CN181568
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181568 vs. ExPASy Swiss-Prot
Match: RL5_CUCSA (60S ribosomal protein L5 OS=Cucumis sativus GN=RPL5 PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 4.748e-49 Identity = 92/113 (81.42%), Postives = 103/113 (91.15%), Query Frame = -1 Query: 208 KDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEEDE 546 K+G+QLD EVHRKYI+GGHVAAYM TLMEDEPEKYQSHF+EYIKKGI+AD LE LYKKVHAAIRA+P KKS+KP PK HKRYNLKKLTY+ERKA+LVERLNALNSA D +D+ Sbjct: 184 KNGQQLDVEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSEYIKKGIEADELEGLYKKVHAAIRANPIAKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAADGDDD 296
BLAST of CN181568 vs. ExPASy Swiss-Prot
Match: RL51_ORYSJ (60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica GN=RPL5A PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 2.438e-45 Identity = 84/113 (74.34%), Postives = 99/113 (87.61%), Query Frame = -1 Query: 208 KDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEEDE 546 KD KQLD+++HRKYIYGGHVA YM ++ E+EPEK+Q+HF+EY+KKGIDADG+EALYKKVHAAIRADPTM KS K P HKRYNLKKLTYE+RKA LVERLNALNS+ +D+ Sbjct: 185 KDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAGADDD 297
BLAST of CN181568 vs. ExPASy Swiss-Prot
Match: RL51_ORYSI (60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica GN=RPL5A PE=2 SV=2) HSP 1 Score: 181.415 bits (459), Expect = 2.438e-45 Identity = 84/113 (74.34%), Postives = 99/113 (87.61%), Query Frame = -1 Query: 208 KDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEEDE 546 KD KQLD+++HRKYIYGGHVA YM ++ E+EPEK+Q+HF+EY+KKGIDADG+EALYKKVHAAIRADPTM KS K P HKRYNLKKLTYE+RKA LVERLNALNS+ +D+ Sbjct: 185 KDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAGADDD 297
BLAST of CN181568 vs. ExPASy Swiss-Prot
Match: RL52_ORYSJ (60S ribosomal protein L5-2 OS=Oryza sativa subsp. japonica GN=RPL5B PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 5.432e-45 Identity = 83/113 (73.45%), Postives = 99/113 (87.61%), Query Frame = -1 Query: 208 KDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEEDE 546 KD KQLD+++HRKYIYGGHVA YM ++ E+EPEK+Q+HF+EY+KKGIDADG+E+LYKKVHAAIRADPTM KS K P HKRYNLKKLTYE+RKA LVERLNALNS+ +D+ Sbjct: 185 KDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMESLYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAGADDD 297
BLAST of CN181568 vs. ExPASy Swiss-Prot
Match: RL5_SOLME (60S ribosomal protein L5 (Fragment) OS=Solanum melongena GN=RPL5 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.210e-44 Identity = 85/113 (75.22%), Postives = 96/113 (84.96%), Query Frame = -1 Query: 208 KDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEEDE 546 KD KQLDAEVHRKYIYGGHVAAYM+ LMEDEPEKYQSHF+ YIK + D +E +YKKVHAAIR DP+ KKS+K PK HKRYNLKKLTYEERKAKL+ERLNALN+A +D+ Sbjct: 3 KDSKQLDAEVHRKYIYGGHVAAYMNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKKVHAAIRPDPSPKKSQKQPPKTHKRYNLKKLTYEERKAKLIERLNALNAAGGNDDD 115
BLAST of CN181568 vs. ExPASy Swiss-Prot
Match: RL51_ARATH (60S ribosomal protein L5-1 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 2.523e-42 Identity = 79/113 (69.91%), Postives = 95/113 (84.07%), Query Frame = -1 Query: 208 KDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEEDE 546 K+ KQLDAE+HR YIYGGHV+ YM L EDEPEK Q+HF+ YIKKG++A+ +E LYKKVHAAIRADP KK+ KPAPK+HKRYNLKKLTYEERK KL+ER+ ALN A ++D+ Sbjct: 184 KENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEELYKKVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGAGGDDDD 296
BLAST of CN181568 vs. ExPASy Swiss-Prot
Match: RL52_ARATH (60S ribosomal protein L5-2 OS=Arabidopsis thaliana GN=RPL5B PE=2 SV=3) HSP 1 Score: 169.859 bits (429), Expect = 7.341e-42 Identity = 78/113 (69.03%), Postives = 95/113 (84.07%), Query Frame = -1 Query: 208 KDGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEEDE 546 K+ KQLDAE+HR YIYGGHV+ YM L EDEPEK Q+HF+ YIKKG++A+ +E +YKKVHAAIRA+P KK+EK APKEHKRYNLKKLTYEERK KL+ER+ ALN A ++D+ Sbjct: 184 KENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGAGGDDDD 296
BLAST of CN181568 vs. ExPASy Swiss-Prot
Match: RL5_NEUCR (60S ribosomal protein L5 OS=Neurospora crassa GN=rpl-5 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 7.632e-23 Identity = 56/113 (49.56%), Postives = 75/113 (66.37%), Query Frame = -1 Query: 229 DGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHK--------RYNLKKLTYEERKAKLVERLNALNS 543 + ++LDAE +KYI+GGHVA YM TL +D+ E+Y+S F YI+ ++ADGLE LY + HAAIR DP KK+E APK+ K +Y KLT E+R A + ER+ AL S Sbjct: 189 ESEELDAETLKKYIFGGHVAEYMETLADDDEERYKSQFNRYIEDDLEADGLEDLYAEAHAAIREDP-FKKAESEAPKKTKEEWKAESLKYKKSKLTREQRAAGVQERIAALRS 300
BLAST of CN181568 vs. ExPASy Swiss-Prot
Match: RL5_LYSTE (60S ribosomal protein L5 OS=Lysiphlebus testaceipes GN=RpL5 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.207e-21 Identity = 48/111 (43.24%), Postives = 70/111 (63.06%), Query Frame = -1 Query: 211 DGKQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYNLKKLTYEERKAKLVERLNALNSAVDEED 543 + K +A+VHR++I+ H+A YM TL E+EPE +Q F++YIK GI ADG+E +YKK H AIRADP + K KR+N KLT ERK ++ + + ++E + Sbjct: 186 ESKSFNADVHRQHIFAHHIANYMKTLEENEPENFQRQFSQYIKNGITADGIEEMYKKAHEAIRADPDRAEIVKTKEPVKKRWNRAKLTLSERKDRVKQIKASFQKKLEETE 296
BLAST of CN181568 vs. ExPASy Swiss-Prot
Match: RL5_DUNSA (60S ribosomal protein L5 OS=Dunaliella salina GN=RPL5 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.219e-20 Identity = 43/81 (53.09%), Postives = 60/81 (74.07%), Query Frame = -1 Query: 295 KQLDAEVHRKYIYGGHVAAYMSTLMEDEPEKYQSHFTEYIKKGIDADGLEALYKKVHAAIRADPTMKKSEKPAPKEHKRYN 537 K+LD EV +KYIYGGHVA Y T+ E+EPEKYQ+HF+ Y++ I+ DG+E +YK+VHA IR +P K E+ P + KR++ Sbjct: 186 KKLDTEVLQKYIYGGHVAEYQETMQEEEPEKYQAHFSSYVENEIEPDGIEDMYKEVHAKIRENPCPPKKERTKPADAKRWS 266 The following BLAST results are available for this feature:
BLAST of CN181568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181568 ID=CN181568; Name=CN181568; organism=Citrus sinensis; type=EST; length=546bpback to top |