CN181611

Overview
NameCN181611
Unique NameCN181611
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7277 contig Csv1_Contig7277:86..750. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181611 vs. ExPASy Swiss-Prot
Match: AB19A_PRUPE (Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 3.703e-74
Identity = 137/194 (70.62%), Postives = 157/194 (80.93%), Query Frame = 3
Query:    6 SNAMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTMSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLKGILGGT 587
            S+A V DFCVAD K  D PAGY C  PA VT +DFV+SGLG+AGNT +II AAVTPAF AQFP VNGLG+SLARLDL  GGVIP HTHP ASE+LLVV G I AGF++S  NT Y+KTLKKGDIM+FPQGLLHFQVN G   AL F SF+SP+PGLQI DFALF N+L ++L+ QTTFLD A +K+LKG+LGGT
Sbjct:   16 SHASVQDFCVADYKAPDGPAGYSCKKPAKVTINDFVYSGLGIAGNTTNIIKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVIPFHTHPGASEVLLVVQGTIIAGFVASD-NTPYLKTLKKGDIMVFPQGLLHFQVNGGGTPALAFPSFSSPSPGLQILDFALFKNDLPTELIAQTTFLDAAQIKKLKGVLGGT 208          
BLAST of CN181611 vs. ExPASy Swiss-Prot
Match: GL31_ARATH (Germin-like protein subfamily 3 member 1 OS=Arabidopsis thaliana GN=GLP1 PE=1 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 1.838e-73
Identity = 137/195 (70.26%), Postives = 158/195 (81.03%), Query Frame = 3
Query:    6 SNAMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTMSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLKGILGGTG 590
            SNA V DFCVA+LK +++PAGYPC+ P  V A DFVFSGLG  GNT +IINAAVTPAF AQFP +NGLGLS ARLDLA  GVIPMHTHP ASE+L V+ G ITAGF+ SSAN VYV+TLK G +M+FPQGLLHFQ+N+G   A   V+FNS NPGLQI DFALFAN+L ++LV  TTFLD  TVK+LKG+LGGTG
Sbjct:   15 SNASVQDFCVANLKRAETPAGYPCIRPIHVKATDFVFSGLGTPGNTTNIINAAVTPAFAAQFPGLNGLGLSTARLDLAPKGVIPMHTHPGASEVLFVLTGSITAGFV-SSANAVYVQTLKPGQVMVFPQGLLHFQINAGKSSASAVVTFNSANPGLQILDFALFANSLPTELVVGTTFLDATTVKKLKGVLGGTG 208          
BLAST of CN181611 vs. ExPASy Swiss-Prot
Match: AB19B_PRUPE (Auxin-binding protein ABP19b OS=Prunus persica GN=ABP19B PE=3 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 4.527e-72
Identity = 131/194 (67.53%), Postives = 156/194 (80.41%), Query Frame = 3
Query:    6 SNAMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTMSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLKGILGGT 587
            S+A V DFCVAD K  D PAGY C  PA+VT +DFV+SGLG+AGNT +I  AAVTPAF AQFP VNGLG+SLARLDL  GGV+P HTHP ASE+LLVV G I AGF++S  NT Y+KTLKKGDI++FPQGLLHFQVN G   A+ F SF+SP+PGLQI DFALF N+L+++L+ QTT LD   +K+LKG+LGGT
Sbjct:   16 SHASVQDFCVADYKAPDGPAGYSCKKPAIVTVNDFVYSGLGIAGNTTNIFKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVVPFHTHPGASEVLLVVQGTIIAGFVASD-NTPYLKTLKKGDIIVFPQGLLHFQVNGGDTPAIAFPSFSSPSPGLQIVDFALFKNDLATELIAQTTLLDAPQIKKLKGVLGGT 208          
BLAST of CN181611 vs. ExPASy Swiss-Prot
Match: ABP20_PRUPE (Auxin-binding protein ABP20 OS=Prunus persica GN=ABP20 PE=2 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 6.537e-71
Identity = 130/194 (67.01%), Postives = 155/194 (79.90%), Query Frame = 3
Query:    6 SNAMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTMSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLKGILGGT 587
            SNA V DFCVADL   + PAG+ C  PA V  +DFVFSGLG+AGNT +II AAVTPAFVAQFP VNGLG+S+ARLDLA GGV+P HTHP ASE+L+V  G I AGF++S  NT Y++TL+KGDIM+FPQGLLHFQVN G   AL F SF S +PGLQI DFALF N+L ++++ QTTFLD A +K+LKG+LGGT
Sbjct:   21 SNAAVQDFCVADLAAPEGPAGFSCKKPASVKVNDFVFSGLGIAGNTSNIIKAAVTPAFVAQFPGVNGLGISIARLDLAVGGVVPFHTHPGASEVLIVAQGTICAGFVASD-NTPYLQTLEKGDIMVFPQGLLHFQVNGGEAPALAFASFGSASPGLQILDFALFKNDLPTEVIAQTTFLDAAQIKKLKGVLGGT 213          
BLAST of CN181611 vs. ExPASy Swiss-Prot
Match: GL814_ORYSJ (Germin-like protein 8-14 OS=Oryza sativa subsp. japonica GN=GER5 PE=1 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.115e-70
Identity = 128/195 (65.64%), Postives = 154/195 (78.97%), Query Frame = 3
Query:    6 SNAMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTMSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLKGILGGTG 590
            S A+  DFCVADL  SD+PAGYPC   A V A DF + GL  AGNT ++I AAVTPAFV QFP VNGLG+S ARLD+A GGV+P+HTHPAASE+L V  G + AGFI+SS+NTVY +TL  GDIM+FPQGLLH+Q N+G   A+  V+F+ PNPGLQITD+ALFANNL S +VE+ TFLDDA VK+LK +LGG+G
Sbjct:   21 SMALTQDFCVADLTCSDTPAGYPC--KASVGAGDFAYHGLAAAGNTSNLIKAAVTPAFVGQFPGVNGLGISAARLDIAVGGVVPLHTHPAASELLFVTQGTVAAGFITSSSNTVYTRTLYAGDIMVFPQGLLHYQYNAGQSAAVALVAFSGPNPGLQITDYALFANNLPSAIVEKVTFLDDAQVKKLKSVLGGSG 213          
BLAST of CN181611 vs. ExPASy Swiss-Prot
Match: GLP1_BRANA (Germin-like protein 1 OS=Brassica napus GN=GER1 PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 9.439e-70
Identity = 134/195 (68.72%), Postives = 157/195 (80.51%), Query Frame = 3
Query:    6 SNAMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTMSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLKGILGGTG 590
            SN  V DFCVA+LK +++PAGYPC+ P  V A DFVFS LG  GNT +II+AAVTP FVAQFPA+NGLG+S ARLDLA  GVIPMHTHP ASE+L V+ G ITAGFISS AN+VYV+TLK G +M+FPQGLLHFQ+N+G   A   V+F+S +PGLQI DFALFAN LS++LV  TTFL  ATVK LKG+LGGTG
Sbjct:   15 SNDSVQDFCVANLKRAETPAGYPCIRPIHVKASDFVFS-LGTPGNTTNIISAAVTPGFVAQFPALNGLGISTARLDLAPKGVIPMHTHPGASEVLFVLDGSITAGFISS-ANSVYVQTLKPGQVMVFPQGLLHFQINAGKTPAAALVTFSSASPGLQILDFALFANTLSTELVSATTFLPPATVKTLKGVLGGTG 207          
BLAST of CN181611 vs. ExPASy Swiss-Prot
Match: GL33_ARATH (Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana GN=GER3 PE=1 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 1.507e-67
Identity = 130/194 (67.01%), Postives = 151/194 (77.84%), Query Frame = 3
Query:    6 SNAMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTMSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLKGILGGT 587
            S A V DFCVAD K   SP+GY C  P  VT +DF F+GLG AGNT +II AAVTPAF   +  +NGLG+SLARLDLA GGVIP+HTHP ASE+L+V+ G I AGFI SSAN VY+KTL +GD M+FPQGLLHFQ+NSG   AL FV+F S +PGLQI  FALFAN+L S+LVE TTFL DA VK+LKG+LGGT
Sbjct:   18 SFASVQDFCVADPKGPQSPSGYSCKNPDQVTENDFAFTGLGTAGNTSNIIKAAVTPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFI-SSANKVYLKTLNRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQILPFALFANDLPSELVEATTFLSDAEVKKLKGVLGGT 210          
BLAST of CN181611 vs. ExPASy Swiss-Prot
Match: GLP1_SINAL (Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 6.332e-66
Identity = 128/194 (65.98%), Postives = 149/194 (76.80%), Query Frame = 3
Query:    6 SNAMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTMSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLKGILGGT 587
            S A V DFCVAD K   +P+GY C  P  VT +DF FSGLG AGNT ++I AAVTPAF   F  +NGL +SLARLDLA GGVIP+HTHP ASE+L+V+ G I AGFI SSAN VY+KTL +GD M+FPQGLLHFQ+NSG   AL FV+F S +PGLQI  FALFAN+L S+LVE TTFL D  VK+LKG+LGGT
Sbjct:   18 SFASVQDFCVADPKGPQNPSGYSCKNPDQVTENDFAFSGLGKAGNTSNVIKAAVTPAFAPAFAGLNGLDVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFI-SSANKVYLKTLSRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQILPFALFANDLPSELVEATTFLSDEEVKKLKGVLGGT 210          
BLAST of CN181611 vs. ExPASy Swiss-Prot
Match: GL813_ORYSJ (Germin-like protein 8-13 OS=Oryza sativa subsp. japonica GN=Os08g0459700 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.239e-53
Identity = 104/196 (53.06%), Postives = 137/196 (69.90%), Query Frame = 3
Query:    6 SNAMVNDFCVADLKL-SDSPAGYPCVPPAMVTADDFVFSGLGVAGNTMSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLKGILGGTG 590
            + A+  DFCVA+L L +D+P+GY C P A VTA DF    L   G  +   N ++  AFV Q+PAVNGLG+S +R+D+  GGV+P+HTHPA SE+L V+ G + AGFISSS N VY K + KG + +FPQGLLHFQ N+G   A+ F +++S NPGLQI D+ALFANNL +  V + TFL +A V+RLK   GG+G
Sbjct:   24 TTALTQDFCVANLPLGADTPSGYQCRPAATVTAADFYSGALARPGILIRPFNTSLASAFVQQYPAVNGLGISASRVDILPGGVVPLHTHPAGSELLYVLDGALVAGFISSSDNKVYYKEVSKGGMFVFPQGLLHFQYNTGDTTAVAFAAYSSSNPGLQILDYALFANNLPTSYVVKGTFLAEAEVRRLKSKFGGSG 219          
BLAST of CN181611 vs. ExPASy Swiss-Prot
Match: GLP1_IPONI (Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.282e-50
Identity = 115/196 (58.67%), Postives = 133/196 (67.86%), Query Frame = 3
Query:    6 SNAMVNDFCVADLK-LSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTMSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFA-LFANNLSSQLVEQTTFLDDATVKRLKGILGGT 587
            +NA VNDFCVA+     D+P+G+ C   A VTA DFV+SGL   GNT +IINAAVTPAFV QFP V GLG++LARLDLA GGVIPMHTHP ASEIL VV G I A FI SS N VY K L  GD+M+FPQGLL FQ  +G   A G       NPGLQI +F   F      + +  TT LD+AT+K+LK  LGGT
Sbjct:   20 ANASVNDFCVANGPGARDTPSGFVCKNTAKVTAADFVYSGLAKPGNTTNIINAAVTPAFVGQFPGVIGLGVTLARLDLAPGGVIPMHTHPGASEILNVVEGTILAAFI-SSGNKVYEKALYPGDVMVFPQGLLDFQEITGKI-APGLCELRQRNPGLQILEFQHCFPTIFPPKTIAGTTCLDEATIKKLKSGLGGT 213          
The following BLAST results are available for this feature:
BLAST of CN181611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
AB19A_PRUPE3.703e-7470.62Auxin-binding protein ABP19a OS=Prunus persica GN=... [more]
GL31_ARATH1.838e-7370.26Germin-like protein subfamily 3 member 1 OS=Arabid... [more]
AB19B_PRUPE4.527e-7267.53Auxin-binding protein ABP19b OS=Prunus persica GN=... [more]
ABP20_PRUPE6.537e-7167.01Auxin-binding protein ABP20 OS=Prunus persica GN=A... [more]
GL814_ORYSJ1.115e-7065.64Germin-like protein 8-14 OS=Oryza sativa subsp. ja... [more]
GLP1_BRANA9.439e-7068.72Germin-like protein 1 OS=Brassica napus GN=GER1 PE... [more]
GL33_ARATH1.507e-6767.01Germin-like protein subfamily 3 member 3 OS=Arabid... [more]
GLP1_SINAL6.332e-6665.98Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2... [more]
GL813_ORYSJ1.239e-5353.06Germin-like protein 8-13 OS=Oryza sativa subsp. ja... [more]
GLP1_IPONI1.282e-5058.67Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001D09_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181611 ID=CN181611; Name=CN181611; organism=Citrus sinensis; type=EST; length=666bp
GAGGCTCCAATGCTATGGTTAACGACTTCTGCGTCGCTGACCTAAAGCTG
TCGGATAGTCCCGCCGGCTATCCTTGCGTGCCCCCTGCTATGGTTACCGC
TGACGACTTCGTATTTTCGGGCCTCGGCGTGGCCGGAAACACCATGAGTA
TTATCAACGCGGCAGTGACACCTGCATTTGTAGCTCAATTTCCGGCCGTG
AATGGCCTCGGACTCTCCTTGGCACGCCTAGATCTTGCAAAGGGTGGCGT
AATCCCAATGCACACTCATCCAGCTGCTTCCGAAATCCTTCTTGTTGTGC
ATGGCTGCATAACTGCCGGGTTCATTTCCTCTTCAGCTAACACTGTTTAC
GTAAAGACGCTTAAGAAGGGAGATATCATGATCTTTCCACAAGGGTTGTT
GCATTTTCAAGTAAATTCCGGCGCGGACGGAGCCCTCGGTTTTGTTAGCT
TCAACAGCCCGAATCCTGGACTCCAAATCACCGATTTCGCCTTATTTGCC
AACAACTTGTCTTCCCAATTGGTGGAGCAGACCACTTTCCTTGACGATGC
TACGGTGAAGAGGCTCAAGGGTATCCTTGGTGGCACCGGCTAAGCTTATT
AGTTACCACATTCTTCATTTGTAGTTTTGAGTTCTTAATTTCCATTTAGT
TGCTAATGTATTTGAT
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