LD IR+ L R AT+Y+DG++ +DLS LNRD +K++ + + LQPEN + + + P D L+ LIPFLEY+A D+R VL S+E + I EF +R K + R +++ Sbjct: 302 SMMADQVLRKLDPYRIIRWPLFREATRYKDGEYIKDLSYLNRDLSKVILIDTKEEHARLQPENAIILDKWNGNPKDKTLVALIPFLEYLAGMGVDDVRTVLKSFEGQSIPIEFAKREKAMRERFEKE 428
BLAST of CN188647 vs. ExPASy Swiss-Prot
Match: TIM50_ASPFU (Mitochondrial import inner membrane translocase subunit tim50 OS=Aspergillus fumigatus GN=tim50 PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 1.735e-19 Identity = 50/133 (37.59%), Postives = 80/133 (60.15%), Query Frame = -2 Query: 158 NMYVDPVCERLDTNHCIRYRLSRGATKYQDGKHYRDLSKLNRDPAKILYVSGHAFESSLQPENCVPIKPYKLEPDDTALLDLIPFLEYVARNSPADIRAVLASYEKKDIAKEFLERSK----DYQRRMQEQRQ 544 +M D V +LD IR+ L R AT+Y+DG++ +DLS LNRD +K++ + + LQPEN + + + +P D L+ LIPFLEY+A D+R VL S+E I EF +R + +++ ++E+R+ Sbjct: 273 SMMADQVLRKLDPYRIIRWPLFREATRYKDGEYIKDLSYLNRDLSKVILIDTKEEHARLQPENAIILDKWLGDPKDKNLVALIPFLEYIAGMGVEDVRPVLKSFEGTSIPVEFAKRERIMREKFEKELEEERK 405
BLAST of CN188647 vs. ExPASy Swiss-Prot
Match: TIM50_GIBZE (Mitochondrial import inner membrane translocase subunit TIM50 OS=Gibberella zeae GN=TIM50 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.125e-18 Identity = 48/128 (37.50%), Postives = 77/128 (60.16%), Query Frame = -2 Query: 149 DPVCERLDTNHCIRYRLSRGATKYQDGKHYRDLSKLNRDPAKILYVSGHAFESSLQPENCVPIKPYKLEPDDTALLDLIPFLEYVARNSPADIRAVLASYEKKDIAKEFLERSKDYQRRMQEQRQHNK 532 +PV +LD I + L R ATK++DG+ +DLS LNRD +K++ + A QP+N + + P+K + DD L++LIPFLEY+ +D+R V+ S++ KDI EF R ++ Q ++ +K Sbjct: 292 EPVMRKLDPFRLILWPLYREATKFEDGEIVKDLSYLNRDLSKVIIIDTKAKHVRNQPDNAIILDPWKGDKDDKNLVNLIPFLEYIHTMQYSDVRKVIKSFDGKDIPTEFARREAIARKEFQAKQLTHK 419
BLAST of CN188647 vs. ExPASy Swiss-Prot
Match: TIM50_DEBHA (Mitochondrial import inner membrane translocase subunit TIM50 OS=Debaryomyces hansenii GN=TIM50 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.582e-18 Identity = 51/131 (38.93%), Postives = 77/131 (58.78%), Query Frame = -2 Query: 155 MYVDPVCERLDTNHC-IRYRLSRGATKYQDGKHYRDLSKLNRDPAKILYVSGHAFESSLQPENCVPIKPYKLEPDDTALLDLIPFLEYVARNSPADIRAVLASY-EKKDIAKEFLERSKDYQRRMQEQRQH 541 MY + +LD H + Y L R A +Y+DGK +DLS LNRD K + + S+QP+N +P+KP+ DDT L+ LIPFLEY+A D+R +L S+ +K +I +EF ER + + ++ +H Sbjct: 241 MYSENTVGKLDPFHAYVSYALFREACRYKDGKLVKDLSLLNRDLGKTVLIDVEEDSWSMQPDNAIPMKPWDGSYDDT-LVKLIPFLEYLATQPVKDVRPILNSFKDKSNIVQEFAEREAKLREQWKKDNKH 370
BLAST of CN188647 vs. ExPASy Swiss-Prot
Match: TIM50_BOVIN (Mitochondrial import inner membrane translocase subunit TIM50 OS=Bos taurus GN=TIMM50 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 9.521e-18 Identity = 49/124 (39.52%), Postives = 72/124 (58.06%), Query Frame = -2 Query: 158 PVCERLDTNHCIRYRLSRGATKYQDGKHYRDLSKLNRDPAKILYVSGHAFESSLQPENCVPIKPYKLEPDDTALLDLIPFLEYVARNSPADIRAVLASYEKKDIAKEFLERSKDYQRRMQEQRQ 529 P+ + +D + I YRL R AT+Y DG H +D+S LNRDPA+++ V LQP N V ++P+ DD LLDL FL+ +A N D+R VL Y + ++ LE K Q R++++ Q Sbjct: 205 PLIDSVDPHGFISYRLFRDATRYMDGHHVKDISCLNRDPARVVVVDCKKEAFRLQPYNGVALRPWDGNSDDRVLLDLSAFLKTIALNGVEDVRTVLEHYA---LEEDPLEAFKQRQSRLEQEEQ 325
BLAST of CN188647 vs. ExPASy Swiss-Prot
Match: TIM50_MOUSE (Mitochondrial import inner membrane translocase subunit TIM50 OS=Mus musculus GN=Timm50 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.624e-17 Identity = 49/124 (39.52%), Postives = 72/124 (58.06%), Query Frame = -2 Query: 158 PVCERLDTNHCIRYRLSRGATKYQDGKHYRDLSKLNRDPAKILYVSGHAFESSLQPENCVPIKPYKLEPDDTALLDLIPFLEYVARNSPADIRAVLASYEKKDIAKEFLERSKDYQRRMQEQRQ 529 P+ + +D + I YRL R AT+Y +G H +D+S LNRDPA+++ V LQP N V ++P+ DD LLDL FL+ +A N D+R VL Y +D + LE K Q R++++ Q Sbjct: 203 PLIDSVDPHGFISYRLFRDATRYMEGHHVKDISCLNRDPARVVVVDCKKEAFRLQPFNGVALRPWDGNSDDRVLLDLSAFLKTIALNQVEDVRTVLEHYALED---DPLEAFKQRQSRLEQEEQ 323
BLAST of CN188647 vs. ExPASy Swiss-Prot
Match: TIM50_PONAB (Mitochondrial import inner membrane translocase subunit TIM50 OS=Pongo abelii GN=TIMM50 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.121e-17 Identity = 49/124 (39.52%), Postives = 71/124 (57.26%), Query Frame = -2 Query: 158 PVCERLDTNHCIRYRLSRGATKYQDGKHYRDLSKLNRDPAKILYVSGHAFESSLQPENCVPIKPYKLEPDDTALLDLIPFLEYVARNSPADIRAVLASYEKKDIAKEFLERSKDYQRRMQEQRQ 529 P+ + +D + I YRL R AT+Y DG H +D+S LNRDPA+++ V LQP N V ++P+ DD LLDL FL+ +A N D+R VL Y +D + L K Q R++++ Q Sbjct: 203 PLIDSVDPHGFISYRLFRDATRYMDGHHVKDISCLNRDPARVVVVDCKKEAFRLQPYNGVALRPWDGNSDDRVLLDLSAFLKTIALNGVEDVRTVLEHYALED---DPLAAFKQRQSRLEQEEQ 323 The following BLAST results are available for this feature:
BLAST of CN188647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188647 ID=CN188647; Name=CN188647; organism=Citrus sinensis; type=EST; length=545bpback to top |