CN181604

Overview
NameCN181604
Unique NameCN181604
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9372 contig Csv1_Contig9372:209..1026. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.285e-49
Identity = 92/176 (52.27%), Postives = 120/176 (68.18%), Query Frame = -3
Query:  179 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKG-GVDPALIESSMSQMGNLKGQ-FLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVN 700
            GKLD+M+NNAG+       + +  K D ER++ VN +G FLG KHAARVM P ++G I+ TAS  + ++G  S AYT SK+ ++G  +  A ELG++GIRVNCVSP G+AT ++    G+D   IE+ M+   NLKG   LK D IA AAL+LASD+  YVSGQNL VDGG SVVN
Sbjct:   91 GKLDVMFNNAGVSGPPCFRMSECTKEDFERVLAVNLVGPFLGTKHAARVMAPARRGSIISTASLSSSVSGAASHAYTTSKHALVGFTENAAGELGRHGIRVNCVSPAGVATPLARAAMGMDDEAIEAIMANSANLKGAGALKADDIAAAALFLASDDGRYVSGQNLRVDGGLSVVN 266          

HSP 2 Score: 45.4394 bits (106), Expect = 2.285e-49
Identity = 21/42 (50.00%), Postives = 29/42 (69.05%), Query Frame = -2
Query:  696 DKLGEDLADKLGQDVC-YIHCDISNEDEVINLVDTAVSKFGK 818
            D+LG  L  +LG D   Y+HCD++NE +V   VD AV++FGK
Sbjct:   51 DELGASLVAELGPDASSYVHCDVTNEGDVAAAVDHAVARFGK 92          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: ABA2_ARATH (Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.782e-40
Identity = 81/183 (44.26%), Postives = 112/183 (61.20%), Query Frame = -3
Query:  179 NLGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSM-------SQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVN 706
            N G LDI+ NNAG+       I +   S+ E   +VN  G FL  KHAARVM+P++KG I+   S    + G+G  +Y  SK+ +LGL + +AAELGQ+GIRVNCVSPY +AT +++    +    E +        +   NLKG  L  D +ANA L+LASD+S Y+SG NL++DGGF+  N
Sbjct:   96 NFGTLDILINNAGLCGAPCPDIRNYSLSEFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQHGIRVNCVSPYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKGVELTVDDVANAVLFLASDDSRYISGDNLMIDGGFTCTN 278          

HSP 2 Score: 34.2686 bits (77), Expect = 2.782e-40
Identity = 19/48 (39.58%), Postives = 24/48 (50.00%), Query Frame = -2
Query:  699 DLADKLGQDVC-------------YIHCDISNEDEVINLVDTAVSKFG 803
            DL D LG +VC             +IH D+  ED++ N VD AV  FG
Sbjct:   51 DLQDDLGGEVCKSLLRGESKETAFFIHGDVRVEDDISNAVDFAVKNFG 98          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: TS2_MAIZE (Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.913e-38
Identity = 83/198 (41.92%), Postives = 112/198 (56.57%), Query Frame = -3
Query:  194 GKLDIMYNNAGILDR---SFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGM---SMKGGVDPAL-----------------------IESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 700
            G+LD+  NNAG+L R   +  SIL    ++ +R++ VN +G  LG KHAAR M P++ G I+  AS    + GLG  AYT SK+ I+GL K  A EL  +G+RVNCVSP+G+AT M   + + G D A                        +E  +  +  LKG  L+   IA A L+LASDE+ Y+SG NLVVDGG
Sbjct:  129 GRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQGHDDATADADRDLDLDLDVTVPSDQEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGG 326          

HSP 2 Score: 40.817 bits (94), Expect = 1.913e-38
Identity = 19/40 (47.50%), Postives = 25/40 (62.50%), Query Frame = -2
Query:  699 DKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG 818
            D  GE LA  LG  V ++ CD+S ED+V   VD A+S+ G
Sbjct:   89 DAAGEALASALGPQVSFVRCDVSVEDDVRRAVDWALSRHG 128          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: BACC2_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.768e-21
Identity = 62/180 (34.44%), Postives = 97/180 (53.89%), Query Frame = -3
Query:  188 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKT---------DGIANAALYLASDESSYVSGQNLVVDGGFS 700
            G LD++ NNAGI       I +   S+  +++NVN  G FL +KHA + M+   KG I+ T S    +A    PAY  SK G+L L + +A +  ++ IRVNCV P  + T ++ K     + +E++   +  +K +  K          + IAN  L+LASD SSY++G  +  DGG++
Sbjct:   79 GGLDVLINNAGI--EIVAPIHEMELSNWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVGGVVAWPDIPAYNASKGGVLQLTRSMAVDYAKHNIRVNCVCPGIIDTPLNEK-----SFLENNEGTLEEIKKEKAKVNPLLRLGKPEEIANVMLFLASDLSSYMTGSAITADGGYT 251          

HSP 2 Score: 26.9498 bits (58), Expect = 1.768e-21
Identity = 14/38 (36.84%), Postives = 22/38 (57.89%), Query Frame = -2
Query:  699 GEDLADKLGQD-VCYIHCDISNEDEVINLVDTAVSKFG 809
            GE +  K   D + ++H DI++E    N + +AV KFG
Sbjct:   42 GEAMIRKENNDRLHFVHTDITDEPACQNAIRSAVDKFG 79          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: YGCW_ECOLI (Uncharacterized oxidoreductase ygcW OS=Escherichia coli (strain K12) GN=ygcW PE=3 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.802e-21
Identity = 60/172 (34.88%), Postives = 98/172 (56.98%), Query Frame = -3
Query:  185 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 700
            G +DI+ NNAGI       +LD  ++D + +I+VN    F  +  AA++M+PQ+ G I+   S  + + G  SPAY+ +K+ + G  K    ELGQY I+VN ++P   AT +++    +P   +  +  +     ++  T  +  AA++LAS  S+YV+G  LVVDGG+ V
Sbjct:   93 GTVDILVNNAGIC--KLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIP--ANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLV 260          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: HSD_MYCTU (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium tuberculosis GN=fabG3 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.018e-20
Identity = 58/169 (34.32%), Postives = 91/169 (53.85%), Query Frame = -3
Query:  194 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 700
            G L ++ NNAGIL+   G+I D   ++ +R+++VN  G FLG +   + M    +G I+  +S       +    YT +K+ + GL K  A ELG  GIRVN + P  + T M+    V   + ++++       G+  +   ++N  +YLASDESSY +G   VVDGG
Sbjct:   80 GGLHVLVNNAGILN--IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMT--DWVPEDIFQTAL-------GRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG 237          

HSP 2 Score: 30.0314 bits (66), Expect = 7.018e-20
Identity = 14/40 (35.00%), Postives = 23/40 (57.50%), Query Frame = -2
Query:  699 DKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG 818
            D+ G+ +A +L     Y+H D++   +    VDTAV+ FG
Sbjct:   41 DEEGKAVAAELADAARYVHLDVTQPAQWTAAVDTAVTAFG 80          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: HSD_MYCBO (3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase OS=Mycobacterium bovis GN=fabG3 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.018e-20
Identity = 58/169 (34.32%), Postives = 91/169 (53.85%), Query Frame = -3
Query:  194 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGG 700
            G L ++ NNAGIL+   G+I D   ++ +R+++VN  G FLG +   + M    +G I+  +S       +    YT +K+ + GL K  A ELG  GIRVN + P  + T M+    V   + ++++       G+  +   ++N  +YLASDESSY +G   VVDGG
Sbjct:   80 GGLHVLVNNAGILN--IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMT--DWVPEDIFQTAL-------GRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG 237          

HSP 2 Score: 30.0314 bits (66), Expect = 7.018e-20
Identity = 14/40 (35.00%), Postives = 23/40 (57.50%), Query Frame = -2
Query:  699 DKLGEDLADKLGQDVCYIHCDISNEDEVINLVDTAVSKFG 818
            D+ G+ +A +L     Y+H D++   +    VDTAV+ FG
Sbjct:   41 DEEGKAVAAELADAARYVHLDVTQPAQWTAAVDTAVTAFG 80          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: BACC_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 4.908e-19
Identity = 63/180 (35.00%), Postives = 96/180 (53.33%), Query Frame = -3
Query:  188 GKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKT---------DGIANAALYLASDESSYVSGQNLVVDGGFS 700
            G LD++ NNAGI       I +   SD  +++ VN  G FL +KHA + M+   KG I+ T S    +A    PAY  SK G+L L K +A +  ++ IRVNCV P  + T ++ K     + +E++   +  +K +  K          + IAN  L+LASD SSY++G  +  DGG++
Sbjct:   79 GGLDVLINNAGI--EIVAPIHEMELSDWNKVLQVNLTGMFLMSKHALKHMLAAGKGNIINTCSVGGLVAWPDIPAYNASKGGVLQLTKSMAVDYAKHQIRVNCVCPGIIDTPLNEK-----SFLENNEGTLEEIKKEKAKVNPLLRLGKPEEIANVMLFLASDLSSYMTGSAITADGGYT 251          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: YOHF_ECOLI (Uncharacterized oxidoreductase yohF OS=Escherichia coli (strain K12) GN=yohF PE=3 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.093e-18
Identity = 60/177 (33.90%), Postives = 103/177 (58.19%), Query Frame = -3
Query:  176 LGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGL-GSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSVVNP 703
            LG++D++ NNAG + ++    LD    +  ++  V+  G FL ++ AAR MV Q +G  +   ++  E   L  + AYT +K+ + GL K +A EL ++ I VN V+P  +AT M+   G+D + ++        L+ +F  T  IA+  ++L S+ ++Y +GQ+L+VDGGF + NP
Sbjct:   78 LGRIDVLVNNAGAMTKA--PFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALGGLTKAMALELVRHKILVNAVAPGAIATPMN---GMDDSDVKPDAEPSIPLR-RFGATHEIASLVVWLCSEGANYTTGQSLIVDGGFMLANP 248          
BLAST of CN181604 vs. ExPASy Swiss-Prot
Match: CBR4_XENTR (Carbonyl reductase family member 4 OS=Xenopus tropicalis GN=cbr4 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.154e-18
Identity = 63/174 (36.21%), Postives = 93/174 (53.45%), Query Frame = -3
Query:  185 NLGKLDIMYNNAGILDRSFGSILDTPKSDLERLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYGIRVNCVSPYGLATGMSMKGGVDPALIESSMSQMGNLKGQFLKTDGIANAALYLASDESSYVSGQNLVVDGGFSV 706
            NLG +D + N+AGI  R    +L T   D+  L++VN +G     K A R M+ QQ G I+   S       +G   Y  SK G++G  K LA E+ +  IRVN V+P  + T M++       L E S+++M  L G+F   + +A + L+L   ES Y++G  LVVDGG  +
Sbjct:   72 NLGNVDYLVNSAGI--RRDALLLRTRSEDIRSLLSVNLVGTIQTCKLALRSMIQQQGGAIVNIGSIVGHKGNIGQSIYGASKEGLIGFSKSLAKEVAKRNIRVNVVAPGFIHTDMTL------GLEEDSLTKMVPL-GRFGDPEEVAQSVLFLL--ESPYITGHVLVVDGGLQL 234          
The following BLAST results are available for this feature:
BLAST of CN181604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
MOMAS_ORYSJ2.285e-4952.27Momilactone A synthase OS=Oryza sativa subsp. japo... [more]
ABA2_ARATH2.782e-4044.26Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN... [more]
TS2_MAIZE1.913e-3841.92Sex determination protein tasselseed-2 OS=Zea mays... [more]
BACC2_BACSU1.768e-2134.44Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
YGCW_ECOLI1.802e-2134.88Uncharacterized oxidoreductase ygcW OS=Escherichia... [more]
HSD_MYCTU7.018e-2034.323-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
HSD_MYCBO7.018e-2034.323-alpha-(or 20-beta)-hydroxysteroid dehydrogenase ... [more]
BACC_BACSU4.908e-1935.00Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
YOHF_ECOLI1.093e-1833.90Uncharacterized oxidoreductase yohF OS=Escherichia... [more]
CBR4_XENTR4.154e-1836.21Carbonyl reductase family member 4 OS=Xenopus trop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001D06_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181604 ID=CN181604; Name=CN181604; organism=Citrus sinensis; type=EST; length=819bp
CCGGAACTGACTATTGTAATGTGGTTTCAAATATGATAATTGGAAGCAAA
TTTGTGAATTATTTTTCAGAATGAATGCATTATTACACGTACGCAGCAGA
GTACGGCATCCTCCATCATCTAGAAATTAAAGCTCCAATTGATTACTTGA
TAAGACCGTAAGCCCTCATAATTGTAGGATTCACGACGCTGAATCCTCCA
TCCACAACAAGATTTTGCCCGCTCACATAACTTGATTCATCACTAGCCAA
ATAGAGGGCAGCATTTGCAATGCCATCAGTTTTTAGAAATTGCCCTTTTA
GATTACCCATCTGGCTCATTGATGATTCTATTAGAGCCGGATCGACTCCA
CCTTTCATCGACATTCCTGTCGCCAAACCATAAGGCGAGACGCAATTTAC
TCTTATTCCATACTGTCCAAGCTCTGCTGCCAAGCACTTTACTAGTCCTA
AAATCCCATATTTGGATATTGTATAAGCAGGGGAGCCAAGCCCTGCAATT
TCTGTACAAGCACTAGCTGTAAACAGTATGCAACCTTTTTGCTGTGGCAC
CATGACTCTTGCAGCATGCTTGGCTCCTAAGAAACCACCTATAGTGTTTA
CATTAATTAAGCGTTCTAGATCAGACTTTGGAGTGTCCAAAATGCTCCCA
AAGCTGCGGTCAAGAATTCCTGCATTGTTGTACATGATATCGAGCTTTCC
CAAATTTAGAAACGGCGGTATCAACGAGATTGATGACTTCATCTTCATTT
GAGATATCACAATGGATGTAGCAAACATCTTGGCCCAGCTTATCAGCAAG
GTCTTCGCCAAGCTTATCC
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