CN181578

Overview
NameCN181578
Unique NameCN181578
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181578 vs. ExPASy Swiss-Prot
Match: MTAD_THEPX (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Thermoanaerobacter sp. (strain X514) GN=mtaD PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.342e-13
Identity = 34/89 (38.20%), Postives = 60/89 (67.42%), Query Frame = -2
Query:  345 GAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILTVDEREIISAARQASDELLKR 611
            GAK++LWD +IGS+E GKKAD+V++D       P H+ I++L Y  +  +V +V+ NG+ +M+N++I TVD  +++    + +  L++R
Sbjct:  343 GAKALLWDKEIGSIEVGKKADIVIIDIDKPHFYPHHNLISALAYTAQASDVDTVIINGKIIMENREIKTVDVEKVMYNVEKRAKNLIQR 431          
BLAST of CN181578 vs. ExPASy Swiss-Prot
Match: MTAD_THEP3 (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=mtaD PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.342e-13
Identity = 34/89 (38.20%), Postives = 60/89 (67.42%), Query Frame = -2
Query:  345 GAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITSLVYCMRTENVVSVMCNGQWVMKNKKILTVDEREIISAARQASDELLKR 611
            GAK++LWD +IGS+E GKKAD+V++D       P H+ I++L Y  +  +V +V+ NG+ +M+N++I TVD  +++    + +  L++R
Sbjct:  343 GAKALLWDKEIGSIEVGKKADIVIIDIDKPHFYPHHNLISALAYTAQASDVDTVIINGKIIMENREIKTVDVEKVMYNVEKRAKNLIQR 431          
BLAST of CN181578 vs. ExPASy Swiss-Prot
Match: MTAD_METS3 (5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=mtaD PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.528e-11
Identity = 34/87 (39.08%), Postives = 58/87 (66.67%), Query Frame = -2
Query:  354 GAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDRITS-LVYCMRTENVVSVMCNGQWVMKNKKILTVDEREIISAARQASDEL 611
            GA+ +  + +IGS+E GKKAD++++D  +  MVP     +S ++Y     NV + +C+G+ +M+N+K+ T+DE EI   AR+A +EL
Sbjct:  344 GAEVLGLEQEIGSIEVGKKADLILIDTNNANMVPDSSATSSNIIYSANGYNVDTTICDGKILMENRKLTTLDEEEIYKKARKAIEEL 430          
The following BLAST results are available for this feature:
BLAST of CN181578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MTAD_THEPX5.342e-1338.205-methylthioadenosine/S-adenosylhomocysteine deami... [more]
MTAD_THEP35.342e-1338.205-methylthioadenosine/S-adenosylhomocysteine deami... [more]
MTAD_METS38.528e-1139.085-methylthioadenosine/S-adenosylhomocysteine deami... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0001C14_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001C14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181578 ID=CN181578; Name=CN181578; organism=Citrus sinensis; type=EST; length=612bp
ACTAAAGAAGATCCACAGCCTCAGGTTATTTTTATTTCTATTATGTACTT
TCAACAAGAATTTTTACAATAAAAAGGCACGTTAAAATAAGCGAGGAATA
AATATAAAGACGAGCAGTAAATCTATTCTACTGCCACGAATTCCCAAATT
ATTTGAAGCGTTCAAAGGAAGGAAACATGGCAACAAATTGTCGCATATTA
CATTCATATACAACAACAAATGCTTTTCCGGAGGAAGAACAACGGTTGGA
ATACATTTTGAGATGATTCGAGCTTCTTTACAGACGGTCTGAATAAGCAA
GCTAGTTAGAGGACATTCATCCTGTTTGGAATTGTAATGCCTGCTCTCTT
CAGAAGTTCATCAGAAGCTTGTCTTGCAGCTGAAATAATCTCCCTCTCAT
CAACAGTTAAGATTTTCTTATTCTTCATAACCCACTGGCCATTGCACATT
ACAGAGACAACATTCTCAGTTCGCATGCAATATACAAGGCTGGTAATGCG
GTCATGAACAGGAACCATAGGCCAAGAAAAAGGATCGACCACAACCATGT
CAGCCTTTTTCCCAGCCTCAAGTGACCCTATATCATTGTCCCAGAGAACT
GATTTTGCACCA
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