CN181559

Overview
NameCN181559
Unique NameCN181559
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2575 contig Csv1_Contig2575:261..887. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181559 vs. ExPASy Swiss-Prot
Match: FBRL2_ARATH (rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabidopsis thaliana GN=FIB2 PE=1 SV=2)

HSP 1 Score: 387.111 bits (993), Expect = 3.869e-107
Identity = 192/206 (93.20%), Postives = 199/206 (96.60%), Query Frame = 1
Query:    7 HEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV 624
            H GVFIAKGKEDALVTKNLV GEAVYNEKRISVQNEDGTK EYR+WNPFRSKLAAA+LGGVDNIWIKPG +VLYLGAASGTTVSHVSD+VGP G VYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLK+GGHFVISIKANCIDSTVPAEAVFQ+EVKKLQQ+QFKP EQV
Sbjct:   87 HAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKTEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKSGGHFVISIKANCIDSTVPAEAVFQTEVKKLQQEQFKPAEQV 292          
BLAST of CN181559 vs. ExPASy Swiss-Prot
Match: FBRL1_ARATH (rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabidopsis thaliana GN=FIB1 PE=1 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.920e-106
Identity = 192/206 (93.20%), Postives = 198/206 (96.12%), Query Frame = 1
Query:    7 HEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV 624
            H GVFIAKGKEDALVTKNLV GEAVYNEKRISVQNEDGTKVEYR+WNPFRSKLAAA+LGGVDNIWIKPG +VLYLGAASGTTVSHVSD+VGP G VYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNAS+FLK GGHFVISIKANCIDSTV AEAVFQSEVKKLQQ+QFKP EQV
Sbjct:   76 HAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASFFLKTGGHFVISIKANCIDSTVAAEAVFQSEVKKLQQEQFKPAEQV 281          
BLAST of CN181559 vs. ExPASy Swiss-Prot
Match: FBRL_RAT (rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus GN=Fbl PE=1 SV=2)

HSP 1 Score: 329.331 bits (843), Expect = 9.573e-90
Identity = 162/206 (78.64%), Postives = 182/206 (88.35%), Query Frame = 1
Query:    7 HEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV 624
            HEGVFI +GKEDALVTKNLV GE+VY EKR+S+   D  K+EYR WNPFRSKLAAA+LGGVD I IKPG +VLYLGAASGTTVSHVSDIVGP+G+VYAVEFSHRSGRDL+N+AKKRTN+IP+IEDARHP KYRML+ MVDVIF+DVAQPDQ RI+ALNA  FL+ GGHFVISIKANCIDST  AEAVF SEVKK+QQ+  KP EQ+
Sbjct:   99 HEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDD-KIEYRAWNPFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQL 303          
BLAST of CN181559 vs. ExPASy Swiss-Prot
Match: FBRL_MOUSE (rRNA 2'-O-methyltransferase fibrillarin OS=Mus musculus GN=Fbl PE=1 SV=2)

HSP 1 Score: 329.331 bits (843), Expect = 9.573e-90
Identity = 162/206 (78.64%), Postives = 182/206 (88.35%), Query Frame = 1
Query:    7 HEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV 624
            HEGVFI +GKEDALVTKNLV GE+VY EKR+S+   D  K+EYR WNPFRSKLAAA+LGGVD I IKPG +VLYLGAASGTTVSHVSDIVGP+G+VYAVEFSHRSGRDL+N+AKKRTN+IP+IEDARHP KYRML+ MVDVIF+DVAQPDQ RI+ALNA  FL+ GGHFVISIKANCIDST  AEAVF SEVKK+QQ+  KP EQ+
Sbjct:   99 HEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDD-KIEYRAWNPFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQL 303          
BLAST of CN181559 vs. ExPASy Swiss-Prot
Match: FBRL_HUMAN (rRNA 2'-O-methyltransferase fibrillarin OS=Homo sapiens GN=FBL PE=1 SV=2)

HSP 1 Score: 329.331 bits (843), Expect = 9.573e-90
Identity = 162/206 (78.64%), Postives = 182/206 (88.35%), Query Frame = 1
Query:    7 HEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV 624
            HEGVFI +GKEDALVTKNLV GE+VY EKR+S+   D  K+EYR WNPFRSKLAAA+LGGVD I IKPG +VLYLGAASGTTVSHVSDIVGP+G+VYAVEFSHRSGRDL+N+AKKRTN+IP+IEDARHP KYRML+ MVDVIF+DVAQPDQ RI+ALNA  FL+ GGHFVISIKANCIDST  AEAVF SEVKK+QQ+  KP EQ+
Sbjct:   93 HEGVFICRGKEDALVTKNLVPGESVYGEKRVSISEGDD-KIEYRAWNPFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQL 297          
BLAST of CN181559 vs. ExPASy Swiss-Prot
Match: FBRL_XENLA (rRNA 2'-O-methyltransferase fibrillarin OS=Xenopus laevis GN=fbl PE=2 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 3.638e-89
Identity = 163/207 (78.74%), Postives = 183/207 (88.41%), Query Frame = 1
Query:    7 HEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDG-TKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV 624
            HEG+FI +GKEDALVTKNLV GE+VY EKRISV  EDG  K EYR WNPFRSK+AAA+LGGVD I IKPGV+VLYLGAASGTTVSHVSD+VGP G+VYAVEFSHRSGRDL+N+AKKRTN+IP+IEDARHP KYR+LVGMVDV+F+DVAQPDQ RI+ALNA  FLK GGHFVISIKANCIDST   EAVF +EVKK+QQ+  KP EQ+
Sbjct:   95 HEGIFICRGKEDALVTKNLVPGESVYGEKRISV--EDGEVKTEYRAWNPFRSKIAAAILGGVDQIHIKPGVKVLYLGAASGTTVSHVSDVVGPEGLVYAVEFSHRSGRDLINVAKKRTNIIPVIEDARHPHKYRILVGMVDVVFADVAQPDQTRIVALNAHNFLKNGGHFVISIKANCIDSTAAPEAVFAAEVKKMQQENMKPQEQL 299          
BLAST of CN181559 vs. ExPASy Swiss-Prot
Match: FBRL_DROER (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila erecta GN=Fib PE=3 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 1.058e-88
Identity = 161/206 (78.16%), Postives = 182/206 (88.35%), Query Frame = 1
Query:    7 HEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV 624
            HEGVFIA+GKEDALVT+N V G  VY EKRISV+N +G K+EYR+WNPFRSKLAAAVLGGV+ I + PG +VLYLGAASGTTVSHVSD+VGP G+VYAVEFSHRSGRDL+N+AKKRTN+IPIIEDARHP KYRMLVGMVD IF+DVAQPDQ RI+ALNA +FLK GGHFVISIKA+CIDST   EAVF SEVKK+Q D+ KP EQ+
Sbjct:  119 HEGVFIARGKEDALVTRNFVPGSEVYGEKRISVEN-NGEKIEYRVWNPFRSKLAAAVLGGVEQIHMPPGSKVLYLGAASGTTVSHVSDVVGPEGLVYAVEFSHRSGRDLINVAKKRTNIIPIIEDARHPHKYRMLVGMVDTIFADVAQPDQGRIVALNAQHFLKNGGHFVISIKASCIDSTAQPEAVFASEVKKMQADKLKPQEQL 323          
BLAST of CN181559 vs. ExPASy Swiss-Prot
Match: FBRL_SCHPO (rRNA 2'-O-methyltransferase fibrillarin OS=Schizosaccharomyces pombe GN=fib1 PE=1 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 6.861e-88
Identity = 157/206 (76.21%), Postives = 183/206 (88.83%), Query Frame = 1
Query:    7 HEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV 624
            H GVFIA+GKED LVT+NLV GE+VYNEKRISV + DGTKVEYR+WNPFRSKLAA +LGG+DNI+IKPG RVLYLGAA+GT+VSHV+D+VGP G+VYAVEFSHRSGRDL+NMAKKRTNVIPI+EDARH  KYRMLVGMVDV+F+DVAQPDQARI+ALNA+ FLK  G  VIS+KA+CIDST  A  VF  EVKK+Q+++ KP EQ+
Sbjct:   80 HAGVFIARGKEDLLVTRNLVPGESVYNEKRISVDSPDGTKVEYRVWNPFRSKLAAGILGGLDNIYIKPGARVLYLGAANGTSVSHVADVVGPEGLVYAVEFSHRSGRDLLNMAKKRTNVIPIVEDARHVQKYRMLVGMVDVVFADVAQPDQARIVALNAAAFLKNEGGVVISVKASCIDSTADAAVVFAREVKKMQEEKIKPQEQL 285          
BLAST of CN181559 vs. ExPASy Swiss-Prot
Match: FBRL_DROME (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila melanogaster GN=Fib PE=1 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 1.170e-87
Identity = 159/206 (77.18%), Postives = 181/206 (87.86%), Query Frame = 1
Query:    7 HEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV 624
            HEGVFIA+GKEDALVT+N V G  VY EKRISV+  +G K+EYR+WNPFRSKLAAAVLGGV+ I + PG +VLYLGAASGTTVSHVSD+VGP G+VYAVEFSHRSGRDL+N+AKKRTN+IPIIEDARHP KYRMLVGMVD IF+DVAQPDQ RI+ALNA +FLK GGHFVISIKA+CIDST   EAVF +EVKK+Q D+ KP EQ+
Sbjct:  118 HEGVFIARGKEDALVTRNFVPGSEVYGEKRISVET-NGEKIEYRVWNPFRSKLAAAVLGGVEQIHMPPGSKVLYLGAASGTTVSHVSDVVGPEGLVYAVEFSHRSGRDLINVAKKRTNIIPIIEDARHPHKYRMLVGMVDTIFADVAQPDQGRIVALNAQHFLKNGGHFVISIKASCIDSTAQPEAVFAAEVKKMQADKLKPQEQL 322          
BLAST of CN181559 vs. ExPASy Swiss-Prot
Match: FBLL1_MOUSE (rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 OS=Mus musculus GN=Fbll1 PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.095e-85
Identity = 156/206 (75.73%), Postives = 181/206 (87.86%), Query Frame = 1
Query:    7 HEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQDQFKPFEQV 624
            HEGVFI +G EDALVT N+V G +VY EKR++V  E+G K EYR WNPFRSKLAAA+LGGVD I IKP  +VLYLGAASGTTVSHVSDI+GP+G+VYAVEFSHR+GRDLVN+AKKRTN+IP++EDARHP KYRML+GMVDVIF+DVAQPDQ+RI+ALNA  FL+ GGHF+ISIKANCIDST  AEAVF SEV+KLQQ+  KP EQ+
Sbjct:   87 HEGVFIYRGAEDALVTLNMVPGVSVYGEKRVTVM-ENGEKQEYRTWNPFRSKLAAAILGGVDQIHIKPKSKVLYLGAASGTTVSHVSDIIGPDGLVYAVEFSHRAGRDLVNVAKKRTNIIPVLEDARHPLKYRMLIGMVDVIFADVAQPDQSRIVALNAHTFLRNGGHFLISIKANCIDSTASAEAVFASEVRKLQQENLKPQEQL 291          
The following BLAST results are available for this feature:
BLAST of CN181559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
FBRL2_ARATH3.869e-10793.20rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabi... [more]
FBRL1_ARATH1.920e-10693.20rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabi... [more]
FBRL_RAT9.573e-9078.64rRNA 2'-O-methyltransferase fibrillarin OS=Rattus ... [more]
FBRL_MOUSE9.573e-9078.64rRNA 2'-O-methyltransferase fibrillarin OS=Mus mus... [more]
FBRL_HUMAN9.573e-9078.64rRNA 2'-O-methyltransferase fibrillarin OS=Homo sa... [more]
FBRL_XENLA3.638e-8978.74rRNA 2'-O-methyltransferase fibrillarin OS=Xenopus... [more]
FBRL_DROER1.058e-8878.16rRNA 2'-O-methyltransferase fibrillarin OS=Drosoph... [more]
FBRL_SCHPO6.861e-8876.21rRNA 2'-O-methyltransferase fibrillarin OS=Schizos... [more]
FBRL_DROME1.170e-8777.18rRNA 2'-O-methyltransferase fibrillarin OS=Drosoph... [more]
FBLL1_MOUSE1.095e-8575.73rRNA/tRNA 2'-O-methyltransferase fibrillarin-like ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001B24_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001B24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181559 ID=CN181559; Name=CN181559; organism=Citrus sinensis; type=EST; length=626bp
GAGGGACACGAAGGAGTGTTCATTGCCAAGGGCAAAGAAGACGCCCTTGT
CACTAAGAATCTCGTCGCCGGTGAGGCTGTCTACAATGAGAAGAGGATCT
CCGTCCAGAATGAAGATGGAACCAAAGTTGAGTATAGAATTTGGAATCCC
TTCCGTTCCAAATTAGCTGCAGCTGTTCTTGGTGGTGTTGATAATATTTG
GATTAAACCTGGTGTTAGGGTTCTATACCTTGGTGCTGCTTCCGGCACAA
CTGTCTCACATGTTTCGGACATTGTTGGCCCTAATGGAGTAGTTTATGCA
GTGGAATTTTCTCATAGAAGTGGTAGAGACTTGGTCAATATGGCAAAGAA
GAGAACCAATGTTATACCCATAATTGAAGATGCTAGACATCCTGCCAAGT
ACCGTATGTTGGTCGGTATGGTAGATGTAATATTTTCTGACGTTGCCCAA
CCGGATCAGGCGAGGATTTTAGCCCTGAATGCATCATATTTTCTCAAAGC
TGGAGGTCATTTTGTTATTTCTATCAAGGCAAACTGCATAGATTCCACTG
TTCCTGCTGAGGCAGTGTTCCAGAGTGAAGTTAAGAAGCTGCAACAGGAT
CAGTTCAAACCCTTTGAGCAAGTGAC
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