CN181573

Overview
NameCN181573
Unique NameCN181573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length684
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN181573 vs. ExPASy Swiss-Prot
Match: JMT_BRARP (Jasmonate O-methyltransferase OS=Brassica rapa subsp. pekinensis GN=JMT PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.286e-52
Identity = 76/140 (54.29%), Postives = 93/140 (66.43%), Query Frame = 3
Query:  297 KQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVP-------DGLE-----SNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNM 680
            + LG   G+ G CF + VPGSFYGRLFPR S+H  HSS SL WLSQVP       DG+       N+G I+++ TSP      Y  QFQ DFS+FL+ RSEELV  GRMVL+FLGR S DP+++E CY WELLA AL ++
Sbjct:  125 ESLGFEHGSGGPCFVSAVPGSFYGRLFPRRSLHFVHSSSSLHWLSQVPCGEVNKKDGVVITADLDNRGKIYLSKTSPKSAHKVYALQFQTDFSVFLRSRSEELVPGGRMVLSFLGRSSPDPTTEESCYQWELLAQALMSL 264          

HSP 2 Score: 80.8777 bits (198), Expect = 2.286e-52
Identity = 40/88 (45.45%), Postives = 57/88 (64.77%), Query Frame = 2
Query:   44 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSP-TKVAIADLGCSSGPNTLLVASELIKVFSKLPKDTEKAI 304
            MEV+++LHMN G G TSYA NS+VQ  +IS+ + + +EA+ KL    S      IADLGCSSGPN+LL  S +++    L  D ++ +
Sbjct:    1 MEVMRILHMNKGNGETSYAKNSIVQSNIISLGRRVMDEALKKLMIRNSEILSFGIADLGCSSGPNSLLSISNIVETIQNLCHDLDRPV 88          
BLAST of CN181573 vs. ExPASy Swiss-Prot
Match: JMT_ARATH (Jasmonate O-methyltransferase OS=Arabidopsis thaliana GN=JMT PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 7.172e-51
Identity = 76/141 (53.90%), Postives = 91/141 (64.54%), Query Frame = 3
Query:  294 RKQLGSASGAAGQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVP------------DGLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNM 680
            ++ LG   G    CF + VPGSFYGRLFPR S+H  HSS SL WLSQVP              LE N G I+++ TSP     AY  QFQ DF +FL+ RSEELV  GRMVL+FLGR+S DP+++E CY WELLA AL +M
Sbjct:  121 KEGLGFGRGGGESCFVSAVPGSFYGRLFPRRSLHFVHSSSSLHWLSQVPCREAEKEDRTITADLE-NMGKIYISKTSPKSAHKAYALQFQTDFLVFLRSRSEELVPGGRMVLSFLGRRSLDPTTEESCYQWELLAQALMSM 260          

HSP 2 Score: 81.6481 bits (200), Expect = 7.172e-51
Identity = 41/88 (46.59%), Postives = 57/88 (64.77%), Query Frame = 2
Query:   44 MEVVQVLHMNGGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTSP-TKVAIADLGCSSGPNTLLVASELIKVFSKLPKDTEKAI 304
            MEV++VLHMN G G TSYA NS  Q  +IS+ + + +EA+ KL  S S  + + IADLGCSSGPN+LL  S ++     L  D ++ +
Sbjct:    1 MEVMRVLHMNKGNGETSYAKNSTAQSNIISLGRRVMDEALKKLMMSNSEISSIGIADLGCSSGPNSLLSISNIVDTIHNLCPDLDRPV 88          
BLAST of CN181573 vs. ExPASy Swiss-Prot
Match: BAMT_ANTMA (Benzoate carboxyl methyltransferase OS=Antirrhinum majus GN=BAMT PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 5.599e-41
Identity = 72/120 (60.00%), Postives = 90/120 (75.00%), Query Frame = 3
Query:  327 GQCFFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLE-SNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLTFLGRKSQDPSSKECCYIWELLATALNNMV 683
            G CF  G+PGSFYGRL P+ S+H  +SSYS+ WLSQVP+GLE +N+ NI+MA+ SPP V  AY +Q++RDFS FLK R EE+V  GRMVLTF GR  +DPSSK+   I+ LLA  L +MV
Sbjct:  119 GNCFVYGLPGSFYGRLLPKKSLHFAYSSYSIHWLSQVPEGLEDNNRQNIYMATESPPEVYKAYAKQYERDFSTFLKLRGEEIVPGGRMVLTFNGRSVEDPSSKDDLAIFTLLAKTLVDMV 238          

HSP 2 Score: 45.4394 bits (106), Expect = 5.599e-41
Identity = 33/86 (38.37%), Postives = 48/86 (55.81%), Query Frame = 2
Query:   56 QVLHMN-GGVGGTSYASNSLVQEKVISIAKPITEEAMTKLFCSTS--PTKVAIADLGCSSGPNTLLVASELIKVFSKLPKDTEKAI 304
            ++L MN  G G TSYA+NS +Q+ ++S +  + +E +  +       P    + D+GCSSGPN LLV S +I     L   TEK I
Sbjct:    6 KLLCMNIAGDGETSYANNSGLQKVMMSKSLHVLDETLKDIIGDHVGFPKCFKMMDMGCSSGPNALLVMSGIINTIEDL--YTEKNI 89          
BLAST of CN181573 vs. ExPASy Swiss-Prot
Match: MT810_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g38100 OS=Arabidopsis thaliana GN=At5g38100 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.878e-20
Identity = 41/91 (45.05%), Postives = 54/91 (59.34%), Query Frame = 3
Query:  336 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKG-----NIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVL 593
            F  GVPGSFYGR+ PRNS+H+ H+SY+  WLS+VPD +   K      N    +     V  AY  QF +D  +FL  R+EELV  G M++
Sbjct:  126 FSVGVPGSFYGRVLPRNSIHIGHTSYTTHWLSKVPDNVCDKKSMAWNKNYIQCNNLLEEVTKAYKVQFIKDMEIFLDARAEELVPGGLMIV 216          

HSP 2 Score: 37.7354 bits (86), Expect = 6.878e-20
Identity = 29/84 (34.52%), Postives = 39/84 (46.43%), Query Frame = 2
Query:   68 MNGGVGGTSYASNSLVQEKVISIAKPITEEAMTK---LFCSTSPTKVAIADLGCSSGPNTLLVASELIKVF--SKLPKDTEKAI 304
            M+ G    SY  NS  Q+  IS A   T   + +   L  S+      IAD GCS GPNT  VA  +I      +L + TE ++
Sbjct:   10 MSSGHDQHSYIHNSSYQKAAISSAVEKTRRCIFEKLDLQLSSDFGTFRIADFGCSIGPNTFHVAQSIIDTVKSKRLEESTENSL 93          
BLAST of CN181573 vs. ExPASy Swiss-Prot
Match: MT878_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g38780 OS=Arabidopsis thaliana GN=At5g38780 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.889e-17
Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 3
Query:  336 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPD------GLESNKGNIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMV 590
            F  GVPGSFYGR+ PRNS+H+ ++S++  WLS+VP+       L  NK N    +     V  AY  QF++D  +FLK R+EELV  G M+
Sbjct:  128 FSVGVPGSFYGRVLPRNSIHIGNTSFTTHWLSKVPEEVCDKNSLAWNK-NYIHCNNLIEEVTEAYKVQFEKDMGVFLKARAEELVPGGLMI 217          

HSP 2 Score: 33.4982 bits (75), Expect = 2.889e-17
Identity = 27/86 (31.40%), Postives = 40/86 (46.51%), Query Frame = 2
Query:   68 MNGGVGGTSYASNSLVQEKVIS----IAKPITEEAMTKLFCSTSPTKVAIADLGCSSGPNTLLVASELIKVFS-KLPKDTEKAIRV 310
            M+GG    SY  NS  Q+  I      A+    E +  L  + + +   IAD GCS GPNT      +I +   K  K++++  RV
Sbjct:   10 MSGGDDQHSYIHNSSYQKAGIDGVQEKARQYILENLDLLNMNPNLSTFTIADFGCSIGPNTFHAVQNIIDIVKLKHLKESQEDSRV 95          
BLAST of CN181573 vs. ExPASy Swiss-Prot
Match: MT797_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g37970 OS=Arabidopsis thaliana GN=At5g37970 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.937e-14
Identity = 40/92 (43.48%), Postives = 57/92 (61.96%), Query Frame = 3
Query:  336 FFTGVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKG-----NIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLT 596
            F  GVPGSF+GR+ P+NS+H+ H+SY+L WLS VP  +   K      +    +     V  AY  QF++DF  FL+ R+EELV+ G M+L+
Sbjct:  129 FSVGVPGSFHGRVLPKNSLHIGHTSYTLHWLSNVPQHVCDKKSPALNKSYIQCNNLVDEVTKAYKIQFRKDFGGFLEARAEELVSGGLMILS 220          
BLAST of CN181573 vs. ExPASy Swiss-Prot
Match: MT799_ARATH (Probable S-adenosylmethionine-dependent methyltransferase At5g37990 OS=Arabidopsis thaliana GN=At5g37990 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12
Identity = 37/89 (41.57%), Postives = 53/89 (59.55%), Query Frame = 3
Query:  345 GVPGSFYGRLFPRNSVHLFHSSYSLQWLSQVPDGLESNKG-----NIFMASTSPPCVLTAYYEQFQRDFSLFLKCRSEELVAEGRMVLT 596
            GVPGSF+GR+ P+NS+H+ H +Y+L WLS VP  +   K      +    +     V  AY  QF++D   FL  R+EELV+ G M+L+
Sbjct:  132 GVPGSFHGRVLPKNSLHIGHITYALHWLSTVPQHVCDKKSPALNKSYIQCNNLVEEVTEAYRVQFKKDMGDFLGARAEELVSGGLMILS 220          
The following BLAST results are available for this feature:
BLAST of CN181573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
JMT_BRARP2.286e-5254.29Jasmonate O-methyltransferase OS=Brassica rapa sub... [more]
JMT_ARATH7.172e-5153.90Jasmonate O-methyltransferase OS=Arabidopsis thali... [more]
BAMT_ANTMA5.599e-4160.00Benzoate carboxyl methyltransferase OS=Antirrhinum... [more]
MT810_ARATH6.878e-2045.05Probable S-adenosylmethionine-dependent methyltran... [more]
MT878_ARATH2.889e-1745.05Probable S-adenosylmethionine-dependent methyltran... [more]
MT797_ARATH5.937e-1443.48Probable S-adenosylmethionine-dependent methyltran... [more]
MT799_ARATH9.479e-1241.57Probable S-adenosylmethionine-dependent methyltran... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0001C10_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181573 ID=CN181573; Name=CN181573; organism=Citrus sinensis; type=EST; length=684bp
GAGGCAAACGAGTGAGCGAGAAACAGAGAATACTGTGCGAGAGATGGAGG
TGGTCCAAGTGCTTCACATGAATGGAGGAGTAGGAGGCACAAGTTATGCC
AGTAATTCACTGGTTCAGGAAAAAGTCATATCCATTGCAAAGCCAATCAC
AGAGGAAGCCATGACCAAACTCTTCTGCAGCACGTCCCCAACAAAGGTAG
CAATTGCCGACTTGGGCTGTTCTTCAGGACCAAACACTTTGCTTGTGGCA
TCTGAACTTATCAAAGTCTTTAGCAAGCTTCCAAAAGATACTGAGAAAGC
AATTAGGGTCGGCCTCTGGGGCAGCTGGGCAGTGCTTCTTCACTGGGGTC
CCTGGTTCTTTCTATGGCAGGCTTTTCCCTCGCAATAGTGTGCATCTTTT
CCACTCTTCTTATAGTCTCCAATGGCTATCTCAAGTTCCAGATGGACTGG
AGAGCAATAAAGGGAACATTTTCATGGCCAGTACAAGTCCGCCATGCGTG
CTTACGGCATATTACGAGCAATTTCAAAGAGATTTTTCATTGTTTCTCAA
GTGTCGTTCAGAGGAATTGGTGGCAGAAGGGCGCATGGTTTTAACATTTC
TAGGAAGAAAAAGCCAAGATCCCTCAAGCAAAGAGTGCTGCTACATTTGG
GAGCTCTTGGCCACGGCTCTCAACAATATGGTCT
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